RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SNURFQ9Y675 71 aa5.02□□□□□ -1.61
PHGDH-222ENST00000641587 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
PHGDH-222ENST00000641587 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
PHGDH-222ENST00000641587 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
PHGDH-222ENST00000641587 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
PHGDH-222ENST00000641587 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
PHGDH-222ENST00000641587 HRES1P13985 223 aa4.97□□□□□ -1.61
PHGDH-222ENST00000641587 KLKP1Q107X0 134 aa4.97□□□□□ -1.61
PHGDH-222ENST00000641587 RBM12B-AS1Q9P1G2 102 aa4.96□□□□□ -1.62
PHGDH-222ENST00000641587 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
PHGDH-222ENST00000641587 NDUFC1O43677 76 aa4.91□□□□□ -1.62
PHGDH-222ENST00000641587 PCP4P48539 62 aa4.91□□□□□ -1.62
PHGDH-222ENST00000641587 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
PHGDH-222ENST00000641587 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
PHGDH-222ENST00000641587 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
PHGDH-222ENST00000641587 H7BZZ5 65 aa4.88□□□□□ -1.63
PHGDH-222ENST00000641587 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
PHGDH-222ENST00000641587 A8MUN3 132 aa4.84□□□□□ -1.63
PHGDH-222ENST00000641587 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
PHGDH-222ENST00000641587 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
PHGDH-222ENST00000641587 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
PHGDH-222ENST00000641587 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
PHGDH-222ENST00000641587 ACYP2P14621 99 aa4.8□□□□□ -1.64
PHGDH-222ENST00000641587 TMEM258P61165 79 aa4.8□□□□□ -1.64
PHGDH-222ENST00000641587 ATP5EP56381 51 aaPredicted RBP4.79□□□□□ -1.64
PHGDH-222ENST00000641587 S4R3F8 94 aa4.79□□□□□ -1.64
PHGDH-222ENST00000641587 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
PHGDH-222ENST00000641587 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
PHGDH-222ENST00000641587 LCA10Q71F78 164 aa4.74□□□□□ -1.65
PHGDH-222ENST00000641587 COA5Q86WW8 74 aa4.74□□□□□ -1.65
PHGDH-222ENST00000641587 NEBP20929 6669 aa4.71□□□□□ -1.65
PHGDH-222ENST00000641587 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
PHGDH-222ENST00000641587 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
PHGDH-222ENST00000641587 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
PHGDH-222ENST00000641587 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
PHGDH-222ENST00000641587 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
PHGDH-222ENST00000641587 A6NN06 94 aa4.58□□□□□ -1.68
PHGDH-222ENST00000641587 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
PHGDH-222ENST00000641587 MT1BP07438 61 aa4.56□□□□□ -1.68
PHGDH-222ENST00000641587 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
PHGDH-222ENST00000641587 KMT2DO14686 5537 aa4.54□□□□□ -1.68
PHGDH-222ENST00000641587 SEC61GP60059 68 aa4.54□□□□□ -1.68
PHGDH-222ENST00000641587 H0YAA0 97 aa4.53□□□□□ -1.68
PHGDH-222ENST00000641587 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
PHGDH-222ENST00000641587 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
PHGDH-222ENST00000641587 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
PHGDH-222ENST00000641587 A0A1B0GU69 56 aa4.49□□□□□ -1.69
PHGDH-222ENST00000641587 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
PHGDH-222ENST00000641587 Q5VV11 94 aa4.49□□□□□ -1.69
PHGDH-222ENST00000641587 P0C880 135 aa4.47□□□□□ -1.69
PHGDH-222ENST00000641587 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
PHGDH-222ENST00000641587 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
PHGDH-222ENST00000641587 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
PHGDH-222ENST00000641587 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
PHGDH-222ENST00000641587 V9GYY9 64 aa4.46□□□□□ -1.7
PHGDH-222ENST00000641587 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
PHGDH-222ENST00000641587 Q1T7F1 81 aa4.43□□□□□ -1.7
PHGDH-222ENST00000641587 PSPHP1O15172 72 aa4.41□□□□□ -1.7
PHGDH-222ENST00000641587 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
PHGDH-222ENST00000641587 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
PHGDH-222ENST00000641587 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
PHGDH-222ENST00000641587 R4GN34 69 aa4.41□□□□□ -1.7
PHGDH-222ENST00000641587 M0QZ58 72 aa4.4□□□□□ -1.71
PHGDH-222ENST00000641587 A0A1B0GU33 70 aa4.39□□□□□ -1.71
PHGDH-222ENST00000641587 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
PHGDH-222ENST00000641587 SPRR2EP22531 72 aa4.34□□□□□ -1.71
PHGDH-222ENST00000641587 SPRR2BP35325 72 aa4.34□□□□□ -1.71
PHGDH-222ENST00000641587 SPRR2AP35326 72 aa4.34□□□□□ -1.71
PHGDH-222ENST00000641587 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
PHGDH-222ENST00000641587 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
PHGDH-222ENST00000641587 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
PHGDH-222ENST00000641587 UQCR11O14957 56 aa4.31□□□□□ -1.72
PHGDH-222ENST00000641587 A0A0D9SG42 100 aa4.29□□□□□ -1.72
PHGDH-222ENST00000641587 A6NED7 52 aa4.29□□□□□ -1.72
PHGDH-222ENST00000641587 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
PHGDH-222ENST00000641587 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
PHGDH-222ENST00000641587 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
PHGDH-222ENST00000641587 A8MU10 97 aa4.24□□□□□ -1.73
PHGDH-222ENST00000641587 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
PHGDH-222ENST00000641587 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
PHGDH-222ENST00000641587 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
PHGDH-222ENST00000641587 MT1XP80297 61 aa4.2□□□□□ -1.74
PHGDH-222ENST00000641587 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
PHGDH-222ENST00000641587 SPRR2DP22532 72 aa4.19□□□□□ -1.74
PHGDH-222ENST00000641587 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
PHGDH-222ENST00000641587 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
PHGDH-222ENST00000641587 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
PHGDH-222ENST00000641587 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
PHGDH-222ENST00000641587 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
PHGDH-222ENST00000641587 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
PHGDH-222ENST00000641587 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
PHGDH-222ENST00000641587 K7ERS5 55 aa4.13□□□□□ -1.75
PHGDH-222ENST00000641587 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
PHGDH-222ENST00000641587 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
PHGDH-222ENST00000641587 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
PHGDH-222ENST00000641587 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
PHGDH-222ENST00000641587 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
PHGDH-222ENST00000641587 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
PHGDH-222ENST00000641587 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
PHGDH-222ENST00000641587 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms