RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
PDZD11-201ENST00000239666 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
PDZD11-201ENST00000239666 A0A1B0GU69 56 aa4.79□□□□□ -1.64
PDZD11-201ENST00000239666 H7BZZ5 65 aa4.79□□□□□ -1.64
PDZD11-201ENST00000239666 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
PDZD11-201ENST00000239666 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
PDZD11-201ENST00000239666 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
PDZD11-201ENST00000239666 MT1EP04732 61 aa4.72□□□□□ -1.65
PDZD11-201ENST00000239666 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
PDZD11-201ENST00000239666 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
PDZD11-201ENST00000239666 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
PDZD11-201ENST00000239666 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
PDZD11-201ENST00000239666 MT1GP13640 62 aa4.68□□□□□ -1.66
PDZD11-201ENST00000239666 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
PDZD11-201ENST00000239666 TNP1P09430 55 aa4.65□□□□□ -1.67
PDZD11-201ENST00000239666 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
PDZD11-201ENST00000239666 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
PDZD11-201ENST00000239666 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
PDZD11-201ENST00000239666 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
PDZD11-201ENST00000239666 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
PDZD11-201ENST00000239666 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
PDZD11-201ENST00000239666 UQCR11O14957 56 aa4.51□□□□□ -1.69
PDZD11-201ENST00000239666 MT1MQ8N339 61 aa4.5□□□□□ -1.69
PDZD11-201ENST00000239666 MT1LQ93083 61 aa4.5□□□□□ -1.69
PDZD11-201ENST00000239666 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
PDZD11-201ENST00000239666 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
PDZD11-201ENST00000239666 TMEM258P61165 79 aa4.46□□□□□ -1.7
PDZD11-201ENST00000239666 K7ERS5 55 aa4.43□□□□□ -1.7
PDZD11-201ENST00000239666 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
PDZD11-201ENST00000239666 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
PDZD11-201ENST00000239666 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
PDZD11-201ENST00000239666 MT4P47944 62 aa4.36□□□□□ -1.71
PDZD11-201ENST00000239666 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
PDZD11-201ENST00000239666 V9GYY9 64 aa4.35□□□□□ -1.71
PDZD11-201ENST00000239666 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
PDZD11-201ENST00000239666 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
PDZD11-201ENST00000239666 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
PDZD11-201ENST00000239666 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
PDZD11-201ENST00000239666 Q1T7F1 81 aa4.2□□□□□ -1.74
PDZD11-201ENST00000239666 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
PDZD11-201ENST00000239666 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
PDZD11-201ENST00000239666 PSPHP1O15172 72 aa4.15□□□□□ -1.75
PDZD11-201ENST00000239666 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
PDZD11-201ENST00000239666 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
PDZD11-201ENST00000239666 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
PDZD11-201ENST00000239666 A6NED7 52 aa4.09□□□□□ -1.75
PDZD11-201ENST00000239666 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
PDZD11-201ENST00000239666 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
PDZD11-201ENST00000239666 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
PDZD11-201ENST00000239666 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
PDZD11-201ENST00000239666 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
PDZD11-201ENST00000239666 ROMO1P60602 79 aa3.98□□□□□ -1.77
PDZD11-201ENST00000239666 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PDZD11-201ENST00000239666 MT1AP04731 61 aa3.86□□□□□ -1.79
PDZD11-201ENST00000239666 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
PDZD11-201ENST00000239666 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
PDZD11-201ENST00000239666 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
PDZD11-201ENST00000239666 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
PDZD11-201ENST00000239666 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PDZD11-201ENST00000239666 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
PDZD11-201ENST00000239666 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
PDZD11-201ENST00000239666 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
PDZD11-201ENST00000239666 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
PDZD11-201ENST00000239666 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
PDZD11-201ENST00000239666 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
PDZD11-201ENST00000239666 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
PDZD11-201ENST00000239666 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
PDZD11-201ENST00000239666 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
PDZD11-201ENST00000239666 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
PDZD11-201ENST00000239666 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
PDZD11-201ENST00000239666 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PDZD11-201ENST00000239666 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
PDZD11-201ENST00000239666 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
PDZD11-201ENST00000239666 PRM1P04553 51 aa1.96□□□□□ -2.1
PDZD11-201ENST00000239666 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
PDZD11-201ENST00000239666 INE1O15225 51 aa1.78□□□□□ -2.12
PDZD11-201ENST00000239666 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 709 ms