RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 IMUPQ9GZP8 106 aa10.55□□□□□ -0.72
ATXN3-253ENST00000621269 HIST1H4AP62805 103 aaKnown RBP10.54□□□□□ -0.72
ATXN3-253ENST00000621269 ATP5EP2Q5VTU8 51 aa10.54□□□□□ -0.72
ATXN3-253ENST00000621269 UQCRQO14949 82 aa10.53□□□□□ -0.72
ATXN3-253ENST00000621269 ATOX1O00244 68 aa10.51□□□□□ -0.73
ATXN3-253ENST00000621269 NDUFC1O43677 76 aa10.51□□□□□ -0.73
ATXN3-253ENST00000621269 H0Y9P7 68 aa10.5□□□□□ -0.73
ATXN3-253ENST00000621269 FAM240AA0A1B0GVK7 77 aa10.48□□□□□ -0.73
ATXN3-253ENST00000621269 NEBP20929 6669 aa10.46□□□□□ -0.74
ATXN3-253ENST00000621269 H0YAA0 97 aa10.43□□□□□ -0.74
ATXN3-253ENST00000621269 A8MUN3 132 aa10.38□□□□□ -0.75
ATXN3-253ENST00000621269 MUC12Q9UKN1 5478 aa10.37□□□□□ -0.75
ATXN3-253ENST00000621269 ADM2Q7Z4H4 148 aa10.33□□□□□ -0.76
ATXN3-253ENST00000621269 KRTAP5-9P26371 169 aa10.32□□□□□ -0.76
ATXN3-253ENST00000621269 LINC00208Q96KT6 92 aa10.32□□□□□ -0.76
ATXN3-253ENST00000621269 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
ATXN3-253ENST00000621269 MP68P56378 58 aa10.25□□□□□ -0.77
ATXN3-253ENST00000621269 KRTAP20-1Q3LI63 56 aa10.22□□□□□ -0.77
ATXN3-253ENST00000621269 PRO2289Q9P1D8 64 aa10.2□□□□□ -0.78
ATXN3-253ENST00000621269 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
ATXN3-253ENST00000621269 PLAC4Q8WY50 150 aa10.15□□□□□ -0.78
ATXN3-253ENST00000621269 KMT2DO14686 5537 aa10.15□□□□□ -0.78
ATXN3-253ENST00000621269 R4GN34 69 aa10.11□□□□□ -0.79
ATXN3-253ENST00000621269 C20orf197Q8N268 126 aa10.09□□□□□ -0.79
ATXN3-253ENST00000621269 MDN1Q9NU22 5596 aa10.09□□□□□ -0.79
ATXN3-253ENST00000621269 MT1XP80297 61 aa10.08□□□□□ -0.8
ATXN3-253ENST00000621269 H3BPC8 53 aa10.05□□□□□ -0.8
ATXN3-253ENST00000621269 P0C880 135 aa10.03□□□□□ -0.8
ATXN3-253ENST00000621269 M0QZ58 72 aa10.01□□□□□ -0.81
ATXN3-253ENST00000621269 SPRR2FQ96RM1 72 aa10.01□□□□□ -0.81
ATXN3-253ENST00000621269 DMAC1Q96GE9 116 aa10□□□□□ -0.81
ATXN3-253ENST00000621269 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
ATXN3-253ENST00000621269 A0A1B0GV90 55 aa9.96□□□□□ -0.82
ATXN3-253ENST00000621269 KRTAP8-1Q8IUC2 63 aa9.93□□□□□ -0.82
ATXN3-253ENST00000621269 J3QR89 54 aa9.92□□□□□ -0.82
ATXN3-253ENST00000621269 KRTAP2-3P0C7H8 128 aa9.91□□□□□ -0.82
ATXN3-253ENST00000621269 SPRR2EP22531 72 aa9.91□□□□□ -0.82
ATXN3-253ENST00000621269 SPRR2BP35325 72 aa9.91□□□□□ -0.82
ATXN3-253ENST00000621269 SPRR2AP35326 72 aa9.91□□□□□ -0.82
ATXN3-253ENST00000621269 KRTAP2-4Q9BYR9 128 aa9.91□□□□□ -0.82
ATXN3-253ENST00000621269 LINC01554Q52M75 96 aa9.89□□□□□ -0.83
ATXN3-253ENST00000621269 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
ATXN3-253ENST00000621269 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
ATXN3-253ENST00000621269 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
ATXN3-253ENST00000621269 ACYP2P14621 99 aa9.76□□□□□ -0.85
ATXN3-253ENST00000621269 LCE1AQ5T7P2 110 aa9.72□□□□□ -0.85
ATXN3-253ENST00000621269 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
ATXN3-253ENST00000621269 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
ATXN3-253ENST00000621269 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
ATXN3-253ENST00000621269 MT-ATP8P03928 68 aa9.67□□□□□ -0.86
ATXN3-253ENST00000621269 KRTAP10-7P60409 375 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-253ENST00000621269 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
ATXN3-253ENST00000621269 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
ATXN3-253ENST00000621269 SPRR2DP22532 72 aa9.59□□□□□ -0.87
ATXN3-253ENST00000621269 KRTAP10-12P60413 245 aa9.58□□□□□ -0.88
ATXN3-253ENST00000621269 KRTAP2-2Q9BYT5 123 aa9.58□□□□□ -0.88
ATXN3-253ENST00000621269 KRTAP2-1Q9BYU5 128 aa9.58□□□□□ -0.88
ATXN3-253ENST00000621269 SNURFQ9Y675 71 aa9.43□□□□□ -0.9
ATXN3-253ENST00000621269 K7ERU9 68 aa9.42□□□□□ -0.9
ATXN3-253ENST00000621269 LCE3BQ5TA77 95 aa9.34□□□□□ -0.91
ATXN3-253ENST00000621269 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
ATXN3-253ENST00000621269 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
ATXN3-253ENST00000621269 KRTAP13-4Q3LI77 160 aa9.27□□□□□ -0.93
ATXN3-253ENST00000621269 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
ATXN3-253ENST00000621269 COA5Q86WW8 74 aa9.1□□□□□ -0.95
ATXN3-253ENST00000621269 SEC61GP60059 68 aa9.09□□□□□ -0.95
ATXN3-253ENST00000621269 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
ATXN3-253ENST00000621269 A0A0D9SG42 100 aa9.03□□□□□ -0.96
ATXN3-253ENST00000621269 KRTAP19-7Q3SYF9 63 aa9□□□□□ -0.97
ATXN3-253ENST00000621269 LCE5AQ5TCM9 118 aa8.96□□□□□ -0.98
ATXN3-253ENST00000621269 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
ATXN3-253ENST00000621269 MT1EP04732 61 aa8.94□□□□□ -0.98
ATXN3-253ENST00000621269 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
ATXN3-253ENST00000621269 KRTAP19-3Q7Z4W3 81 aa8.92□□□□□ -0.98
ATXN3-253ENST00000621269 A0A1B0GU33 70 aa8.91□□□□□ -0.98
ATXN3-253ENST00000621269 COX7CP15954 63 aa8.84□□□□□ -0.99
ATXN3-253ENST00000621269 KRTAP12-1P59990 96 aa8.8□□□□□ -1
ATXN3-253ENST00000621269 DSTQ03001 7570 aaKnown RBP8.79□□□□□ -1
ATXN3-253ENST00000621269 KRTAP19-5Q3LI72 72 aa8.75□□□□□ -1.01
ATXN3-253ENST00000621269 H7BZZ5 65 aa8.74□□□□□ -1.01
ATXN3-253ENST00000621269 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
ATXN3-253ENST00000621269 KRTAP4-9Q9BYQ8 210 aa8.73□□□□□ -1.01
ATXN3-253ENST00000621269 MT1GP13640 62 aa8.71□□□□□ -1.02
ATXN3-253ENST00000621269 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
ATXN3-253ENST00000621269 A0A1B0GU69 56 aa8.67□□□□□ -1.02
ATXN3-253ENST00000621269 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
ATXN3-253ENST00000621269 GPR98Q8WXG9 6306 aa8.59□□□□□ -1.03
ATXN3-253ENST00000621269 A8MU10 97 aa8.57□□□□□ -1.04
ATXN3-253ENST00000621269 MT1MQ8N339 61 aa8.53□□□□□ -1.04
ATXN3-253ENST00000621269 MT1LQ93083 61 aa8.52□□□□□ -1.05
ATXN3-253ENST00000621269 TNP1P09430 55 aa8.49□□□□□ -1.05
ATXN3-253ENST00000621269 LCE1DQ5T752 114 aa8.49□□□□□ -1.05
ATXN3-253ENST00000621269 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
ATXN3-253ENST00000621269 LCE4AQ5TA78 99 aa8.46□□□□□ -1.06
ATXN3-253ENST00000621269 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.06
ATXN3-253ENST00000621269 ANAPC13Q9BS18 74 aa8.42□□□□□ -1.06
ATXN3-253ENST00000621269 MT4P47944 62 aa8.4□□□□□ -1.06
ATXN3-253ENST00000621269 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
ATXN3-253ENST00000621269 KRTAP4-3Q9BYR4 195 aa8.33□□□□□ -1.08
ATXN3-253ENST00000621269 HMCN1Q96RW7 5635 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms