RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
TRAPPC3-209ENST00000616395 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
TRAPPC3-209ENST00000616395 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
TRAPPC3-209ENST00000616395 Q5W150 140 aa9.13□□□□□ -0.95
TRAPPC3-209ENST00000616395 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
TRAPPC3-209ENST00000616395 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
TRAPPC3-209ENST00000616395 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
TRAPPC3-209ENST00000616395 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
TRAPPC3-209ENST00000616395 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
TRAPPC3-209ENST00000616395 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
TRAPPC3-209ENST00000616395 MT2AP02795 61 aa9.01□□□□□ -0.97
TRAPPC3-209ENST00000616395 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
TRAPPC3-209ENST00000616395 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
TRAPPC3-209ENST00000616395 MT1FP04733 61 aa8.94□□□□□ -0.98
TRAPPC3-209ENST00000616395 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
TRAPPC3-209ENST00000616395 HRES1P13985 223 aa8.93□□□□□ -0.98
TRAPPC3-209ENST00000616395 SPINK7P58062 85 aa8.92□□□□□ -0.98
TRAPPC3-209ENST00000616395 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
TRAPPC3-209ENST00000616395 ACYP2P14621 99 aa8.89□□□□□ -0.99
TRAPPC3-209ENST00000616395 A8MUN3 132 aa8.86□□□□□ -0.99
TRAPPC3-209ENST00000616395 KRTAP19-6Q3LI70 58 aa8.86□□□□□ -0.99
TRAPPC3-209ENST00000616395 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
TRAPPC3-209ENST00000616395 DMAC1Q96GE9 116 aa8.82□□□□□ -1
TRAPPC3-209ENST00000616395 NEBP20929 6669 aa8.82□□□□□ -1
TRAPPC3-209ENST00000616395 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
TRAPPC3-209ENST00000616395 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
TRAPPC3-209ENST00000616395 COA5Q86WW8 74 aa8.77□□□□□ -1.01
TRAPPC3-209ENST00000616395 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
TRAPPC3-209ENST00000616395 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
TRAPPC3-209ENST00000616395 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
TRAPPC3-209ENST00000616395 V9GYY9 64 aa8.68□□□□□ -1.02
TRAPPC3-209ENST00000616395 KRTAP20-1Q3LI63 56 aa8.62□□□□□ -1.03
TRAPPC3-209ENST00000616395 MUC12Q9UKN1 5478 aa8.62□□□□□ -1.03
TRAPPC3-209ENST00000616395 MPLKIPQ8TAP9 179 aa8.57□□□□□ -1.04
TRAPPC3-209ENST00000616395 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
TRAPPC3-209ENST00000616395 Q1T7F1 81 aa8.54□□□□□ -1.04
TRAPPC3-209ENST00000616395 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
TRAPPC3-209ENST00000616395 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
TRAPPC3-209ENST00000616395 S4R3F8 94 aa8.49□□□□□ -1.05
TRAPPC3-209ENST00000616395 SEC61GP60059 68 aa8.47□□□□□ -1.05
TRAPPC3-209ENST00000616395 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
TRAPPC3-209ENST00000616395 A0A1B0GU69 56 aa8.39□□□□□ -1.07
TRAPPC3-209ENST00000616395 LCA10Q71F78 164 aa8.35□□□□□ -1.07
TRAPPC3-209ENST00000616395 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
TRAPPC3-209ENST00000616395 PSPHP1O15172 72 aa8.33□□□□□ -1.08
TRAPPC3-209ENST00000616395 MDN1Q9NU22 5596 aa8.33□□□□□ -1.08
TRAPPC3-209ENST00000616395 KMT2DO14686 5537 aa8.24□□□□□ -1.09
TRAPPC3-209ENST00000616395 Q5VV11 94 aa8.22□□□□□ -1.09
TRAPPC3-209ENST00000616395 A6NED7 52 aa8.19□□□□□ -1.1
TRAPPC3-209ENST00000616395 A6NN06 94 aa8.19□□□□□ -1.1
TRAPPC3-209ENST00000616395 KRTAP5-9P26371 169 aa8.19□□□□□ -1.1
TRAPPC3-209ENST00000616395 KRTAP2-3P0C7H8 128 aa8.18□□□□□ -1.1
TRAPPC3-209ENST00000616395 KRTAP2-4Q9BYR9 128 aa8.18□□□□□ -1.1
TRAPPC3-209ENST00000616395 UQCR11O14957 56 aa8.16□□□□□ -1.1
TRAPPC3-209ENST00000616395 H0YAA0 97 aa8.11□□□□□ -1.11
TRAPPC3-209ENST00000616395 A0A1B0GU33 70 aa8.09□□□□□ -1.11
TRAPPC3-209ENST00000616395 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
TRAPPC3-209ENST00000616395 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
TRAPPC3-209ENST00000616395 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
TRAPPC3-209ENST00000616395 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
TRAPPC3-209ENST00000616395 MT1BP07438 61 aa8□□□□□ -1.13
TRAPPC3-209ENST00000616395 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
TRAPPC3-209ENST00000616395 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
TRAPPC3-209ENST00000616395 M0QZ58 72 aa7.93□□□□□ -1.14
TRAPPC3-209ENST00000616395 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
TRAPPC3-209ENST00000616395 P0C880 135 aa7.9□□□□□ -1.14
TRAPPC3-209ENST00000616395 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
TRAPPC3-209ENST00000616395 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
TRAPPC3-209ENST00000616395 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
TRAPPC3-209ENST00000616395 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
TRAPPC3-209ENST00000616395 K7ERS5 55 aa7.86□□□□□ -1.15
TRAPPC3-209ENST00000616395 SPRR2EP22531 72 aa7.86□□□□□ -1.15
TRAPPC3-209ENST00000616395 SPRR2BP35325 72 aa7.86□□□□□ -1.15
TRAPPC3-209ENST00000616395 SPRR2AP35326 72 aa7.86□□□□□ -1.15
TRAPPC3-209ENST00000616395 R4GN34 69 aa7.86□□□□□ -1.15
TRAPPC3-209ENST00000616395 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
TRAPPC3-209ENST00000616395 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
TRAPPC3-209ENST00000616395 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
TRAPPC3-209ENST00000616395 GPR98Q8WXG9 6306 aa7.78□□□□□ -1.16
TRAPPC3-209ENST00000616395 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
TRAPPC3-209ENST00000616395 A0A0D9SG42 100 aa7.71□□□□□ -1.18
TRAPPC3-209ENST00000616395 A8MU10 97 aa7.68□□□□□ -1.18
TRAPPC3-209ENST00000616395 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
TRAPPC3-209ENST00000616395 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
TRAPPC3-209ENST00000616395 LCE1AQ5T7P2 110 aa7.66□□□□□ -1.18
TRAPPC3-209ENST00000616395 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
TRAPPC3-209ENST00000616395 SPRR2DP22532 72 aa7.6□□□□□ -1.19
TRAPPC3-209ENST00000616395 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
TRAPPC3-209ENST00000616395 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
TRAPPC3-209ENST00000616395 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
TRAPPC3-209ENST00000616395 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
TRAPPC3-209ENST00000616395 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
TRAPPC3-209ENST00000616395 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
TRAPPC3-209ENST00000616395 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
TRAPPC3-209ENST00000616395 ROMO1P60602 79 aa7.35□□□□□ -1.23
TRAPPC3-209ENST00000616395 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
TRAPPC3-209ENST00000616395 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
TRAPPC3-209ENST00000616395 MT1XP80297 61 aa7.3□□□□□ -1.24
TRAPPC3-209ENST00000616395 DSTQ03001 7570 aaKnown RBP7.3□□□□□ -1.24
TRAPPC3-209ENST00000616395 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms