RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
CBWD3-212ENST00000616550 NDUFC1O43677 76 aa10.01□□□□□ -0.81
CBWD3-212ENST00000616550 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
CBWD3-212ENST00000616550 A8MUN3 132 aa10□□□□□ -0.81
CBWD3-212ENST00000616550 SPRR2GQ9BYE4 73 aa9.98□□□□□ -0.81
CBWD3-212ENST00000616550 SCGB1A1P11684 91 aa9.96□□□□□ -0.82
CBWD3-212ENST00000616550 IMUPQ9GZP8 106 aa9.96□□□□□ -0.82
CBWD3-212ENST00000616550 Q5VV11 94 aa9.94□□□□□ -0.82
CBWD3-212ENST00000616550 H3BPC8 53 aa9.92□□□□□ -0.82
CBWD3-212ENST00000616550 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
CBWD3-212ENST00000616550 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
CBWD3-212ENST00000616550 MT1BP07438 61 aa9.88□□□□□ -0.83
CBWD3-212ENST00000616550 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
CBWD3-212ENST00000616550 MACF1Q9UPN3 7388 aaKnown RBP9.86□□□□□ -0.83
CBWD3-212ENST00000616550 H0YAA0 97 aa9.85□□□□□ -0.83
CBWD3-212ENST00000616550 A6NN06 94 aa9.79□□□□□ -0.84
CBWD3-212ENST00000616550 K7ERU9 68 aa9.77□□□□□ -0.85
CBWD3-212ENST00000616550 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
CBWD3-212ENST00000616550 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
CBWD3-212ENST00000616550 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
CBWD3-212ENST00000616550 SMIM20Q8N5G0 67 aa9.67□□□□□ -0.86
CBWD3-212ENST00000616550 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
CBWD3-212ENST00000616550 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
CBWD3-212ENST00000616550 KRTAP6-3Q3LI67 103 aa9.63□□□□□ -0.87
CBWD3-212ENST00000616550 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
CBWD3-212ENST00000616550 ACYP2P14621 99 aa9.56□□□□□ -0.88
CBWD3-212ENST00000616550 P0C880 135 aa9.53□□□□□ -0.88
CBWD3-212ENST00000616550 R4GN34 69 aa9.53□□□□□ -0.88
CBWD3-212ENST00000616550 M0QZ58 72 aa9.45□□□□□ -0.9
CBWD3-212ENST00000616550 PLAC4Q8WY50 150 aa9.45□□□□□ -0.9
CBWD3-212ENST00000616550 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
CBWD3-212ENST00000616550 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
CBWD3-212ENST00000616550 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
CBWD3-212ENST00000616550 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
CBWD3-212ENST00000616550 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
CBWD3-212ENST00000616550 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
CBWD3-212ENST00000616550 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
CBWD3-212ENST00000616550 MT1XP80297 61 aa9.3□□□□□ -0.92
CBWD3-212ENST00000616550 SPANXA2-OT1Q8N9U9 137 aa9.3□□□□□ -0.92
CBWD3-212ENST00000616550 NEBP20929 6669 aa9.25□□□□□ -0.93
CBWD3-212ENST00000616550 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
CBWD3-212ENST00000616550 MUC12Q9UKN1 5478 aa9.2□□□□□ -0.94
CBWD3-212ENST00000616550 COX7CP15954 63 aa9.07□□□□□ -0.96
CBWD3-212ENST00000616550 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
CBWD3-212ENST00000616550 COA5Q86WW8 74 aa9.04□□□□□ -0.96
CBWD3-212ENST00000616550 KRTAP20-1Q3LI63 56 aa9□□□□□ -0.97
CBWD3-212ENST00000616550 KRTAP8-1Q8IUC2 63 aa9□□□□□ -0.97
CBWD3-212ENST00000616550 SPRR2FQ96RM1 72 aa8.99□□□□□ -0.97
CBWD3-212ENST00000616550 KMT2DO14686 5537 aa8.94□□□□□ -0.98
CBWD3-212ENST00000616550 SEC61GP60059 68 aa8.92□□□□□ -0.98
CBWD3-212ENST00000616550 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
CBWD3-212ENST00000616550 MDN1Q9NU22 5596 aa8.91□□□□□ -0.98
CBWD3-212ENST00000616550 H7BZZ5 65 aa8.9□□□□□ -0.98
CBWD3-212ENST00000616550 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
CBWD3-212ENST00000616550 KRTAP10-7P60409 375 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-212ENST00000616550 CYSTM1Q9H1C7 97 aa8.88□□□□□ -0.99
CBWD3-212ENST00000616550 KRTAP4-8A0A0G2JLE6 195 aa8.87□□□□□ -0.99
CBWD3-212ENST00000616550 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
CBWD3-212ENST00000616550 SPRR2EP22531 72 aa8.84□□□□□ -0.99
CBWD3-212ENST00000616550 SPRR2BP35325 72 aa8.84□□□□□ -0.99
CBWD3-212ENST00000616550 SPRR2AP35326 72 aa8.84□□□□□ -0.99
CBWD3-212ENST00000616550 KRTAP10-12P60413 245 aa8.84□□□□□ -0.99
CBWD3-212ENST00000616550 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
CBWD3-212ENST00000616550 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
CBWD3-212ENST00000616550 A0A0D9SG42 100 aa8.71□□□□□ -1.02
CBWD3-212ENST00000616550 A0A1B0GU33 70 aa8.71□□□□□ -1.02
CBWD3-212ENST00000616550 LCE1AQ5T7P2 110 aa8.71□□□□□ -1.02
CBWD3-212ENST00000616550 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
CBWD3-212ENST00000616550 KRTAP2-3P0C7H8 128 aa8.68□□□□□ -1.02
CBWD3-212ENST00000616550 KRTAP2-4Q9BYR9 128 aa8.68□□□□□ -1.02
CBWD3-212ENST00000616550 A0A1B0GU69 56 aa8.61□□□□□ -1.03
CBWD3-212ENST00000616550 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
CBWD3-212ENST00000616550 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
CBWD3-212ENST00000616550 SPRR2DP22532 72 aa8.55□□□□□ -1.04
CBWD3-212ENST00000616550 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-212ENST00000616550 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
CBWD3-212ENST00000616550 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
CBWD3-212ENST00000616550 KRTAP2-2Q9BYT5 123 aa8.42□□□□□ -1.06
CBWD3-212ENST00000616550 KRTAP2-1Q9BYU5 128 aa8.42□□□□□ -1.06
CBWD3-212ENST00000616550 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
CBWD3-212ENST00000616550 A8MU10 97 aa8.37□□□□□ -1.07
CBWD3-212ENST00000616550 KRTAP19-7Q3SYF9 63 aa8.3□□□□□ -1.08
CBWD3-212ENST00000616550 LCE3BQ5TA77 95 aa8.3□□□□□ -1.08
CBWD3-212ENST00000616550 TMEM258P61165 79 aa8.29□□□□□ -1.08
CBWD3-212ENST00000616550 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
CBWD3-212ENST00000616550 MT1EP04732 61 aa8.24□□□□□ -1.09
CBWD3-212ENST00000616550 LCE5AQ5TCM9 118 aa8.16□□□□□ -1.1
CBWD3-212ENST00000616550 KRTAP19-3Q7Z4W3 81 aa8.16□□□□□ -1.1
CBWD3-212ENST00000616550 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
CBWD3-212ENST00000616550 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
CBWD3-212ENST00000616550 TNP1P09430 55 aa8.12□□□□□ -1.11
CBWD3-212ENST00000616550 UQCR11O14957 56 aa8.1□□□□□ -1.11
CBWD3-212ENST00000616550 MT1GP13640 62 aa8□□□□□ -1.13
CBWD3-212ENST00000616550 LCE3AQ5TA76 89 aa8□□□□□ -1.13
CBWD3-212ENST00000616550 PP632Q6XCG6 107 aa7.95□□□□□ -1.14
CBWD3-212ENST00000616550 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
CBWD3-212ENST00000616550 MT1LQ93083 61 aa7.89□□□□□ -1.15
CBWD3-212ENST00000616550 DSTQ03001 7570 aaKnown RBP7.88□□□□□ -1.15
CBWD3-212ENST00000616550 V9GYY9 64 aa7.88□□□□□ -1.15
CBWD3-212ENST00000616550 MT1MQ8N339 61 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms