RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	SERP2	Q8N6R1	65 aa		4.12	□□□□□ -1.75
SPTAN1-238	ENST00000637903	FAM236D	A0A1B0GTK5	79 aa		4.11	□□□□□ -1.75
SPTAN1-238	ENST00000637903	FAM236C	P0DP71	79 aa		4.11	□□□□□ -1.75
SPTAN1-238	ENST00000637903	C4orf26	Q17RF5	130 aa		4.09	□□□□□ -1.75
SPTAN1-238	ENST00000637903	COX7C	P15954	63 aa		4.08	□□□□□ -1.76
SPTAN1-238	ENST00000637903	KRTAP10-10	P60014	251 aa		4.08	□□□□□ -1.76
SPTAN1-238	ENST00000637903	KLKP1	Q107X0	134 aa		4.08	□□□□□ -1.76
SPTAN1-238	ENST00000637903	ANAPC13	Q9BS18	74 aa		4.08	□□□□□ -1.76
SPTAN1-238	ENST00000637903	C20orf197	Q8N268	126 aa		4.07	□□□□□ -1.76
SPTAN1-238	ENST00000637903	SNURF	Q9Y675	71 aa		4.06	□□□□□ -1.76
SPTAN1-238	ENST00000637903	KRTAP19-6	Q3LI70	58 aa		4.04	□□□□□ -1.76
SPTAN1-238	ENST00000637903	H1FX-AS1	Q4G0G2	97 aa		4.03	□□□□□ -1.76
SPTAN1-238	ENST00000637903	SVIP	Q8NHG7	77 aa		4.03	□□□□□ -1.76
SPTAN1-238	ENST00000637903	KRTAP3-1	Q9BYR8	98 aa		4.03	□□□□□ -1.76
SPTAN1-238	ENST00000637903		A8MUN3	132 aa		3.99	□□□□□ -1.77
SPTAN1-238	ENST00000637903	CCDC179	H3BU77	68 aa		3.98	□□□□□ -1.77
SPTAN1-238	ENST00000637903	NDUFC1	O43677	76 aa		3.98	□□□□□ -1.77
SPTAN1-238	ENST00000637903	SPANXA2-OT1	Q8N9U9	137 aa		3.97	□□□□□ -1.77
SPTAN1-238	ENST00000637903	DMAC1	Q96GE9	116 aa		3.97	□□□□□ -1.77
SPTAN1-238	ENST00000637903		S4R3F8	94 aa		3.97	□□□□□ -1.77
SPTAN1-238	ENST00000637903	CYSTM1	Q9H1C7	97 aa		3.96	□□□□□ -1.78
SPTAN1-238	ENST00000637903		H7BZZ5	65 aa		3.95	□□□□□ -1.78
SPTAN1-238	ENST00000637903	KRTAP6-3	Q3LI67	103 aa		3.95	□□□□□ -1.78
SPTAN1-238	ENST00000637903	MACF1	Q9UPN3	7388 aa	Known RBP	3.95	□□□□□ -1.78
SPTAN1-238	ENST00000637903	LCA10	Q71F78	164 aa		3.94	□□□□□ -1.78
SPTAN1-238	ENST00000637903	SYNE2	Q8WXH0	6885 aa	Known RBP	3.93	□□□□□ -1.78
SPTAN1-238	ENST00000637903	ACYP2	P14621	99 aa		3.93	□□□□□ -1.78
SPTAN1-238	ENST00000637903	CSAG1	Q6PB30	78 aa		3.89	□□□□□ -1.79
SPTAN1-238	ENST00000637903	CHKB-CPT1B	H3BT56	60 aa		3.87	□□□□□ -1.79
SPTAN1-238	ENST00000637903	PCP4	P48539	62 aa		3.87	□□□□□ -1.79
SPTAN1-238	ENST00000637903	ATP5E	P56381	51 aa	Predicted RBP	3.86	□□□□□ -1.79
SPTAN1-238	ENST00000637903	TMEM258	P61165	79 aa		3.85	□□□□□ -1.79
SPTAN1-238	ENST00000637903	COA5	Q86WW8	74 aa		3.84	□□□□□ -1.79
SPTAN1-238	ENST00000637903	SPTSSB	Q8NFR3	76 aa		3.83	□□□□□ -1.8
SPTAN1-238	ENST00000637903		H0YAA0	97 aa		3.79	□□□□□ -1.8
SPTAN1-238	ENST00000637903		H3BS24	57 aa		3.76	□□□□□ -1.81
SPTAN1-238	ENST00000637903	ADM2	Q7Z4H4	148 aa		3.76	□□□□□ -1.81
SPTAN1-238	ENST00000637903		A6NN06	94 aa		3.75	□□□□□ -1.81
SPTAN1-238	ENST00000637903	MT1B	P07438	61 aa		3.74	□□□□□ -1.81
SPTAN1-238	ENST00000637903	KRTAP20-1	Q3LI63	56 aa		3.73	□□□□□ -1.81
SPTAN1-238	ENST00000637903	SERP1	Q9Y6X1	66 aa		3.73	□□□□□ -1.81
SPTAN1-238	ENST00000637903	MUC12	Q9UKN1	5478 aa		3.72	□□□□□ -1.81
SPTAN1-238	ENST00000637903	KRTAP19-8	Q3LI54	63 aa		3.72	□□□□□ -1.81
SPTAN1-238	ENST00000637903	NEB	P20929	6669 aa		3.72	□□□□□ -1.81
SPTAN1-238	ENST00000637903	KRTAP5-9	P26371	169 aa		3.71	□□□□□ -1.82
SPTAN1-238	ENST00000637903		Q5VV11	94 aa		3.71	□□□□□ -1.82
SPTAN1-238	ENST00000637903	SPRR2G	Q9BYE4	73 aa		3.71	□□□□□ -1.82
SPTAN1-238	ENST00000637903		P0C880	135 aa		3.7	□□□□□ -1.82
SPTAN1-238	ENST00000637903	KRTAP10-5	P60370	271 aa		3.7	□□□□□ -1.82
SPTAN1-238	ENST00000637903	SEC61G	P60059	68 aa		3.69	□□□□□ -1.82
SPTAN1-238	ENST00000637903	CRIPT	Q9P021	101 aa		3.69	□□□□□ -1.82
SPTAN1-238	ENST00000637903		A0A1B0GU69	56 aa		3.64	□□□□□ -1.83
SPTAN1-238	ENST00000637903	LINC01558	Q9Y6Z2	57 aa		3.64	□□□□□ -1.83
SPTAN1-238	ENST00000637903		R4GN34	69 aa		3.64	□□□□□ -1.83
SPTAN1-238	ENST00000637903		M0QZ58	72 aa		3.63	□□□□□ -1.83
SPTAN1-238	ENST00000637903	RPS28	P62857	69 aa	Known RBP	3.63	□□□□□ -1.83
SPTAN1-238	ENST00000637903	KMT2D	O14686	5537 aa		3.62	□□□□□ -1.83
SPTAN1-238	ENST00000637903	PRR15L	Q9BU68	103 aa		3.61	□□□□□ -1.83
SPTAN1-238	ENST00000637903	MDN1	Q9NU22	5596 aa		3.61	□□□□□ -1.83
SPTAN1-238	ENST00000637903	SMIM26	A0A096LP01	95 aa		3.6	□□□□□ -1.83
SPTAN1-238	ENST00000637903	KRTAP2-3	P0C7H8	128 aa		3.6	□□□□□ -1.83
SPTAN1-238	ENST00000637903	KRTAP2-4	Q9BYR9	128 aa		3.6	□□□□□ -1.83
SPTAN1-238	ENST00000637903		A0A1B0GU33	70 aa		3.59	□□□□□ -1.83
SPTAN1-238	ENST00000637903		V9GYY9	64 aa		3.59	□□□□□ -1.83
SPTAN1-238	ENST00000637903		Q1T7F1	81 aa		3.58	□□□□□ -1.84
SPTAN1-238	ENST00000637903	KRTAP13-4	Q3LI77	160 aa		3.57	□□□□□ -1.84
SPTAN1-238	ENST00000637903	LINC01554	Q52M75	96 aa		3.56	□□□□□ -1.84
SPTAN1-238	ENST00000637903	SPATA8	Q6RVD6	105 aa		3.54	□□□□□ -1.84
SPTAN1-238	ENST00000637903	PSPHP1	O15172	72 aa		3.53	□□□□□ -1.84
SPTAN1-238	ENST00000637903	SPRR2E	P22531	72 aa		3.51	□□□□□ -1.85
SPTAN1-238	ENST00000637903	SPRR2B	P35325	72 aa		3.51	□□□□□ -1.85
SPTAN1-238	ENST00000637903	SPRR2A	P35326	72 aa		3.51	□□□□□ -1.85
SPTAN1-238	ENST00000637903	SPRR2F	Q96RM1	72 aa		3.51	□□□□□ -1.85
SPTAN1-238	ENST00000637903		A0A0D9SG42	100 aa		3.5	□□□□□ -1.85
SPTAN1-238	ENST00000637903	UQCR11	O14957	56 aa		3.5	□□□□□ -1.85
SPTAN1-238	ENST00000637903	PLAC4	Q8WY50	150 aa		3.5	□□□□□ -1.85
SPTAN1-238	ENST00000637903	KRTAP2-2	Q9BYT5	123 aa		3.48	□□□□□ -1.85
SPTAN1-238	ENST00000637903	KRTAP2-1	Q9BYU5	128 aa		3.48	□□□□□ -1.85
SPTAN1-238	ENST00000637903	LCE1A	Q5T7P2	110 aa		3.47	□□□□□ -1.85
SPTAN1-238	ENST00000637903		A8MU10	97 aa		3.46	□□□□□ -1.86
SPTAN1-238	ENST00000637903	MT1X	P80297	61 aa		3.46	□□□□□ -1.86
SPTAN1-238	ENST00000637903	PRO2289	Q9P1D8	64 aa		3.46	□□□□□ -1.86
SPTAN1-238	ENST00000637903	MIR22HG	Q0VDD5	57 aa		3.44	□□□□□ -1.86
SPTAN1-238	ENST00000637903	KRTAP8-1	Q8IUC2	63 aa		3.44	□□□□□ -1.86
SPTAN1-238	ENST00000637903	KRTAP12-2	P59991	146 aa		3.43	□□□□□ -1.86
SPTAN1-238	ENST00000637903	SPINT4	Q6UDR6	99 aa		3.43	□□□□□ -1.86
SPTAN1-238	ENST00000637903		A6NED7	52 aa		3.42	□□□□□ -1.86
SPTAN1-238	ENST00000637903	KRTAP12-1	P59990	96 aa		3.42	□□□□□ -1.86
SPTAN1-238	ENST00000637903	SPRR2D	P22532	72 aa		3.39	□□□□□ -1.87
SPTAN1-238	ENST00000637903	CAMK2N1	Q7Z7J9	78 aa		3.39	□□□□□ -1.87
SPTAN1-238	ENST00000637903	KRTAP4-8	A0A0G2JLE6	195 aa		3.37	□□□□□ -1.87
SPTAN1-238	ENST00000637903	KRTAP4-8	Q9BYQ9	185 aa		3.37	□□□□□ -1.87
SPTAN1-238	ENST00000637903	CDC42SE1	Q9NRR8	79 aa		3.34	□□□□□ -1.87
SPTAN1-238	ENST00000637903		K7ERS5	55 aa		3.33	□□□□□ -1.88
SPTAN1-238	ENST00000637903	LCE3B	Q5TA77	95 aa		3.33	□□□□□ -1.88
SPTAN1-238	ENST00000637903	KRTAP10-12	P60413	245 aa		3.3	□□□□□ -1.88
SPTAN1-238	ENST00000637903	KRTAP10-7	P60409	375 aa	Predicted RBP	3.29	□□□□□ -1.88
SPTAN1-238	ENST00000637903		A0A0A0MQY5	61 aa		3.25	□□□□□ -1.89
SPTAN1-238	ENST00000637903	C10orf95	Q9H7T3	257 aa		3.25	□□□□□ -1.89
SPTAN1-238	ENST00000637903	BRK1	Q8WUW1	75 aa		3.24	□□□□□ -1.89

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms