RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 MT1LQ93083 61 aa4.87□□□□□ -1.63
SNRPC-201ENST00000244520 UQCR11O14957 56 aa4.86□□□□□ -1.63
SNRPC-201ENST00000244520 MT1GP13640 62 aa4.86□□□□□ -1.63
SNRPC-201ENST00000244520 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
SNRPC-201ENST00000244520 MT1MQ8N339 61 aa4.84□□□□□ -1.63
SNRPC-201ENST00000244520 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SNRPC-201ENST00000244520 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
SNRPC-201ENST00000244520 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
SNRPC-201ENST00000244520 PSPHP1O15172 72 aa4.79□□□□□ -1.64
SNRPC-201ENST00000244520 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
SNRPC-201ENST00000244520 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
SNRPC-201ENST00000244520 MT4P47944 62 aa4.69□□□□□ -1.66
SNRPC-201ENST00000244520 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
SNRPC-201ENST00000244520 Q1T7F1 81 aa4.66□□□□□ -1.66
SNRPC-201ENST00000244520 K7ERS5 55 aa4.65□□□□□ -1.67
SNRPC-201ENST00000244520 V9GYY9 64 aa4.65□□□□□ -1.67
SNRPC-201ENST00000244520 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
SNRPC-201ENST00000244520 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
SNRPC-201ENST00000244520 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
SNRPC-201ENST00000244520 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
SNRPC-201ENST00000244520 A6NED7 52 aa4.59□□□□□ -1.67
SNRPC-201ENST00000244520 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
SNRPC-201ENST00000244520 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
SNRPC-201ENST00000244520 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
SNRPC-201ENST00000244520 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
SNRPC-201ENST00000244520 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SNRPC-201ENST00000244520 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SNRPC-201ENST00000244520 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
SNRPC-201ENST00000244520 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SNRPC-201ENST00000244520 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
SNRPC-201ENST00000244520 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SNRPC-201ENST00000244520 ROMO1P60602 79 aa4.38□□□□□ -1.71
SNRPC-201ENST00000244520 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
SNRPC-201ENST00000244520 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SNRPC-201ENST00000244520 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
SNRPC-201ENST00000244520 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
SNRPC-201ENST00000244520 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SNRPC-201ENST00000244520 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
SNRPC-201ENST00000244520 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SNRPC-201ENST00000244520 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
SNRPC-201ENST00000244520 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
SNRPC-201ENST00000244520 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
SNRPC-201ENST00000244520 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
SNRPC-201ENST00000244520 MT1AP04731 61 aa4.11□□□□□ -1.75
SNRPC-201ENST00000244520 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
SNRPC-201ENST00000244520 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
SNRPC-201ENST00000244520 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
SNRPC-201ENST00000244520 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
SNRPC-201ENST00000244520 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
SNRPC-201ENST00000244520 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SNRPC-201ENST00000244520 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
SNRPC-201ENST00000244520 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
SNRPC-201ENST00000244520 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
SNRPC-201ENST00000244520 MT3P25713 68 aa3.75□□□□□ -1.81
SNRPC-201ENST00000244520 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
SNRPC-201ENST00000244520 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
SNRPC-201ENST00000244520 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
SNRPC-201ENST00000244520 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
SNRPC-201ENST00000244520 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
SNRPC-201ENST00000244520 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SNRPC-201ENST00000244520 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
SNRPC-201ENST00000244520 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SNRPC-201ENST00000244520 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
SNRPC-201ENST00000244520 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SNRPC-201ENST00000244520 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
SNRPC-201ENST00000244520 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SNRPC-201ENST00000244520 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
SNRPC-201ENST00000244520 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SNRPC-201ENST00000244520 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SNRPC-201ENST00000244520 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SNRPC-201ENST00000244520 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
SNRPC-201ENST00000244520 PHGR1C9JFL3 82 aa2.53□□□□□ -2
SNRPC-201ENST00000244520 INE1O15225 51 aa2.44□□□□□ -2.02
SNRPC-201ENST00000244520 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SNRPC-201ENST00000244520 PRM1P04553 51 aa2.29□□□□□ -2.04
SNRPC-201ENST00000244520 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SNRPC-201ENST00000244520 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 143.9 ms