RNA–Protein interactions for RNA: ENST00000229390.7

SRSF9-201, Transcript of serine and arginine rich splicing factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF9, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-201ENST00000229390 LCE3AQ5TA76 89 aa9.43□□□□□ -0.9
SRSF9-201ENST00000229390 MT1LQ93083 61 aa9.39□□□□□ -0.91
SRSF9-201ENST00000229390 MT1MQ8N339 61 aa9.38□□□□□ -0.91
SRSF9-201ENST00000229390 UQCR11O14957 56 aa9.23□□□□□ -0.93
SRSF9-201ENST00000229390 KRTAP4-3Q9BYR4 195 aa9.22□□□□□ -0.93
SRSF9-201ENST00000229390 LCE1DQ5T752 114 aa9.2□□□□□ -0.94
SRSF9-201ENST00000229390 GPR98Q8WXG9 6306 aa9.14□□□□□ -0.95
SRSF9-201ENST00000229390 MT4P47944 62 aa9.14□□□□□ -0.95
SRSF9-201ENST00000229390 LCE4AQ5TA78 99 aa9.13□□□□□ -0.95
SRSF9-201ENST00000229390 KRTAP12-3P60328 96 aa9.06□□□□□ -0.96
SRSF9-201ENST00000229390 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
SRSF9-201ENST00000229390 HMCN1Q96RW7 5635 aa9.04□□□□□ -0.96
SRSF9-201ENST00000229390 KRTAP4-7Q9BYR0 210 aa9.03□□□□□ -0.96
SRSF9-201ENST00000229390 V9GYY9 64 aa8.96□□□□□ -0.98
SRSF9-201ENST00000229390 PSPHP1O15172 72 aa8.95□□□□□ -0.98
SRSF9-201ENST00000229390 Q1T7F1 81 aa8.92□□□□□ -0.98
SRSF9-201ENST00000229390 KRTAP5-4Q6L8H1 288 aa8.92□□□□□ -0.98
SRSF9-201ENST00000229390 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
SRSF9-201ENST00000229390 K7ERS5 55 aa8.82□□□□□ -1
SRSF9-201ENST00000229390 AHNAK2Q8IVF2 5795 aa8.73□□□□□ -1.01
SRSF9-201ENST00000229390 KRTAP4-2Q9BYR5 136 aa8.68□□□□□ -1.02
SRSF9-201ENST00000229390 A6NED7 52 aa8.65□□□□□ -1.02
SRSF9-201ENST00000229390 KRTAP5-5Q701N2 237 aaPredicted RBP8.56□□□□□ -1.04
SRSF9-201ENST00000229390 KRTAP5-10Q6L8G5 202 aa8.54□□□□□ -1.04
SRSF9-201ENST00000229390 PCP4P48539 62 aa8.51□□□□□ -1.05
SRSF9-201ENST00000229390 RPS28P62857 69 aaKnown RBP8.5□□□□□ -1.05
SRSF9-201ENST00000229390 KRTAP20-2Q3LI61 65 aa8.47□□□□□ -1.05
SRSF9-201ENST00000229390 KRTAP23-1A1A580 65 aa8.45□□□□□ -1.06
SRSF9-201ENST00000229390 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
SRSF9-201ENST00000229390 KRTAP19-4Q3LI73 84 aa8.42□□□□□ -1.06
SRSF9-201ENST00000229390 KRTAP12-4P60329 112 aa8.4□□□□□ -1.06
SRSF9-201ENST00000229390 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.06
SRSF9-201ENST00000229390 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
SRSF9-201ENST00000229390 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
SRSF9-201ENST00000229390 KRTAP5-3Q6L8H2 238 aa8.34□□□□□ -1.07
SRSF9-201ENST00000229390 LCE3CQ5T5A8 94 aa8.33□□□□□ -1.08
SRSF9-201ENST00000229390 ROMO1P60602 79 aa8.27□□□□□ -1.09
SRSF9-201ENST00000229390 SYNE1Q8NF91 8797 aaKnown RBP8.25□□□□□ -1.09
SRSF9-201ENST00000229390 KRTAP5-7Q6L8G8 165 aa8.2□□□□□ -1.1
SRSF9-201ENST00000229390 MT1AP04731 61 aa7.97□□□□□ -1.13
SRSF9-201ENST00000229390 KRTAP6-1Q3LI64 71 aa7.97□□□□□ -1.13
SRSF9-201ENST00000229390 KRTAP9-6A8MVA2 160 aa7.87□□□□□ -1.15
SRSF9-201ENST00000229390 KRTAP5-2Q701N4 177 aa7.8□□□□□ -1.16
SRSF9-201ENST00000229390 KRTAP6-2Q3LI66 62 aa7.64□□□□□ -1.19
SRSF9-201ENST00000229390 BRK1Q8WUW1 75 aa7.53□□□□□ -1.2
SRSF9-201ENST00000229390 KRTAP5-8O75690 187 aa7.48□□□□□ -1.21
SRSF9-201ENST00000229390 OBSCNQ5VST9 7968 aa7.34□□□□□ -1.24
SRSF9-201ENST00000229390 MT3P25713 68 aa7.31□□□□□ -1.24
SRSF9-201ENST00000229390 MUC5BQ9HC84 5762 aaPredicted RBP7.18□□□□□ -1.26
SRSF9-201ENST00000229390 AHNAKQ09666 5890 aaKnown RBP7.16□□□□□ -1.26
SRSF9-201ENST00000229390 MUC5ACP98088 5654 aa7.15□□□□□ -1.27
SRSF9-201ENST00000229390 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
SRSF9-201ENST00000229390 KRTAP5-1Q6L8H4 278 aa7.03□□□□□ -1.28
SRSF9-201ENST00000229390 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
SRSF9-201ENST00000229390 LCE1EQ5T753 118 aa6.67□□□□□ -1.34
SRSF9-201ENST00000229390 PRO0628Q9UI54 55 aa6.57□□□□□ -1.36
SRSF9-201ENST00000229390 LCE1BQ5T7P3 118 aa6.41□□□□□ -1.38
SRSF9-201ENST00000229390 H3BS24 57 aa6.37□□□□□ -1.39
SRSF9-201ENST00000229390 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
SRSF9-201ENST00000229390 LCE1CQ5T751 118 aa6.21□□□□□ -1.42
SRSF9-201ENST00000229390 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
SRSF9-201ENST00000229390 LCE3DQ9BYE3 92 aa6□□□□□ -1.45
SRSF9-201ENST00000229390 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.95□□□□□ -1.46
SRSF9-201ENST00000229390 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
SRSF9-201ENST00000229390 KRTAP5-11Q6L8G4 156 aa5.69□□□□□ -1.5
SRSF9-201ENST00000229390 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
SRSF9-201ENST00000229390 LCE1FQ5T754 118 aa5.47□□□□□ -1.53
SRSF9-201ENST00000229390 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
SRSF9-201ENST00000229390 PHGR1C9JFL3 82 aa5.02□□□□□ -1.61
SRSF9-201ENST00000229390 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
SRSF9-201ENST00000229390 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
SRSF9-201ENST00000229390 MUC19Q7Z5P9 8384 aa4.54□□□□□ -1.68
SRSF9-201ENST00000229390 PRM1P04553 51 aa4.25□□□□□ -1.73
SRSF9-201ENST00000229390 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
SRSF9-201ENST00000229390 INE1O15225 51 aa3.69□□□□□ -1.82
SRSF9-201ENST00000229390 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
SRSF9-201ENST00000229390 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms