RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 SCGB1A1P11684 91 aa3.72□□□□□ -1.81
NSMCE2-201ENST00000287437 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
NSMCE2-201ENST00000287437 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
NSMCE2-201ENST00000287437 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
NSMCE2-201ENST00000287437 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
NSMCE2-201ENST00000287437 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
NSMCE2-201ENST00000287437 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
NSMCE2-201ENST00000287437 SPATA8Q6RVD6 105 aa3.61□□□□□ -1.83
NSMCE2-201ENST00000287437 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
NSMCE2-201ENST00000287437 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
NSMCE2-201ENST00000287437 SNURFQ9Y675 71 aa3.55□□□□□ -1.84
NSMCE2-201ENST00000287437 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
NSMCE2-201ENST00000287437 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
NSMCE2-201ENST00000287437 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
NSMCE2-201ENST00000287437 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
NSMCE2-201ENST00000287437 SEC61GP60059 68 aa3.51□□□□□ -1.85
NSMCE2-201ENST00000287437 SMIM20Q8N5G0 67 aa3.51□□□□□ -1.85
NSMCE2-201ENST00000287437 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
NSMCE2-201ENST00000287437 A0A1B0GU33 70 aa3.49□□□□□ -1.85
NSMCE2-201ENST00000287437 TNP1P09430 55 aa3.49□□□□□ -1.85
NSMCE2-201ENST00000287437 J3QR89 54 aa3.48□□□□□ -1.85
NSMCE2-201ENST00000287437 COA5Q86WW8 74 aa3.47□□□□□ -1.85
NSMCE2-201ENST00000287437 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
NSMCE2-201ENST00000287437 A0A1B0GV90 55 aa3.42□□□□□ -1.86
NSMCE2-201ENST00000287437 A8MU10 97 aa3.41□□□□□ -1.86
NSMCE2-201ENST00000287437 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
NSMCE2-201ENST00000287437 SMIM26A0A096LP01 95 aa3.38□□□□□ -1.87
NSMCE2-201ENST00000287437 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NSMCE2-201ENST00000287437 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
NSMCE2-201ENST00000287437 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-201ENST00000287437 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
NSMCE2-201ENST00000287437 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
NSMCE2-201ENST00000287437 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
NSMCE2-201ENST00000287437 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
NSMCE2-201ENST00000287437 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
NSMCE2-201ENST00000287437 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
NSMCE2-201ENST00000287437 SERP2Q8N6R1 65 aa3.3□□□□□ -1.88
NSMCE2-201ENST00000287437 A0A1B0GU69 56 aa3.29□□□□□ -1.88
NSMCE2-201ENST00000287437 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
NSMCE2-201ENST00000287437 MT1AP04731 61 aa3.21□□□□□ -1.9
NSMCE2-201ENST00000287437 K7ERU9 68 aa3.19□□□□□ -1.9
NSMCE2-201ENST00000287437 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
NSMCE2-201ENST00000287437 H7BZZ5 65 aa3.14□□□□□ -1.91
NSMCE2-201ENST00000287437 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
NSMCE2-201ENST00000287437 COX7CP15954 63 aa3.09□□□□□ -1.91
NSMCE2-201ENST00000287437 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
NSMCE2-201ENST00000287437 V9GYY9 64 aa3.06□□□□□ -1.92
NSMCE2-201ENST00000287437 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
NSMCE2-201ENST00000287437 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
NSMCE2-201ENST00000287437 UQCR11O14957 56 aa2.96□□□□□ -1.94
NSMCE2-201ENST00000287437 K7ERS5 55 aa2.87□□□□□ -1.95
NSMCE2-201ENST00000287437 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
NSMCE2-201ENST00000287437 ATP5EP56381 51 aaPredicted RBP2.81□□□□□ -1.96
NSMCE2-201ENST00000287437 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
NSMCE2-201ENST00000287437 CCDC179H3BU77 68 aa2.78□□□□□ -1.96
NSMCE2-201ENST00000287437 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
NSMCE2-201ENST00000287437 PSPHP1O15172 72 aa2.72□□□□□ -1.97
NSMCE2-201ENST00000287437 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
NSMCE2-201ENST00000287437 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
NSMCE2-201ENST00000287437 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
NSMCE2-201ENST00000287437 Q1T7F1 81 aa2.65□□□□□ -1.99
NSMCE2-201ENST00000287437 ROMO1P60602 79 aa2.62□□□□□ -1.99
NSMCE2-201ENST00000287437 TMEM258P61165 79 aa2.62□□□□□ -1.99
NSMCE2-201ENST00000287437 PMAIP1Q13794 54 aa2.58□□□□□ -2
NSMCE2-201ENST00000287437 LCE1CQ5T751 118 aa2.57□□□□□ -2
NSMCE2-201ENST00000287437 LUZP6Q538Z0 58 aa2.55□□□□□ -2
NSMCE2-201ENST00000287437 A6NED7 52 aa2.53□□□□□ -2
NSMCE2-201ENST00000287437 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
NSMCE2-201ENST00000287437 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
NSMCE2-201ENST00000287437 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
NSMCE2-201ENST00000287437 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
NSMCE2-201ENST00000287437 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
NSMCE2-201ENST00000287437 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
NSMCE2-201ENST00000287437 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
NSMCE2-201ENST00000287437 INE1O15225 51 aa1.67□□□□□ -2.14
NSMCE2-201ENST00000287437 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
NSMCE2-201ENST00000287437 PRM1P04553 51 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms