RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 RYR3Q15413 4870 aa5.38□□□□□ -1.55
CDK13-201ENST00000181839 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
CDK13-201ENST00000181839 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CDK13-201ENST00000181839 LRP2P98164 4655 aa5.29□□□□□ -1.56
CDK13-201ENST00000181839 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
CDK13-201ENST00000181839 HYDINQ4G0P3 5121 aa5.15□□□□□ -1.59
CDK13-201ENST00000181839 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
CDK13-201ENST00000181839 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
CDK13-201ENST00000181839 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
CDK13-201ENST00000181839 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
CDK13-201ENST00000181839 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
CDK13-201ENST00000181839 MT1AP04731 61 aa4.94□□□□□ -1.62
CDK13-201ENST00000181839 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
CDK13-201ENST00000181839 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
CDK13-201ENST00000181839 KMT2CQ8NEZ4 4911 aaKnown RBP4.9□□□□□ -1.62
CDK13-201ENST00000181839 RYR2Q92736 4967 aa4.9□□□□□ -1.63
CDK13-201ENST00000181839 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CDK13-201ENST00000181839 HERC2O95714 4834 aa4.84□□□□□ -1.63
CDK13-201ENST00000181839 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
CDK13-201ENST00000181839 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
CDK13-201ENST00000181839 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
CDK13-201ENST00000181839 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
CDK13-201ENST00000181839 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
CDK13-201ENST00000181839 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
CDK13-201ENST00000181839 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
CDK13-201ENST00000181839 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
CDK13-201ENST00000181839 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
CDK13-201ENST00000181839 HERC1Q15751 4861 aa4.62□□□□□ -1.67
CDK13-201ENST00000181839 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
CDK13-201ENST00000181839 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.68
CDK13-201ENST00000181839 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
CDK13-201ENST00000181839 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
CDK13-201ENST00000181839 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
CDK13-201ENST00000181839 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
CDK13-201ENST00000181839 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
CDK13-201ENST00000181839 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
CDK13-201ENST00000181839 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
CDK13-201ENST00000181839 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
CDK13-201ENST00000181839 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
CDK13-201ENST00000181839 MUC2Q02817 5179 aa4.23□□□□□ -1.73
CDK13-201ENST00000181839 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.73
CDK13-201ENST00000181839 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.73
CDK13-201ENST00000181839 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
CDK13-201ENST00000181839 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
CDK13-201ENST00000181839 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CDK13-201ENST00000181839 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
CDK13-201ENST00000181839 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CDK13-201ENST00000181839 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
CDK13-201ENST00000181839 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
CDK13-201ENST00000181839 NEBP20929 6669 aa3.59□□□□□ -1.84
CDK13-201ENST00000181839 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
CDK13-201ENST00000181839 USH2AO75445 5202 aa3.55□□□□□ -1.84
CDK13-201ENST00000181839 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CDK13-201ENST00000181839 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.85
CDK13-201ENST00000181839 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
CDK13-201ENST00000181839 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
CDK13-201ENST00000181839 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
CDK13-201ENST00000181839 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
CDK13-201ENST00000181839 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
CDK13-201ENST00000181839 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
CDK13-201ENST00000181839 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
CDK13-201ENST00000181839 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
CDK13-201ENST00000181839 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
CDK13-201ENST00000181839 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
CDK13-201ENST00000181839 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
CDK13-201ENST00000181839 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
CDK13-201ENST00000181839 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
CDK13-201ENST00000181839 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
CDK13-201ENST00000181839 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
CDK13-201ENST00000181839 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CDK13-201ENST00000181839 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
CDK13-201ENST00000181839 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
CDK13-201ENST00000181839 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CDK13-201ENST00000181839 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
CDK13-201ENST00000181839 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CDK13-201ENST00000181839 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
CDK13-201ENST00000181839 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms