RNA–Protein interactions for RNA: ENST00000608703.1

HSPA1A-202, Transcript of heat shock protein family A (Hsp70) member 1A, humanhuman

TSL 2 BASIC

Gene HSPA1A, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA1A-202ENST00000608703 C9orf92A6NGG3 77 aa9.72□□□□□ -0.85
HSPA1A-202ENST00000608703 XP32Q5T750 250 aa9.69□□□□□ -0.86
HSPA1A-202ENST00000608703 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
HSPA1A-202ENST00000608703 A0A1B0GU69 56 aa9.64□□□□□ -0.87
HSPA1A-202ENST00000608703 IGKV2-30P06310 120 aa9.64□□□□□ -0.87
HSPA1A-202ENST00000608703 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
HSPA1A-202ENST00000608703 LINC00313P59037 77 aa9.63□□□□□ -0.87
HSPA1A-202ENST00000608703 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
HSPA1A-202ENST00000608703 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
HSPA1A-202ENST00000608703 UQCR11O14957 56 aa9.55□□□□□ -0.88
HSPA1A-202ENST00000608703 MUC2Q02817 5179 aa9.53□□□□□ -0.88
HSPA1A-202ENST00000608703 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
HSPA1A-202ENST00000608703 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
HSPA1A-202ENST00000608703 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
HSPA1A-202ENST00000608703 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
HSPA1A-202ENST00000608703 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
HSPA1A-202ENST00000608703 KRTAP4-1Q9BYQ7 146 aa9.41□□□□□ -0.9
HSPA1A-202ENST00000608703 A8MUU9 505 aa9.4□□□□□ -0.9
HSPA1A-202ENST00000608703 PRAC1Q96KF2 57 aa9.39□□□□□ -0.91
HSPA1A-202ENST00000608703 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
HSPA1A-202ENST00000608703 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
HSPA1A-202ENST00000608703 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
HSPA1A-202ENST00000608703 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
HSPA1A-202ENST00000608703 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
HSPA1A-202ENST00000608703 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
HSPA1A-202ENST00000608703 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
HSPA1A-202ENST00000608703 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
HSPA1A-202ENST00000608703 H0YAA0 97 aa9.05□□□□□ -0.96
HSPA1A-202ENST00000608703 A0A1B0GU33 70 aa9.03□□□□□ -0.96
HSPA1A-202ENST00000608703 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
HSPA1A-202ENST00000608703 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
HSPA1A-202ENST00000608703 MT1HP80294 61 aa8.98□□□□□ -0.97
HSPA1A-202ENST00000608703 K7ERS5 55 aa8.95□□□□□ -0.98
HSPA1A-202ENST00000608703 M0R2T5 61 aa8.92□□□□□ -0.98
HSPA1A-202ENST00000608703 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
HSPA1A-202ENST00000608703 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
HSPA1A-202ENST00000608703 H3BS24 57 aa8.82□□□□□ -1
HSPA1A-202ENST00000608703 ROMO1P60602 79 aa8.78□□□□□ -1
HSPA1A-202ENST00000608703 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
HSPA1A-202ENST00000608703 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
HSPA1A-202ENST00000608703 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
HSPA1A-202ENST00000608703 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
HSPA1A-202ENST00000608703 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
HSPA1A-202ENST00000608703 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.04
HSPA1A-202ENST00000608703 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
HSPA1A-202ENST00000608703 S4R3F8 94 aa8.49□□□□□ -1.05
HSPA1A-202ENST00000608703 MT2AP02795 61 aa8.46□□□□□ -1.06
HSPA1A-202ENST00000608703 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
HSPA1A-202ENST00000608703 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
HSPA1A-202ENST00000608703 P0C880 135 aa8.42□□□□□ -1.06
HSPA1A-202ENST00000608703 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
HSPA1A-202ENST00000608703 A0A0D9SG42 100 aa8.39□□□□□ -1.07
HSPA1A-202ENST00000608703 MT1FP04733 61 aa8.39□□□□□ -1.07
HSPA1A-202ENST00000608703 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
HSPA1A-202ENST00000608703 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
HSPA1A-202ENST00000608703 KRTAP9-3Q9BYQ3 159 aa8.27□□□□□ -1.09
HSPA1A-202ENST00000608703 M0QZ58 72 aa8.26□□□□□ -1.09
HSPA1A-202ENST00000608703 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
HSPA1A-202ENST00000608703 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
HSPA1A-202ENST00000608703 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
HSPA1A-202ENST00000608703 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
HSPA1A-202ENST00000608703 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
HSPA1A-202ENST00000608703 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
HSPA1A-202ENST00000608703 LCE2BO14633 110 aa8.15□□□□□ -1.11
HSPA1A-202ENST00000608703 USH2AO75445 5202 aa8.07□□□□□ -1.12
HSPA1A-202ENST00000608703 NDUFAF8A1L188 74 aa8.05□□□□□ -1.12
HSPA1A-202ENST00000608703 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
HSPA1A-202ENST00000608703 SPRR2GQ9BYE4 73 aa7.95□□□□□ -1.14
HSPA1A-202ENST00000608703 SSPOA2VEC9 5147 aa7.93□□□□□ -1.14
HSPA1A-202ENST00000608703 R4GN34 69 aa7.86□□□□□ -1.15
HSPA1A-202ENST00000608703 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
HSPA1A-202ENST00000608703 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
HSPA1A-202ENST00000608703 MT1BP07438 61 aa7.78□□□□□ -1.16
HSPA1A-202ENST00000608703 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
HSPA1A-202ENST00000608703 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
HSPA1A-202ENST00000608703 FCGBPQ9Y6R7 5405 aaPredicted RBP7.73□□□□□ -1.17
HSPA1A-202ENST00000608703 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
HSPA1A-202ENST00000608703 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
HSPA1A-202ENST00000608703 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
HSPA1A-202ENST00000608703 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
HSPA1A-202ENST00000608703 KRTAP23-1A1A580 65 aa7.5□□□□□ -1.21
HSPA1A-202ENST00000608703 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
HSPA1A-202ENST00000608703 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.21
HSPA1A-202ENST00000608703 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
HSPA1A-202ENST00000608703 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
HSPA1A-202ENST00000608703 MT1XP80297 61 aa7.38□□□□□ -1.23
HSPA1A-202ENST00000608703 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
HSPA1A-202ENST00000608703 TNP1P09430 55 aa7.33□□□□□ -1.24
HSPA1A-202ENST00000608703 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
HSPA1A-202ENST00000608703 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
HSPA1A-202ENST00000608703 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
HSPA1A-202ENST00000608703 KMT2DO14686 5537 aa7.04□□□□□ -1.28
HSPA1A-202ENST00000608703 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
HSPA1A-202ENST00000608703 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
HSPA1A-202ENST00000608703 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
HSPA1A-202ENST00000608703 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
HSPA1A-202ENST00000608703 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
HSPA1A-202ENST00000608703 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
HSPA1A-202ENST00000608703 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
HSPA1A-202ENST00000608703 NEBP20929 6669 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms