RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
FAM228B-208ENST00000613899 A6NN06 94 aa10.18□□□□□ -0.78
FAM228B-208ENST00000613899 HIST1H4AP62805 103 aaKnown RBP10.13□□□□□ -0.79
FAM228B-208ENST00000613899 UQCRQO14949 82 aa10.11□□□□□ -0.79
FAM228B-208ENST00000613899 A0A087WVE0 104 aa10.1□□□□□ -0.79
FAM228B-208ENST00000613899 ATOX1O00244 68 aa10.1□□□□□ -0.79
FAM228B-208ENST00000613899 H0Y9P7 68 aa10.08□□□□□ -0.8
FAM228B-208ENST00000613899 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
FAM228B-208ENST00000613899 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
FAM228B-208ENST00000613899 KRTAP10-5P60370 271 aa10.02□□□□□ -0.81
FAM228B-208ENST00000613899 NDUFC1O43677 76 aa10.01□□□□□ -0.81
FAM228B-208ENST00000613899 H0YAA0 97 aa9.97□□□□□ -0.81
FAM228B-208ENST00000613899 A8MUN3 132 aa9.96□□□□□ -0.82
FAM228B-208ENST00000613899 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
FAM228B-208ENST00000613899 LINC00208Q96KT6 92 aa9.89□□□□□ -0.83
FAM228B-208ENST00000613899 MP68P56378 58 aa9.86□□□□□ -0.83
FAM228B-208ENST00000613899 ADM2Q7Z4H4 148 aa9.82□□□□□ -0.84
FAM228B-208ENST00000613899 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
FAM228B-208ENST00000613899 NEBP20929 6669 aa9.81□□□□□ -0.84
FAM228B-208ENST00000613899 MUC12Q9UKN1 5478 aa9.8□□□□□ -0.84
FAM228B-208ENST00000613899 KRTAP5-9P26371 169 aa9.73□□□□□ -0.85
FAM228B-208ENST00000613899 A0A1B0GV90 55 aa9.7□□□□□ -0.86
FAM228B-208ENST00000613899 H3BPC8 53 aa9.7□□□□□ -0.86
FAM228B-208ENST00000613899 PRO2289Q9P1D8 64 aa9.66□□□□□ -0.86
FAM228B-208ENST00000613899 J3QR89 54 aa9.65□□□□□ -0.86
FAM228B-208ENST00000613899 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
FAM228B-208ENST00000613899 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
FAM228B-208ENST00000613899 R4GN34 69 aa9.62□□□□□ -0.87
FAM228B-208ENST00000613899 KMT2DO14686 5537 aa9.6□□□□□ -0.87
FAM228B-208ENST00000613899 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
FAM228B-208ENST00000613899 PLAC4Q8WY50 150 aa9.6□□□□□ -0.87
FAM228B-208ENST00000613899 P0C880 135 aa9.56□□□□□ -0.88
FAM228B-208ENST00000613899 MT1XP80297 61 aa9.55□□□□□ -0.88
FAM228B-208ENST00000613899 MDN1Q9NU22 5596 aa9.54□□□□□ -0.88
FAM228B-208ENST00000613899 KRTAP20-1Q3LI63 56 aa9.53□□□□□ -0.88
FAM228B-208ENST00000613899 M0QZ58 72 aa9.52□□□□□ -0.89
FAM228B-208ENST00000613899 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
FAM228B-208ENST00000613899 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
FAM228B-208ENST00000613899 SPRR2FQ96RM1 72 aa9.41□□□□□ -0.9
FAM228B-208ENST00000613899 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
FAM228B-208ENST00000613899 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
FAM228B-208ENST00000613899 ACYP2P14621 99 aa9.36□□□□□ -0.91
FAM228B-208ENST00000613899 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
FAM228B-208ENST00000613899 SMIM20Q8N5G0 67 aa9.32□□□□□ -0.92
FAM228B-208ENST00000613899 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
FAM228B-208ENST00000613899 SPRR2EP22531 72 aa9.3□□□□□ -0.92
FAM228B-208ENST00000613899 SPRR2BP35325 72 aa9.3□□□□□ -0.92
FAM228B-208ENST00000613899 SPRR2AP35326 72 aa9.3□□□□□ -0.92
FAM228B-208ENST00000613899 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
FAM228B-208ENST00000613899 KRTAP2-3P0C7H8 128 aa9.25□□□□□ -0.93
FAM228B-208ENST00000613899 KRTAP2-4Q9BYR9 128 aa9.25□□□□□ -0.93
FAM228B-208ENST00000613899 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
FAM228B-208ENST00000613899 K7ERU9 68 aa9.2□□□□□ -0.94
FAM228B-208ENST00000613899 KRTAP4-8A0A0G2JLE6 195 aa9.15□□□□□ -0.94
FAM228B-208ENST00000613899 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
FAM228B-208ENST00000613899 KRTAP10-7P60409 375 aaPredicted RBP9.1□□□□□ -0.95
FAM228B-208ENST00000613899 SNURFQ9Y675 71 aa9.1□□□□□ -0.95
FAM228B-208ENST00000613899 KRTAP4-12Q9BQ66 201 aa9.09□□□□□ -0.95
FAM228B-208ENST00000613899 KRTAP10-12P60413 245 aa9.08□□□□□ -0.96
FAM228B-208ENST00000613899 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
FAM228B-208ENST00000613899 SPRR2DP22532 72 aa8.99□□□□□ -0.97
FAM228B-208ENST00000613899 LCE3BQ5TA77 95 aa8.98□□□□□ -0.97
FAM228B-208ENST00000613899 KRTAP2-2Q9BYT5 123 aa8.95□□□□□ -0.98
FAM228B-208ENST00000613899 KRTAP2-1Q9BYU5 128 aa8.95□□□□□ -0.98
FAM228B-208ENST00000613899 SERP2Q8N6R1 65 aa8.92□□□□□ -0.98
FAM228B-208ENST00000613899 KRTAP13-4Q3LI77 160 aa8.88□□□□□ -0.99
FAM228B-208ENST00000613899 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
FAM228B-208ENST00000613899 COA5Q86WW8 74 aa8.78□□□□□ -1
FAM228B-208ENST00000613899 KRTAP9-9Q9BYP9 154 aa8.78□□□□□ -1
FAM228B-208ENST00000613899 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
FAM228B-208ENST00000613899 SEC61GP60059 68 aa8.72□□□□□ -1.01
FAM228B-208ENST00000613899 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
FAM228B-208ENST00000613899 A0A0D9SG42 100 aa8.61□□□□□ -1.03
FAM228B-208ENST00000613899 COX7CP15954 63 aa8.6□□□□□ -1.03
FAM228B-208ENST00000613899 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
FAM228B-208ENST00000613899 A0A1B0GU33 70 aa8.54□□□□□ -1.04
FAM228B-208ENST00000613899 KRTAP19-7Q3SYF9 63 aa8.53□□□□□ -1.04
FAM228B-208ENST00000613899 H7BZZ5 65 aa8.51□□□□□ -1.05
FAM228B-208ENST00000613899 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
FAM228B-208ENST00000613899 MT1EP04732 61 aa8.48□□□□□ -1.05
FAM228B-208ENST00000613899 LCE5AQ5TCM9 118 aa8.47□□□□□ -1.05
FAM228B-208ENST00000613899 KRTAP19-3Q7Z4W3 81 aa8.45□□□□□ -1.06
FAM228B-208ENST00000613899 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
FAM228B-208ENST00000613899 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
FAM228B-208ENST00000613899 LCE1DQ5T752 114 aa8.43□□□□□ -1.06
FAM228B-208ENST00000613899 A0A1B0GU69 56 aa8.35□□□□□ -1.07
FAM228B-208ENST00000613899 KRTAP4-7Q9BYR0 210 aa8.34□□□□□ -1.07
FAM228B-208ENST00000613899 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
FAM228B-208ENST00000613899 KRTAP19-4Q3LI73 84 aa8.31□□□□□ -1.08
FAM228B-208ENST00000613899 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
FAM228B-208ENST00000613899 KRTAP19-5Q3LI72 72 aa8.29□□□□□ -1.08
FAM228B-208ENST00000613899 MT1GP13640 62 aa8.23□□□□□ -1.09
FAM228B-208ENST00000613899 H3BS24 57 aa8.22□□□□□ -1.09
FAM228B-208ENST00000613899 ANAPC13Q9BS18 74 aa8.22□□□□□ -1.09
FAM228B-208ENST00000613899 A8MU10 97 aa8.21□□□□□ -1.1
FAM228B-208ENST00000613899 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
FAM228B-208ENST00000613899 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
FAM228B-208ENST00000613899 KRTAP4-9Q9BYQ8 210 aa8.17□□□□□ -1.1
FAM228B-208ENST00000613899 TNP1P09430 55 aa8.1□□□□□ -1.11
FAM228B-208ENST00000613899 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms