RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 MT1MQ8N339 61 aa7.21□□□□□ -1.26
CFC1-201ENST00000259216 Q1T7F1 81 aa7.2□□□□□ -1.26
CFC1-201ENST00000259216 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
CFC1-201ENST00000259216 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
CFC1-201ENST00000259216 TNP1P09430 55 aa7.15□□□□□ -1.26
CFC1-201ENST00000259216 PSPHP1O15172 72 aa7.14□□□□□ -1.27
CFC1-201ENST00000259216 UQCR11O14957 56 aa7.13□□□□□ -1.27
CFC1-201ENST00000259216 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
CFC1-201ENST00000259216 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
CFC1-201ENST00000259216 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
CFC1-201ENST00000259216 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
CFC1-201ENST00000259216 A6NED7 52 aa6.95□□□□□ -1.3
CFC1-201ENST00000259216 KRTAP5-4Q6L8H1 288 aa6.94□□□□□ -1.3
CFC1-201ENST00000259216 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
CFC1-201ENST00000259216 MT4P47944 62 aa6.89□□□□□ -1.31
CFC1-201ENST00000259216 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
CFC1-201ENST00000259216 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
CFC1-201ENST00000259216 K7ERS5 55 aa6.84□□□□□ -1.31
CFC1-201ENST00000259216 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
CFC1-201ENST00000259216 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
CFC1-201ENST00000259216 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
CFC1-201ENST00000259216 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
CFC1-201ENST00000259216 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
CFC1-201ENST00000259216 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
CFC1-201ENST00000259216 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
CFC1-201ENST00000259216 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
CFC1-201ENST00000259216 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
CFC1-201ENST00000259216 KRTAP20-2Q3LI61 65 aa6.51□□□□□ -1.37
CFC1-201ENST00000259216 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
CFC1-201ENST00000259216 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
CFC1-201ENST00000259216 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.38
CFC1-201ENST00000259216 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
CFC1-201ENST00000259216 ROMO1P60602 79 aa6.42□□□□□ -1.38
CFC1-201ENST00000259216 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
CFC1-201ENST00000259216 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
CFC1-201ENST00000259216 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
CFC1-201ENST00000259216 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
CFC1-201ENST00000259216 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
CFC1-201ENST00000259216 MT1AP04731 61 aa6.14□□□□□ -1.43
CFC1-201ENST00000259216 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
CFC1-201ENST00000259216 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
CFC1-201ENST00000259216 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
CFC1-201ENST00000259216 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
CFC1-201ENST00000259216 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
CFC1-201ENST00000259216 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
CFC1-201ENST00000259216 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
CFC1-201ENST00000259216 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
CFC1-201ENST00000259216 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
CFC1-201ENST00000259216 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
CFC1-201ENST00000259216 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CFC1-201ENST00000259216 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
CFC1-201ENST00000259216 MT3P25713 68 aa5.57□□□□□ -1.52
CFC1-201ENST00000259216 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
CFC1-201ENST00000259216 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
CFC1-201ENST00000259216 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
CFC1-201ENST00000259216 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
CFC1-201ENST00000259216 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
CFC1-201ENST00000259216 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
CFC1-201ENST00000259216 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
CFC1-201ENST00000259216 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
CFC1-201ENST00000259216 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
CFC1-201ENST00000259216 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
CFC1-201ENST00000259216 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
CFC1-201ENST00000259216 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
CFC1-201ENST00000259216 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
CFC1-201ENST00000259216 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
CFC1-201ENST00000259216 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
CFC1-201ENST00000259216 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
CFC1-201ENST00000259216 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
CFC1-201ENST00000259216 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
CFC1-201ENST00000259216 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
CFC1-201ENST00000259216 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
CFC1-201ENST00000259216 INE1O15225 51 aa3.56□□□□□ -1.84
CFC1-201ENST00000259216 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
CFC1-201ENST00000259216 PRM1P04553 51 aa3.3□□□□□ -1.88
CFC1-201ENST00000259216 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
CFC1-201ENST00000259216 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 158.4 ms