RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 KRTAP4-3Q9BYR4 195 aa6.86□□□□□ -1.31
CXCL3-201ENST00000296026 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
CXCL3-201ENST00000296026 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
CXCL3-201ENST00000296026 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
CXCL3-201ENST00000296026 KRTAP5-4Q6L8H1 288 aa6.82□□□□□ -1.32
CXCL3-201ENST00000296026 COX7CP15954 63 aa6.8□□□□□ -1.32
CXCL3-201ENST00000296026 A8MU10 97 aa6.79□□□□□ -1.32
CXCL3-201ENST00000296026 A0A1B0GU69 56 aa6.78□□□□□ -1.32
CXCL3-201ENST00000296026 H7BZZ5 65 aa6.78□□□□□ -1.32
CXCL3-201ENST00000296026 TNP1P09430 55 aa6.77□□□□□ -1.33
CXCL3-201ENST00000296026 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
CXCL3-201ENST00000296026 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
CXCL3-201ENST00000296026 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
CXCL3-201ENST00000296026 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
CXCL3-201ENST00000296026 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
CXCL3-201ENST00000296026 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
CXCL3-201ENST00000296026 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.38
CXCL3-201ENST00000296026 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
CXCL3-201ENST00000296026 PCP4P48539 62 aa6.42□□□□□ -1.38
CXCL3-201ENST00000296026 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
CXCL3-201ENST00000296026 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
CXCL3-201ENST00000296026 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
CXCL3-201ENST00000296026 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
CXCL3-201ENST00000296026 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
CXCL3-201ENST00000296026 UQCR11O14957 56 aa6.26□□□□□ -1.41
CXCL3-201ENST00000296026 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
CXCL3-201ENST00000296026 TMEM258P61165 79 aa6.19□□□□□ -1.42
CXCL3-201ENST00000296026 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.43
CXCL3-201ENST00000296026 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
CXCL3-201ENST00000296026 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
CXCL3-201ENST00000296026 K7ERS5 55 aa6.03□□□□□ -1.44
CXCL3-201ENST00000296026 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
CXCL3-201ENST00000296026 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
CXCL3-201ENST00000296026 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
CXCL3-201ENST00000296026 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
CXCL3-201ENST00000296026 MT1AP04731 61 aa5.91□□□□□ -1.46
CXCL3-201ENST00000296026 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
CXCL3-201ENST00000296026 PSPHP1O15172 72 aa5.82□□□□□ -1.48
CXCL3-201ENST00000296026 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
CXCL3-201ENST00000296026 V9GYY9 64 aa5.76□□□□□ -1.49
CXCL3-201ENST00000296026 Q1T7F1 81 aa5.72□□□□□ -1.49
CXCL3-201ENST00000296026 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
CXCL3-201ENST00000296026 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
CXCL3-201ENST00000296026 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
CXCL3-201ENST00000296026 A6NED7 52 aa5.6□□□□□ -1.51
CXCL3-201ENST00000296026 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
CXCL3-201ENST00000296026 ROMO1P60602 79 aa5.57□□□□□ -1.52
CXCL3-201ENST00000296026 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CXCL3-201ENST00000296026 AHNAKQ09666 5890 aaKnown RBP5.52□□□□□ -1.53
CXCL3-201ENST00000296026 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
CXCL3-201ENST00000296026 MT3P25713 68 aa5.42□□□□□ -1.54
CXCL3-201ENST00000296026 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
CXCL3-201ENST00000296026 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
CXCL3-201ENST00000296026 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
CXCL3-201ENST00000296026 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
CXCL3-201ENST00000296026 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
CXCL3-201ENST00000296026 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
CXCL3-201ENST00000296026 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
CXCL3-201ENST00000296026 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
CXCL3-201ENST00000296026 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
CXCL3-201ENST00000296026 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
CXCL3-201ENST00000296026 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
CXCL3-201ENST00000296026 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
CXCL3-201ENST00000296026 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
CXCL3-201ENST00000296026 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
CXCL3-201ENST00000296026 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
CXCL3-201ENST00000296026 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
CXCL3-201ENST00000296026 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
CXCL3-201ENST00000296026 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
CXCL3-201ENST00000296026 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
CXCL3-201ENST00000296026 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
CXCL3-201ENST00000296026 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
CXCL3-201ENST00000296026 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
CXCL3-201ENST00000296026 INE1O15225 51 aa3.06□□□□□ -1.92
CXCL3-201ENST00000296026 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
CXCL3-201ENST00000296026 PRM1P04553 51 aa2.83□□□□□ -1.96
CXCL3-201ENST00000296026 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms