RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
CLN6-221ENST00000637494 MT1BP07438 61 aa8.47□□□□□ -1.05
CLN6-221ENST00000637494 IMUPQ9GZP8 106 aa8.46□□□□□ -1.06
CLN6-221ENST00000637494 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
CLN6-221ENST00000637494 NDUFC1O43677 76 aa8.45□□□□□ -1.06
CLN6-221ENST00000637494 SYNE2Q8WXH0 6885 aaKnown RBP8.45□□□□□ -1.06
CLN6-221ENST00000637494 A0A087WVE0 104 aa8.44□□□□□ -1.06
CLN6-221ENST00000637494 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
CLN6-221ENST00000637494 A8MUN3 132 aa8.39□□□□□ -1.07
CLN6-221ENST00000637494 MP68P56378 58 aa8.36□□□□□ -1.07
CLN6-221ENST00000637494 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
CLN6-221ENST00000637494 H0YAA0 97 aa8.34□□□□□ -1.07
CLN6-221ENST00000637494 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
CLN6-221ENST00000637494 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
CLN6-221ENST00000637494 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
CLN6-221ENST00000637494 J3QR89 54 aa8.23□□□□□ -1.09
CLN6-221ENST00000637494 A0A1B0GV90 55 aa8.22□□□□□ -1.09
CLN6-221ENST00000637494 H3BPC8 53 aa8.21□□□□□ -1.1
CLN6-221ENST00000637494 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
CLN6-221ENST00000637494 C20orf197Q8N268 126 aa8.15□□□□□ -1.1
CLN6-221ENST00000637494 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
CLN6-221ENST00000637494 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
CLN6-221ENST00000637494 R4GN34 69 aa8.1□□□□□ -1.11
CLN6-221ENST00000637494 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
CLN6-221ENST00000637494 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
CLN6-221ENST00000637494 M0QZ58 72 aa8.01□□□□□ -1.13
CLN6-221ENST00000637494 P0C880 135 aa8□□□□□ -1.13
CLN6-221ENST00000637494 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
CLN6-221ENST00000637494 NEBP20929 6669 aa7.94□□□□□ -1.14
CLN6-221ENST00000637494 ACYP2P14621 99 aa7.94□□□□□ -1.14
CLN6-221ENST00000637494 MT1XP80297 61 aa7.94□□□□□ -1.14
CLN6-221ENST00000637494 MUC12Q9UKN1 5478 aa7.93□□□□□ -1.14
CLN6-221ENST00000637494 SMIM20Q8N5G0 67 aa7.93□□□□□ -1.14
CLN6-221ENST00000637494 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
CLN6-221ENST00000637494 SPTSSBQ8NFR3 76 aa7.92□□□□□ -1.14
CLN6-221ENST00000637494 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
CLN6-221ENST00000637494 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
CLN6-221ENST00000637494 K7ERU9 68 aa7.84□□□□□ -1.15
CLN6-221ENST00000637494 SPRR2FQ96RM1 72 aa7.84□□□□□ -1.15
CLN6-221ENST00000637494 MT-ATP8P03928 68 aa7.83□□□□□ -1.16
CLN6-221ENST00000637494 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
CLN6-221ENST00000637494 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
CLN6-221ENST00000637494 KMT2DO14686 5537 aa7.81□□□□□ -1.16
CLN6-221ENST00000637494 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
CLN6-221ENST00000637494 SPRR2EP22531 72 aa7.75□□□□□ -1.17
CLN6-221ENST00000637494 SPRR2BP35325 72 aa7.75□□□□□ -1.17
CLN6-221ENST00000637494 SPRR2AP35326 72 aa7.75□□□□□ -1.17
CLN6-221ENST00000637494 MDN1Q9NU22 5596 aa7.71□□□□□ -1.18
CLN6-221ENST00000637494 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
CLN6-221ENST00000637494 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
CLN6-221ENST00000637494 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
CLN6-221ENST00000637494 SPANXA2-OT1Q8N9U9 137 aa7.63□□□□□ -1.19
CLN6-221ENST00000637494 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
CLN6-221ENST00000637494 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
CLN6-221ENST00000637494 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
CLN6-221ENST00000637494 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
CLN6-221ENST00000637494 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
CLN6-221ENST00000637494 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
CLN6-221ENST00000637494 SPRR2DP22532 72 aa7.5□□□□□ -1.21
CLN6-221ENST00000637494 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
CLN6-221ENST00000637494 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
CLN6-221ENST00000637494 KRTAP2-1Q9BYU5 128 aa7.45□□□□□ -1.22
CLN6-221ENST00000637494 SEC61GP60059 68 aa7.43□□□□□ -1.22
CLN6-221ENST00000637494 COA5Q86WW8 74 aa7.43□□□□□ -1.22
CLN6-221ENST00000637494 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
CLN6-221ENST00000637494 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
CLN6-221ENST00000637494 COX7CP15954 63 aa7.3□□□□□ -1.24
CLN6-221ENST00000637494 A0A0D9SG42 100 aa7.28□□□□□ -1.24
CLN6-221ENST00000637494 LCE3BQ5TA77 95 aa7.28□□□□□ -1.24
CLN6-221ENST00000637494 A0A1B0GU33 70 aa7.23□□□□□ -1.25
CLN6-221ENST00000637494 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
CLN6-221ENST00000637494 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.26
CLN6-221ENST00000637494 H7BZZ5 65 aa7.18□□□□□ -1.26
CLN6-221ENST00000637494 A0A1B0GU69 56 aa7.1□□□□□ -1.27
CLN6-221ENST00000637494 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
CLN6-221ENST00000637494 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
CLN6-221ENST00000637494 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
CLN6-221ENST00000637494 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
CLN6-221ENST00000637494 MT1EP04732 61 aa7.05□□□□□ -1.28
CLN6-221ENST00000637494 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
CLN6-221ENST00000637494 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
CLN6-221ENST00000637494 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
CLN6-221ENST00000637494 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CLN6-221ENST00000637494 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
CLN6-221ENST00000637494 A8MU10 97 aa6.91□□□□□ -1.3
CLN6-221ENST00000637494 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
CLN6-221ENST00000637494 MT1GP13640 62 aa6.88□□□□□ -1.31
CLN6-221ENST00000637494 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
CLN6-221ENST00000637494 TNP1P09430 55 aa6.85□□□□□ -1.31
CLN6-221ENST00000637494 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
CLN6-221ENST00000637494 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
CLN6-221ENST00000637494 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
CLN6-221ENST00000637494 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
CLN6-221ENST00000637494 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
CLN6-221ENST00000637494 MT1LQ93083 61 aa6.73□□□□□ -1.33
CLN6-221ENST00000637494 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
CLN6-221ENST00000637494 MT1MQ8N339 61 aa6.72□□□□□ -1.33
CLN6-221ENST00000637494 UQCR11O14957 56 aa6.64□□□□□ -1.35
CLN6-221ENST00000637494 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
CLN6-221ENST00000637494 TMEM258P61165 79 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms