RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Brd3osA0A1B0GRB6 84 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Defa4P28311 92 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Trav7-2Q5R1I3 112 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Dph3Q8K0W9 82 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Tspan13Q9D8C2 204 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Nsun4C4P6S0 806 aaKnown RBP13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 A930003A15RikQ3U552 87 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Dpm2Q9Z324 84 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm45785A0A1B0GT05 94 aa13.19□□□□□ -0.3
Usp47-201ENSMUST00000106653 Igkv4-81A0A0G2JEY5 119 aa13.19□□□□□ -0.3
Usp47-201ENSMUST00000106653 Igkv3-1A0A075B5P1 119 aa13.19□□□□□ -0.3
Usp47-201ENSMUST00000106653 Defb18Q30KP5 85 aa13.19□□□□□ -0.3
Usp47-201ENSMUST00000106653 Cysrt1Q9D1E4 142 aa13.19□□□□□ -0.3
Usp47-201ENSMUST00000106653 Ighv1-23A0A0A6YVW3 117 aa13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 Trav14n-2A0A0G2JDF5 121 aa13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm26727M0QWT1 121 aa13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 P01793 123 aa13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 Igkv8-24A0A140T8P5 121 aa13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 Isg15Q64339 161 aaKnown RBP13.18□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm29423A0A087WRM1 55 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Sfta2E9PXB6 77 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm10188Q3V432 135 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Trav14-3A0A075B607 120 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm6793B2RXM2 351 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 PolP10400 120 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Rnf183Q8QZS5 190 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Parp4E9PYK3 1969 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Jmjd1cQ69ZK6 2350 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 CtsgP28293 261 aa13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 Ndufa4Q62425 82 aaKnown RBP13.17□□□□□ -0.3
Usp47-201ENSMUST00000106653 4930447F04RikA2AFR2 126 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Defa20Q45VN2 95 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 SeboxP70368 190 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Igkv3-2A0A075B5P0 119 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 P06330 118 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Dad1P61804 113 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm26558Q8BLW8 286 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Sdk2Q6V4S5 2176 aa13.16□□□□□ -0.3
Usp47-201ENSMUST00000106653 Pxt1Q8K459 51 aa13.15□□□□□ -0.3
Usp47-201ENSMUST00000106653 Sdhaf1Q3U276 118 aa13.15□□□□□ -0.3
Usp47-201ENSMUST00000106653 Trav7d-3Q5R1I1 112 aa13.15□□□□□ -0.3
Usp47-201ENSMUST00000106653 P01739 132 aa13.15□□□□□ -0.3
Usp47-201ENSMUST00000106653 P01643 108 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 CckP09240 115 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Tdgf1P51865 171 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Ighv1-50A0A075B5W1 117 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Trav14d-1A0A075B6B1 121 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Hbb-b2P02089 147 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Atp6v0bQ91V37 205 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Rp1l1Q8CGM2 1859 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Trav14-2A0A075B694 121 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Prop1P97458 223 aa13.14□□□□□ -0.31
Usp47-201ENSMUST00000106653 Tmem263Q9DAM7 115 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 Igkv3-9A0A140T8P4 119 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 Cd24P24807 76 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 SNORCQ9CXL7 121 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 Map6d1Q14BB9 191 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 Tmem14cQ9CQN6 114 aa13.13□□□□□ -0.31
Usp47-201ENSMUST00000106653 March3Q8BRX9 218 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm10638F6QEG2 257 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 Col8a2P25318 699 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 E030018B13RikJ3QMS9 113 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 Nbl1Q61477 178 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 Spata25Q9DA57 226 aa13.12□□□□□ -0.31
Usp47-201ENSMUST00000106653 P04943 107 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Hoxb4P10284 250 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 9230109A22RikQ8BHE6 111 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Ighv1-52A0A0A6YXC3 117 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Ndufc2Q9CQ54 120 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm7257D3YX25 99 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm20499D3Z4G5 72 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 9130230L23RikQ8CC80 163 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Dmrtc1c1Q9D410 238 aa13.11□□□□□ -0.31
Usp47-201ENSMUST00000106653 Igkv4-62A0A0G2JDW9 117 aa13.1□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm15127B1AVZ5 449 aa13.1□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm9913Q8BQQ2 135 aa13.1□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm10553J3QPF1 123 aa13.1□□□□□ -0.31
Usp47-201ENSMUST00000106653 Ube2v1Q9CZY3 147 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 P01791 123 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 Sptan1P16546 2472 aaKnown RBP13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 Greb1Q3UHK3 1954 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm11733Q8BQP1 125 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm5089A1L3C8 106 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm5941Q497P9 117 aa13.09□□□□□ -0.31
Usp47-201ENSMUST00000106653 NrgnP60761 78 aa13.08□□□□□ -0.31
Usp47-201ENSMUST00000106653 Gm10767Q3TQP0 103 aa13.08□□□□□ -0.31
Usp47-201ENSMUST00000106653 Srsf2Q62093 221 aaKnown RBP13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Il22ra2Q80XF5 230 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Spag11Q8K4N2 71 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 UrahQ9CRB3 118 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Gemin7Q9CWY4 129 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Edn1P22387 202 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 MdfiP70331 251 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Mfap4Q9D1H9 257 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 CenpeQ6RT24 2474 aaKnown RBP13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 P01896 185 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 BlcapP62951 87 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 P01750 117 aa13.08□□□□□ -0.32
Usp47-201ENSMUST00000106653 Ighv1-77A0A0G2JGS9 117 aa13.07□□□□□ -0.32
Usp47-201ENSMUST00000106653 Igkv8-34A0A0G2JDU0 121 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms