RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 ROMO1P60602 79 aa7.07□□□□□ -1.28
KRTCAP3-201ENST00000288873 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
KRTCAP3-201ENST00000288873 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
KRTCAP3-201ENST00000288873 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
KRTCAP3-201ENST00000288873 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
KRTCAP3-201ENST00000288873 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
KRTCAP3-201ENST00000288873 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
KRTCAP3-201ENST00000288873 MT1LQ93083 61 aa6.88□□□□□ -1.31
KRTCAP3-201ENST00000288873 MT1GP13640 62 aa6.86□□□□□ -1.31
KRTCAP3-201ENST00000288873 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
KRTCAP3-201ENST00000288873 MT1MQ8N339 61 aa6.75□□□□□ -1.33
KRTCAP3-201ENST00000288873 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
KRTCAP3-201ENST00000288873 PMAIP1Q13794 54 aa6.61□□□□□ -1.35
KRTCAP3-201ENST00000288873 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
KRTCAP3-201ENST00000288873 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
KRTCAP3-201ENST00000288873 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
KRTCAP3-201ENST00000288873 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
KRTCAP3-201ENST00000288873 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
KRTCAP3-201ENST00000288873 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
KRTCAP3-201ENST00000288873 PRO0628Q9UI54 55 aa6.48□□□□□ -1.37
KRTCAP3-201ENST00000288873 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
KRTCAP3-201ENST00000288873 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
KRTCAP3-201ENST00000288873 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
KRTCAP3-201ENST00000288873 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
KRTCAP3-201ENST00000288873 MT4P47944 62 aa6.24□□□□□ -1.41
KRTCAP3-201ENST00000288873 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
KRTCAP3-201ENST00000288873 HMCN1Q96RW7 5635 aa6.2□□□□□ -1.42
KRTCAP3-201ENST00000288873 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
KRTCAP3-201ENST00000288873 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
KRTCAP3-201ENST00000288873 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
KRTCAP3-201ENST00000288873 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
KRTCAP3-201ENST00000288873 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
KRTCAP3-201ENST00000288873 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
KRTCAP3-201ENST00000288873 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
KRTCAP3-201ENST00000288873 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
KRTCAP3-201ENST00000288873 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
KRTCAP3-201ENST00000288873 MT1AP04731 61 aa5.86□□□□□ -1.47
KRTCAP3-201ENST00000288873 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
KRTCAP3-201ENST00000288873 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
KRTCAP3-201ENST00000288873 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
KRTCAP3-201ENST00000288873 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
KRTCAP3-201ENST00000288873 KRTAP20-2Q3LI61 65 aa5.8□□□□□ -1.48
KRTCAP3-201ENST00000288873 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
KRTCAP3-201ENST00000288873 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
KRTCAP3-201ENST00000288873 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
KRTCAP3-201ENST00000288873 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
KRTCAP3-201ENST00000288873 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
KRTCAP3-201ENST00000288873 MT3P25713 68 aa5.34□□□□□ -1.55
KRTCAP3-201ENST00000288873 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
KRTCAP3-201ENST00000288873 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
KRTCAP3-201ENST00000288873 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
KRTCAP3-201ENST00000288873 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
KRTCAP3-201ENST00000288873 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
KRTCAP3-201ENST00000288873 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
KRTCAP3-201ENST00000288873 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
KRTCAP3-201ENST00000288873 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
KRTCAP3-201ENST00000288873 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
KRTCAP3-201ENST00000288873 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
KRTCAP3-201ENST00000288873 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
KRTCAP3-201ENST00000288873 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
KRTCAP3-201ENST00000288873 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
KRTCAP3-201ENST00000288873 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
KRTCAP3-201ENST00000288873 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
KRTCAP3-201ENST00000288873 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
KRTCAP3-201ENST00000288873 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
KRTCAP3-201ENST00000288873 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
KRTCAP3-201ENST00000288873 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
KRTCAP3-201ENST00000288873 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
KRTCAP3-201ENST00000288873 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
KRTCAP3-201ENST00000288873 INE1O15225 51 aa3.77□□□□□ -1.81
KRTCAP3-201ENST00000288873 PRM1P04553 51 aa3.64□□□□□ -1.83
KRTCAP3-201ENST00000288873 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
KRTCAP3-201ENST00000288873 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
KRTCAP3-201ENST00000288873 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
KRTCAP3-201ENST00000288873 H3BS24 57 aa2.85□□□□□ -1.95
KRTCAP3-201ENST00000288873 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
KRTCAP3-201ENST00000288873 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 82.3 ms