RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 LINC00846Q9NV44 126 aa3.04□□□□□ -1.92
FMR1-217ENST00000620828 MT1HP80294 61 aa3.02□□□□□ -1.93
FMR1-217ENST00000620828 ZCCHC13Q8WW36 166 aaKnown RBP3.02□□□□□ -1.93
FMR1-217ENST00000620828 PRR15Q8IV56 129 aa3.02□□□□□ -1.93
FMR1-217ENST00000620828 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
FMR1-217ENST00000620828 NREPQ16612 68 aa3.01□□□□□ -1.93
FMR1-217ENST00000620828 NDUFB1O75438 58 aa3□□□□□ -1.93
FMR1-217ENST00000620828 H0YGX0 51 aa3□□□□□ -1.93
FMR1-217ENST00000620828 LORP23490 312 aaPredicted RBP3□□□□□ -1.93
FMR1-217ENST00000620828 SPINK7P58062 85 aa2.99□□□□□ -1.93
FMR1-217ENST00000620828 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
FMR1-217ENST00000620828 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
FMR1-217ENST00000620828 A0A1W2PNM2 257 aa2.99□□□□□ -1.93
FMR1-217ENST00000620828 ROMO1P60602 79 aa2.98□□□□□ -1.93
FMR1-217ENST00000620828 A8MUU9 505 aa2.98□□□□□ -1.93
FMR1-217ENST00000620828 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
FMR1-217ENST00000620828 H7BZZ5 65 aa2.96□□□□□ -1.93
FMR1-217ENST00000620828 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.93
FMR1-217ENST00000620828 KLKP1Q107X0 134 aa2.96□□□□□ -1.94
FMR1-217ENST00000620828 PCOTHQ58A44 107 aa2.96□□□□□ -1.94
FMR1-217ENST00000620828 KRTAP10-6P60371 365 aaPredicted RBP2.94□□□□□ -1.94
FMR1-217ENST00000620828 DSCR10P59022 87 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 UQCR11O14957 56 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 WFDC13Q8IUB5 93 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 A0A1B0GW54 56 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 R4GN34 69 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 C9orf92A6NGG3 77 aa2.93□□□□□ -1.94
FMR1-217ENST00000620828 Q8N9P0 234 aaPredicted RBP2.92□□□□□ -1.94
FMR1-217ENST00000620828 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
FMR1-217ENST00000620828 Q1T7F1 81 aa2.91□□□□□ -1.94
FMR1-217ENST00000620828 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
FMR1-217ENST00000620828 H0Y9P7 68 aa2.9□□□□□ -1.94
FMR1-217ENST00000620828 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
FMR1-217ENST00000620828 HRES1P13985 223 aa2.89□□□□□ -1.95
FMR1-217ENST00000620828 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
FMR1-217ENST00000620828 A0A087WSZ3 146 aa2.88□□□□□ -1.95
FMR1-217ENST00000620828 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
FMR1-217ENST00000620828 ATP5EP2Q5VTU8 51 aa2.86□□□□□ -1.95
FMR1-217ENST00000620828 USH2AO75445 5202 aa2.86□□□□□ -1.95
FMR1-217ENST00000620828 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
FMR1-217ENST00000620828 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
FMR1-217ENST00000620828 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
FMR1-217ENST00000620828 MT2AP02795 61 aa2.82□□□□□ -1.96
FMR1-217ENST00000620828 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
FMR1-217ENST00000620828 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
FMR1-217ENST00000620828 MT1FP04733 61 aa2.8□□□□□ -1.96
FMR1-217ENST00000620828 PDE6GP18545 87 aa2.8□□□□□ -1.96
FMR1-217ENST00000620828 A0A0D9SG42 100 aa2.79□□□□□ -1.96
FMR1-217ENST00000620828 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
FMR1-217ENST00000620828 LCE2BO14633 110 aa2.79□□□□□ -1.96
FMR1-217ENST00000620828 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
FMR1-217ENST00000620828 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
FMR1-217ENST00000620828 K7EQZ3 153 aa2.74□□□□□ -1.97
FMR1-217ENST00000620828 Q5W150 140 aa2.73□□□□□ -1.97
FMR1-217ENST00000620828 A8MU10 97 aa2.73□□□□□ -1.97
FMR1-217ENST00000620828 KRTAP3-1Q9BYR8 98 aa2.72□□□□□ -1.97
FMR1-217ENST00000620828 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
FMR1-217ENST00000620828 MRPL34Q9BQ48 92 aaKnown RBP2.72□□□□□ -1.97
FMR1-217ENST00000620828 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
FMR1-217ENST00000620828 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
FMR1-217ENST00000620828 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
FMR1-217ENST00000620828 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
FMR1-217ENST00000620828 COX6B2Q6YFQ2 88 aa2.67□□□□□ -1.98
FMR1-217ENST00000620828 Q5VV11 94 aa2.67□□□□□ -1.98
FMR1-217ENST00000620828 SPATA8Q6RVD6 105 aa2.67□□□□□ -1.98
FMR1-217ENST00000620828 KRTAP19-1Q8IUB9 90 aa2.67□□□□□ -1.98
FMR1-217ENST00000620828 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.66□□□□□ -1.98
FMR1-217ENST00000620828 M0R2T5 61 aa2.64□□□□□ -1.99
FMR1-217ENST00000620828 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
FMR1-217ENST00000620828 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
FMR1-217ENST00000620828 MT1BP07438 61 aa2.61□□□□□ -1.99
FMR1-217ENST00000620828 A6NN06 94 aa2.61□□□□□ -1.99
FMR1-217ENST00000620828 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
FMR1-217ENST00000620828 KRTAP10-10P60014 251 aa2.59□□□□□ -1.99
FMR1-217ENST00000620828 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
FMR1-217ENST00000620828 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -2
FMR1-217ENST00000620828 P0C880 135 aa2.58□□□□□ -2
FMR1-217ENST00000620828 A0A1B0GU33 70 aa2.56□□□□□ -2
FMR1-217ENST00000620828 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
FMR1-217ENST00000620828 H0YAA0 97 aa2.55□□□□□ -2
FMR1-217ENST00000620828 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
FMR1-217ENST00000620828 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
FMR1-217ENST00000620828 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
FMR1-217ENST00000620828 S4R3F8 94 aa2.51□□□□□ -2.01
FMR1-217ENST00000620828 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
FMR1-217ENST00000620828 NEBP20929 6669 aa2.49□□□□□ -2.01
FMR1-217ENST00000620828 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
FMR1-217ENST00000620828 MT1XP80297 61 aa2.45□□□□□ -2.02
FMR1-217ENST00000620828 KRTAP19-4Q3LI73 84 aa2.44□□□□□ -2.02
FMR1-217ENST00000620828 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
FMR1-217ENST00000620828 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
FMR1-217ENST00000620828 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
FMR1-217ENST00000620828 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
FMR1-217ENST00000620828 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
FMR1-217ENST00000620828 KMT2DO14686 5537 aa2.38□□□□□ -2.03
FMR1-217ENST00000620828 KRTAP10-12P60413 245 aa2.36□□□□□ -2.03
FMR1-217ENST00000620828 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
FMR1-217ENST00000620828 INE1O15225 51 aa2.29□□□□□ -2.04
FMR1-217ENST00000620828 LCE1AQ5T7P2 110 aa2.28□□□□□ -2.04
FMR1-217ENST00000620828 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms