RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 SVIPQ8NHG7 77 aa8□□□□□ -1.13
CTSD-209ENST00000637158 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
CTSD-209ENST00000637158 KRTAP2-3P0C7H8 128 aa7.94□□□□□ -1.14
CTSD-209ENST00000637158 KRTAP2-4Q9BYR9 128 aa7.94□□□□□ -1.14
CTSD-209ENST00000637158 UBL5Q9BZL1 73 aa7.94□□□□□ -1.14
CTSD-209ENST00000637158 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
CTSD-209ENST00000637158 ETDBQ3ZM63 59 aa7.87□□□□□ -1.15
CTSD-209ENST00000637158 SPRR2FQ96RM1 72 aa7.8□□□□□ -1.16
CTSD-209ENST00000637158 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
CTSD-209ENST00000637158 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
CTSD-209ENST00000637158 J3QR89 54 aa7.77□□□□□ -1.17
CTSD-209ENST00000637158 SPRR2EP22531 72 aa7.77□□□□□ -1.17
CTSD-209ENST00000637158 SPRR2BP35325 72 aa7.77□□□□□ -1.17
CTSD-209ENST00000637158 SPRR2AP35326 72 aa7.77□□□□□ -1.17
CTSD-209ENST00000637158 H0YAA0 97 aa7.76□□□□□ -1.17
CTSD-209ENST00000637158 K7ERU9 68 aa7.76□□□□□ -1.17
CTSD-209ENST00000637158 A0A087WVE0 104 aa7.73□□□□□ -1.17
CTSD-209ENST00000637158 NDUFC1O43677 76 aa7.73□□□□□ -1.17
CTSD-209ENST00000637158 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
CTSD-209ENST00000637158 A8MUN3 132 aa7.69□□□□□ -1.18
CTSD-209ENST00000637158 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
CTSD-209ENST00000637158 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
CTSD-209ENST00000637158 KRTAP2-2Q9BYT5 123 aa7.67□□□□□ -1.18
CTSD-209ENST00000637158 KRTAP2-1Q9BYU5 128 aa7.67□□□□□ -1.18
CTSD-209ENST00000637158 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
CTSD-209ENST00000637158 ACYP1P07311 99 aa7.66□□□□□ -1.18
CTSD-209ENST00000637158 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
CTSD-209ENST00000637158 MT1XP80297 61 aa7.64□□□□□ -1.19
CTSD-209ENST00000637158 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
CTSD-209ENST00000637158 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
CTSD-209ENST00000637158 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
CTSD-209ENST00000637158 ATOX1O00244 68 aa7.55□□□□□ -1.2
CTSD-209ENST00000637158 SPRR2DP22532 72 aa7.53□□□□□ -1.2
CTSD-209ENST00000637158 UQCRQO14949 82 aa7.52□□□□□ -1.21
CTSD-209ENST00000637158 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
CTSD-209ENST00000637158 R4GN34 69 aa7.51□□□□□ -1.21
CTSD-209ENST00000637158 H0Y9P7 68 aa7.49□□□□□ -1.21
CTSD-209ENST00000637158 C20orf197Q8N268 126 aa7.47□□□□□ -1.21
CTSD-209ENST00000637158 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
CTSD-209ENST00000637158 ATP5EP2Q5VTU8 51 aa7.43□□□□□ -1.22
CTSD-209ENST00000637158 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
CTSD-209ENST00000637158 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
CTSD-209ENST00000637158 M0QZ58 72 aa7.39□□□□□ -1.23
CTSD-209ENST00000637158 PCP4P48539 62 aa7.39□□□□□ -1.23
CTSD-209ENST00000637158 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
CTSD-209ENST00000637158 P0C880 135 aa7.36□□□□□ -1.23
CTSD-209ENST00000637158 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
CTSD-209ENST00000637158 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
CTSD-209ENST00000637158 SCGB1A1P11684 91 aa7.32□□□□□ -1.24
CTSD-209ENST00000637158 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
CTSD-209ENST00000637158 MP68P56378 58 aa7.29□□□□□ -1.24
CTSD-209ENST00000637158 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
CTSD-209ENST00000637158 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
CTSD-209ENST00000637158 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
CTSD-209ENST00000637158 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
CTSD-209ENST00000637158 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
CTSD-209ENST00000637158 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.27
CTSD-209ENST00000637158 H3BPC8 53 aa7.14□□□□□ -1.27
CTSD-209ENST00000637158 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
CTSD-209ENST00000637158 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
CTSD-209ENST00000637158 ANAPC13Q9BS18 74 aa7.11□□□□□ -1.27
CTSD-209ENST00000637158 TRAV7A0A075B6U4 112 aa7.07□□□□□ -1.28
CTSD-209ENST00000637158 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
CTSD-209ENST00000637158 COX7CP15954 63 aa7.03□□□□□ -1.28
CTSD-209ENST00000637158 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
CTSD-209ENST00000637158 ACYP2P14621 99 aa6.97□□□□□ -1.29
CTSD-209ENST00000637158 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
CTSD-209ENST00000637158 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
CTSD-209ENST00000637158 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
CTSD-209ENST00000637158 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
CTSD-209ENST00000637158 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
CTSD-209ENST00000637158 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
CTSD-209ENST00000637158 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
CTSD-209ENST00000637158 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
CTSD-209ENST00000637158 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
CTSD-209ENST00000637158 MT1EP04732 61 aa6.8□□□□□ -1.32
CTSD-209ENST00000637158 H7BZZ5 65 aa6.78□□□□□ -1.32
CTSD-209ENST00000637158 TMEM258P61165 79 aa6.72□□□□□ -1.33
CTSD-209ENST00000637158 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
CTSD-209ENST00000637158 LCE1DQ5T752 114 aa6.71□□□□□ -1.34
CTSD-209ENST00000637158 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
CTSD-209ENST00000637158 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
CTSD-209ENST00000637158 MT1GP13640 62 aa6.67□□□□□ -1.34
CTSD-209ENST00000637158 ATP5EP56381 51 aaPredicted RBP6.66□□□□□ -1.34
CTSD-209ENST00000637158 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
CTSD-209ENST00000637158 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
CTSD-209ENST00000637158 A0A0D9SG42 100 aa6.61□□□□□ -1.35
CTSD-209ENST00000637158 MT4P47944 62 aa6.59□□□□□ -1.35
CTSD-209ENST00000637158 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
CTSD-209ENST00000637158 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
CTSD-209ENST00000637158 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
CTSD-209ENST00000637158 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
CTSD-209ENST00000637158 MT1MQ8N339 61 aa6.5□□□□□ -1.37
CTSD-209ENST00000637158 SEC61GP60059 68 aa6.47□□□□□ -1.37
CTSD-209ENST00000637158 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
CTSD-209ENST00000637158 COA5Q86WW8 74 aa6.45□□□□□ -1.38
CTSD-209ENST00000637158 KRTAP5-10Q6L8G5 202 aa6.43□□□□□ -1.38
CTSD-209ENST00000637158 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
CTSD-209ENST00000637158 MT1LQ93083 61 aa6.43□□□□□ -1.38
CTSD-209ENST00000637158 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms