RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Csdc2Q91YQ3 154 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ociad1Q9CRD0 247 aaKnown RBP5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ly96Q9JHF9 160 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ramp3Q9WUP1 147 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm7173A0A0G2JEB6 3132 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 P01726 129 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 P04946 108 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 CckP09240 115 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Cd5P13379 494 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm12888Q3UW77 119 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Shisal2aA2A9G7 189 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm15127B1AVZ5 449 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm15091B1AZM2 449 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ube2d1P61080 147 aaKnown RBP5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Vmn1r62Q8R2C0 300 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Olfr1243Q8VGM7 305 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 RetnQ99P87 114 aa5.93□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ebi3O35228 228 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 P0C1Z5 52 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Clpsl2Q3UW21 102 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Hspe1Q64433 102 aaKnown RBP5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gemin7Q9CWY4 129 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 GlrxQ9QUH0 107 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Pcnx1Q9QYC1 2344 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Smr3aQ61900 147 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ubald2Q8BQH4 164 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Plxdc1Q91ZV7 500 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Zfp119aQ9JIC0 545 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Trbv31A0A075B5J5 111 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ly86O88188 162 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 P01837 106 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Tmem213Q08EA8 116 aa5.92□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Wdr38Q9D994 303 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Crip2Q9DCT8 208 aaKnown RBP5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm12845A0A0N4SUM5 588 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm15128A2ADW8 449 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Luzp4B1AV09 449 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm15107B1B0X0 449 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Umad1E0CX23 159 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm15097E9QA14 449 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Tmem170bP86050 132 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Klk13Q8CGR6 276 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Frem1Q684R7 2191 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Rbmy1bQ60990 380 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Lgals4Q8K419 326 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Ankrd39Q9D2X0 183 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Fancd2osQ9D4K4 178 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Vps13cQ8BX70 3748 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 SrarpQ3ULG3 163 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Olfr311Q5NC59 308 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Defa-rs10Q64263 91 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Gm10295Q8CCF3 114 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Q9CQ90 155 aa5.91□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Rev3lQ61493 3122 aa5.9□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Smim10l1A0A087WNQ7 89 aa5.9□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Znf575Q3TXZ1 239 aa5.9□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Olfr312Q7TRZ9 308 aa5.9□□□□□ -1.46
Bdnf-209ENSMUST00000111050 Cyyr1Q8VIH7 165 aa5.9□□□□□ -1.46
Bdnf-209ENSMUST00000111050 1520401A03RikA0A0J9YVH6 598 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 A0A1L1SR50 188 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm10135F6TEE5 83 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Defb47Q30KN1 79 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Khdc1cQ4KL78 166 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Trav7d-3Q5R1I1 112 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Apoc4Q61268 124 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 SNORCQ9CXL7 121 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 CstadQ9D245 104 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Snai3Q9QY31 287 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Timm23Q9WTQ8 209 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Rnf7Q9WTZ1 113 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Dlx1Q64317 255 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm5105Q8C6Y9 112 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Tac4Q99N14 128 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Triap1Q9D8Z2 76 aa5.9□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Obp2bA2BHR0 176 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 P06334 169 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Znf239P24399 201 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Rnf182Q8C432 247 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ighv5-6A0A075B5Q0 117 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ighv1-7A0A075B5T7 117 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm28038F7BCN9 126 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm9573F7C950 1606 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ighv3-6P18531 116 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Defa26Q3L180 93 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ndufa3Q9CQ91 84 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Q5BN45 167 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Foxc1Q61572 553 aa5.89□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Zfhx4Q9JJN2 3550 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Hcfc1Q61191 2045 aaKnown RBP5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Edn2P22389 175 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Atp5g3P56384 141 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ifitm10Q8BR26 201 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm16223Q8CBM3 117 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Zc2hc1bQ9D534 172 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 EppinQ9DA01 134 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Cacna1gQ5SUF7 2381 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ighv14-2A0A075B5R7 117 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm33815A0A087WNV3 176 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gata4Q08369 441 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Defa23Q5G866 93 aa5.88□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms