RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
PMPCB-201ENST00000249269 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
PMPCB-201ENST00000249269 MT1LQ93083 61 aa5□□□□□ -1.61
PMPCB-201ENST00000249269 MT3P25713 68 aa4.99□□□□□ -1.61
PMPCB-201ENST00000249269 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
PMPCB-201ENST00000249269 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
PMPCB-201ENST00000249269 MT1EP04732 61 aa4.96□□□□□ -1.62
PMPCB-201ENST00000249269 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
PMPCB-201ENST00000249269 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
PMPCB-201ENST00000249269 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
PMPCB-201ENST00000249269 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
PMPCB-201ENST00000249269 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
PMPCB-201ENST00000249269 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
PMPCB-201ENST00000249269 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
PMPCB-201ENST00000249269 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
PMPCB-201ENST00000249269 MT1GP13640 62 aa4.69□□□□□ -1.66
PMPCB-201ENST00000249269 USH2AO75445 5202 aa4.62□□□□□ -1.67
PMPCB-201ENST00000249269 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
PMPCB-201ENST00000249269 MT1MQ8N339 61 aa4.61□□□□□ -1.67
PMPCB-201ENST00000249269 KMT2DO14686 5537 aa4.59□□□□□ -1.68
PMPCB-201ENST00000249269 MT1AP04731 61 aa4.52□□□□□ -1.69
PMPCB-201ENST00000249269 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
PMPCB-201ENST00000249269 PRM1P04553 51 aa4.48□□□□□ -1.69
PMPCB-201ENST00000249269 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
PMPCB-201ENST00000249269 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
PMPCB-201ENST00000249269 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
PMPCB-201ENST00000249269 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
PMPCB-201ENST00000249269 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
PMPCB-201ENST00000249269 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
PMPCB-201ENST00000249269 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
PMPCB-201ENST00000249269 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
PMPCB-201ENST00000249269 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
PMPCB-201ENST00000249269 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
PMPCB-201ENST00000249269 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
PMPCB-201ENST00000249269 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
PMPCB-201ENST00000249269 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
PMPCB-201ENST00000249269 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
PMPCB-201ENST00000249269 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
PMPCB-201ENST00000249269 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
PMPCB-201ENST00000249269 SPRR2AP35326 72 aa3.82□□□□□ -1.8
PMPCB-201ENST00000249269 SPRR2EP22531 72 aa3.76□□□□□ -1.81
PMPCB-201ENST00000249269 SPRR2BP35325 72 aa3.76□□□□□ -1.81
PMPCB-201ENST00000249269 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
PMPCB-201ENST00000249269 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
PMPCB-201ENST00000249269 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
PMPCB-201ENST00000249269 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
PMPCB-201ENST00000249269 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
PMPCB-201ENST00000249269 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
PMPCB-201ENST00000249269 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
PMPCB-201ENST00000249269 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
PMPCB-201ENST00000249269 SPRR2DP22532 72 aa3.61□□□□□ -1.83
PMPCB-201ENST00000249269 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
PMPCB-201ENST00000249269 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
PMPCB-201ENST00000249269 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
PMPCB-201ENST00000249269 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
PMPCB-201ENST00000249269 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
PMPCB-201ENST00000249269 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PMPCB-201ENST00000249269 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
PMPCB-201ENST00000249269 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PMPCB-201ENST00000249269 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
PMPCB-201ENST00000249269 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
PMPCB-201ENST00000249269 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
PMPCB-201ENST00000249269 MT4P47944 62 aa3.03□□□□□ -1.92
PMPCB-201ENST00000249269 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
PMPCB-201ENST00000249269 MUC5ACP98088 5654 aa3□□□□□ -1.93
PMPCB-201ENST00000249269 NEBP20929 6669 aa2.93□□□□□ -1.94
PMPCB-201ENST00000249269 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
PMPCB-201ENST00000249269 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
PMPCB-201ENST00000249269 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
PMPCB-201ENST00000249269 KRTAP5-8O75690 187 aa2.65□□□□□ -1.98
PMPCB-201ENST00000249269 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
PMPCB-201ENST00000249269 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
PMPCB-201ENST00000249269 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
PMPCB-201ENST00000249269 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
PMPCB-201ENST00000249269 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
PMPCB-201ENST00000249269 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
PMPCB-201ENST00000249269 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 63.5 ms