RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 SYNE2Q8WXH0 6885 aaKnown RBP12.01□□□□□ -0.49
DUX4L28-201ENST00000623687 KLKP1Q107X0 134 aa11.98□□□□□ -0.49
DUX4L28-201ENST00000623687 J3QR89 54 aa11.97□□□□□ -0.49
DUX4L28-201ENST00000623687 KRTAP19-8Q3LI54 63 aa11.97□□□□□ -0.49
DUX4L28-201ENST00000623687 Q5VV11 94 aa11.95□□□□□ -0.5
DUX4L28-201ENST00000623687 OCR1Q9BZK8 76 aa11.87□□□□□ -0.51
DUX4L28-201ENST00000623687 MP68P56378 58 aa11.86□□□□□ -0.51
DUX4L28-201ENST00000623687 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
DUX4L28-201ENST00000623687 A6NN06 94 aa11.83□□□□□ -0.52
DUX4L28-201ENST00000623687 A8MUN3 132 aa11.83□□□□□ -0.52
DUX4L28-201ENST00000623687 NDUFC1O43677 76 aa11.81□□□□□ -0.52
DUX4L28-201ENST00000623687 KRTAP6-3Q3LI67 103 aa11.8□□□□□ -0.52
DUX4L28-201ENST00000623687 IMUPQ9GZP8 106 aa11.79□□□□□ -0.52
DUX4L28-201ENST00000623687 CRIPTQ9P021 101 aa11.79□□□□□ -0.52
DUX4L28-201ENST00000623687 H0YAA0 97 aa11.73□□□□□ -0.53
DUX4L28-201ENST00000623687 H3BPC8 53 aa11.73□□□□□ -0.53
DUX4L28-201ENST00000623687 KRTAP10-5P60370 271 aa11.72□□□□□ -0.53
DUX4L28-201ENST00000623687 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
DUX4L28-201ENST00000623687 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
DUX4L28-201ENST00000623687 K7ERU9 68 aa11.53□□□□□ -0.56
DUX4L28-201ENST00000623687 DMAC1Q96GE9 116 aa11.49□□□□□ -0.57
DUX4L28-201ENST00000623687 MT-ATP8P03928 68 aa11.45□□□□□ -0.58
DUX4L28-201ENST00000623687 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
DUX4L28-201ENST00000623687 P0C880 135 aa11.39□□□□□ -0.59
DUX4L28-201ENST00000623687 TRAV7A0A075B6U4 112 aa11.37□□□□□ -0.59
DUX4L28-201ENST00000623687 MUC12Q9UKN1 5478 aa11.32□□□□□ -0.6
DUX4L28-201ENST00000623687 NEBP20929 6669 aa11.32□□□□□ -0.6
DUX4L28-201ENST00000623687 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
DUX4L28-201ENST00000623687 R4GN34 69 aa11.3□□□□□ -0.6
DUX4L28-201ENST00000623687 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
DUX4L28-201ENST00000623687 KRTAP5-9P26371 169 aa11.28□□□□□ -0.6
DUX4L28-201ENST00000623687 MT1XP80297 61 aa11.26□□□□□ -0.61
DUX4L28-201ENST00000623687 ACYP2P14621 99 aa11.25□□□□□ -0.61
DUX4L28-201ENST00000623687 M0QZ58 72 aa11.23□□□□□ -0.61
DUX4L28-201ENST00000623687 PLAC4Q8WY50 150 aa11.23□□□□□ -0.61
DUX4L28-201ENST00000623687 PRO2289Q9P1D8 64 aa11.21□□□□□ -0.61
DUX4L28-201ENST00000623687 SPTSSBQ8NFR3 76 aa11.14□□□□□ -0.63
DUX4L28-201ENST00000623687 KMT2DO14686 5537 aa11.12□□□□□ -0.63
DUX4L28-201ENST00000623687 LINC01554Q52M75 96 aa11.07□□□□□ -0.64
DUX4L28-201ENST00000623687 SNURFQ9Y675 71 aa11.07□□□□□ -0.64
DUX4L28-201ENST00000623687 CHKB-CPT1BH3BT56 60 aa11.03□□□□□ -0.64
DUX4L28-201ENST00000623687 MDN1Q9NU22 5596 aa11.02□□□□□ -0.64
DUX4L28-201ENST00000623687 SERP2Q8N6R1 65 aa11.02□□□□□ -0.65
DUX4L28-201ENST00000623687 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
DUX4L28-201ENST00000623687 KRTAP12-2P59991 146 aa10.96□□□□□ -0.65
DUX4L28-201ENST00000623687 KRTAP20-1Q3LI63 56 aa10.93□□□□□ -0.66
DUX4L28-201ENST00000623687 SPRR2FQ96RM1 72 aa10.93□□□□□ -0.66
DUX4L28-201ENST00000623687 KRTAP8-1Q8IUC2 63 aa10.88□□□□□ -0.67
DUX4L28-201ENST00000623687 KRTAP4-8A0A0G2JLE6 195 aa10.79□□□□□ -0.68
DUX4L28-201ENST00000623687 KRTAP4-8Q9BYQ9 185 aa10.79□□□□□ -0.68
DUX4L28-201ENST00000623687 SPRR2EP22531 72 aa10.77□□□□□ -0.69
DUX4L28-201ENST00000623687 SPRR2BP35325 72 aa10.77□□□□□ -0.69
DUX4L28-201ENST00000623687 SPRR2AP35326 72 aa10.77□□□□□ -0.69
DUX4L28-201ENST00000623687 KRTAP10-7P60409 375 aaPredicted RBP10.75□□□□□ -0.69
DUX4L28-201ENST00000623687 COX7CP15954 63 aa10.7□□□□□ -0.7
DUX4L28-201ENST00000623687 KRTAP10-12P60413 245 aa10.68□□□□□ -0.7
DUX4L28-201ENST00000623687 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.7
DUX4L28-201ENST00000623687 LCE1AQ5T7P2 110 aa10.65□□□□□ -0.7
DUX4L28-201ENST00000623687 COA5Q86WW8 74 aa10.64□□□□□ -0.71
DUX4L28-201ENST00000623687 KRTAP2-3P0C7H8 128 aa10.63□□□□□ -0.71
DUX4L28-201ENST00000623687 KRTAP2-4Q9BYR9 128 aa10.63□□□□□ -0.71
DUX4L28-201ENST00000623687 H7BZZ5 65 aa10.5□□□□□ -0.73
DUX4L28-201ENST00000623687 SEC61GP60059 68 aa10.48□□□□□ -0.73
DUX4L28-201ENST00000623687 SERP1Q9Y6X1 66 aa10.46□□□□□ -0.73
DUX4L28-201ENST00000623687 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
DUX4L28-201ENST00000623687 SPRR2DP22532 72 aa10.41□□□□□ -0.74
DUX4L28-201ENST00000623687 CAMK2N1Q7Z7J9 78 aa10.38□□□□□ -0.75
DUX4L28-201ENST00000623687 ANAPC13Q9BS18 74 aa10.35□□□□□ -0.75
DUX4L28-201ENST00000623687 KRTAP2-2Q9BYT5 123 aa10.29□□□□□ -0.76
DUX4L28-201ENST00000623687 KRTAP2-1Q9BYU5 128 aa10.29□□□□□ -0.76
DUX4L28-201ENST00000623687 A0A0D9SG42 100 aa10.28□□□□□ -0.76
DUX4L28-201ENST00000623687 SPATA8Q6RVD6 105 aa10.26□□□□□ -0.77
DUX4L28-201ENST00000623687 A0A1B0GU33 70 aa10.25□□□□□ -0.77
DUX4L28-201ENST00000623687 LCE3BQ5TA77 95 aa10.14□□□□□ -0.79
DUX4L28-201ENST00000623687 A0A1B0GU69 56 aa10.13□□□□□ -0.79
DUX4L28-201ENST00000623687 SPINT4Q6UDR6 99 aa10.11□□□□□ -0.79
DUX4L28-201ENST00000623687 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
DUX4L28-201ENST00000623687 KRTAP12-1P59990 96 aa10.09□□□□□ -0.79
DUX4L28-201ENST00000623687 ATP5EP56381 51 aaPredicted RBP10.07□□□□□ -0.8
DUX4L28-201ENST00000623687 KRTAP19-7Q3SYF9 63 aa10.07□□□□□ -0.8
DUX4L28-201ENST00000623687 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
DUX4L28-201ENST00000623687 MT1EP04732 61 aa9.97□□□□□ -0.81
DUX4L28-201ENST00000623687 LCE5AQ5TCM9 118 aa9.91□□□□□ -0.82
DUX4L28-201ENST00000623687 PRR15LQ9BU68 103 aa9.9□□□□□ -0.82
DUX4L28-201ENST00000623687 A8MU10 97 aa9.89□□□□□ -0.83
DUX4L28-201ENST00000623687 KRTAP19-3Q7Z4W3 81 aa9.87□□□□□ -0.83
DUX4L28-201ENST00000623687 TMEM258P61165 79 aa9.81□□□□□ -0.84
DUX4L28-201ENST00000623687 KRTAP19-5Q3LI72 72 aa9.8□□□□□ -0.84
DUX4L28-201ENST00000623687 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
DUX4L28-201ENST00000623687 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
DUX4L28-201ENST00000623687 DSTQ03001 7570 aaKnown RBP9.65□□□□□ -0.86
DUX4L28-201ENST00000623687 MT1GP13640 62 aa9.62□□□□□ -0.87
DUX4L28-201ENST00000623687 LCE3AQ5TA76 89 aa9.58□□□□□ -0.88
DUX4L28-201ENST00000623687 TNP1P09430 55 aa9.57□□□□□ -0.88
DUX4L28-201ENST00000623687 UQCR11O14957 56 aa9.55□□□□□ -0.88
DUX4L28-201ENST00000623687 MT1LQ93083 61 aa9.53□□□□□ -0.88
DUX4L28-201ENST00000623687 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
DUX4L28-201ENST00000623687 MT1MQ8N339 61 aa9.5□□□□□ -0.89
DUX4L28-201ENST00000623687 KRTAP4-9Q9BYQ8 210 aa9.45□□□□□ -0.9
DUX4L28-201ENST00000623687 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms