RNA–Protein interactions for RNA: ENST00000295901.8

PSMD6-201, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD6, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-201ENST00000295901 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
PSMD6-201ENST00000295901 KRTAP2-2Q9BYT5 123 aa7.36□□□□□ -1.23
PSMD6-201ENST00000295901 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
PSMD6-201ENST00000295901 KRTAP19-7Q3SYF9 63 aa7.31□□□□□ -1.24
PSMD6-201ENST00000295901 SPRR2DP22532 72 aa7.29□□□□□ -1.24
PSMD6-201ENST00000295901 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
PSMD6-201ENST00000295901 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
PSMD6-201ENST00000295901 MT1EP04732 61 aa7.21□□□□□ -1.25
PSMD6-201ENST00000295901 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
PSMD6-201ENST00000295901 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
PSMD6-201ENST00000295901 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
PSMD6-201ENST00000295901 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
PSMD6-201ENST00000295901 MT1LQ93083 61 aa7□□□□□ -1.29
PSMD6-201ENST00000295901 PRAC1Q96KF2 57 aa7□□□□□ -1.29
PSMD6-201ENST00000295901 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
PSMD6-201ENST00000295901 GPR98Q8WXG9 6306 aa6.94□□□□□ -1.3
PSMD6-201ENST00000295901 MT1GP13640 62 aa6.93□□□□□ -1.3
PSMD6-201ENST00000295901 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
PSMD6-201ENST00000295901 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
PSMD6-201ENST00000295901 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.32
PSMD6-201ENST00000295901 MT1MQ8N339 61 aa6.81□□□□□ -1.32
PSMD6-201ENST00000295901 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
PSMD6-201ENST00000295901 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
PSMD6-201ENST00000295901 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
PSMD6-201ENST00000295901 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
PSMD6-201ENST00000295901 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
PSMD6-201ENST00000295901 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
PSMD6-201ENST00000295901 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
PSMD6-201ENST00000295901 AHNAK2Q8IVF2 5795 aa6.44□□□□□ -1.38
PSMD6-201ENST00000295901 MT4P47944 62 aa6.43□□□□□ -1.38
PSMD6-201ENST00000295901 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
PSMD6-201ENST00000295901 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
PSMD6-201ENST00000295901 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
PSMD6-201ENST00000295901 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
PSMD6-201ENST00000295901 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
PSMD6-201ENST00000295901 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
PSMD6-201ENST00000295901 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
PSMD6-201ENST00000295901 KRTAP5-4Q6L8H1 288 aa6.2□□□□□ -1.42
PSMD6-201ENST00000295901 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
PSMD6-201ENST00000295901 KRTAP5-7Q6L8G8 165 aa6□□□□□ -1.45
PSMD6-201ENST00000295901 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
PSMD6-201ENST00000295901 MT1AP04731 61 aa5.97□□□□□ -1.45
PSMD6-201ENST00000295901 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.47
PSMD6-201ENST00000295901 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
PSMD6-201ENST00000295901 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
PSMD6-201ENST00000295901 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
PSMD6-201ENST00000295901 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
PSMD6-201ENST00000295901 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
PSMD6-201ENST00000295901 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
PSMD6-201ENST00000295901 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
PSMD6-201ENST00000295901 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
PSMD6-201ENST00000295901 MT3P25713 68 aa5.44□□□□□ -1.54
PSMD6-201ENST00000295901 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
PSMD6-201ENST00000295901 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
PSMD6-201ENST00000295901 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
PSMD6-201ENST00000295901 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
PSMD6-201ENST00000295901 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
PSMD6-201ENST00000295901 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
PSMD6-201ENST00000295901 H3BS24 57 aa5.16□□□□□ -1.58
PSMD6-201ENST00000295901 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
PSMD6-201ENST00000295901 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
PSMD6-201ENST00000295901 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
PSMD6-201ENST00000295901 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
PSMD6-201ENST00000295901 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
PSMD6-201ENST00000295901 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
PSMD6-201ENST00000295901 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
PSMD6-201ENST00000295901 INE1O15225 51 aa4.42□□□□□ -1.7
PSMD6-201ENST00000295901 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
PSMD6-201ENST00000295901 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
PSMD6-201ENST00000295901 PRM1P04553 51 aa3.94□□□□□ -1.78
PSMD6-201ENST00000295901 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
PSMD6-201ENST00000295901 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
PSMD6-201ENST00000295901 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PSMD6-201ENST00000295901 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
PSMD6-201ENST00000295901 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
PSMD6-201ENST00000295901 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
PSMD6-201ENST00000295901 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 146.5 ms