RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 SPACA4Q8TDM5 124 aa2.97□□□□□ -1.93
LINC00240-204ENST00000607607 TNXBP22105 4242 aa2.94□□□□□ -1.94
LINC00240-204ENST00000607607 KRTAP3-3Q9BYR6 98 aa2.93□□□□□ -1.94
LINC00240-204ENST00000607607 APLNQ9ULZ1 77 aa2.93□□□□□ -1.94
LINC00240-204ENST00000607607 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
LINC00240-204ENST00000607607 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
LINC00240-204ENST00000607607 KRTAP10-8P60410 259 aa2.9□□□□□ -1.94
LINC00240-204ENST00000607607 S4R3F8 94 aa2.89□□□□□ -1.95
LINC00240-204ENST00000607607 FAT3Q8TDW7 4589 aa2.89□□□□□ -1.95
LINC00240-204ENST00000607607 RPL37P61927 97 aaKnown RBP2.89□□□□□ -1.95
LINC00240-204ENST00000607607 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
LINC00240-204ENST00000607607 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
LINC00240-204ENST00000607607 XP32Q5T750 250 aa2.86□□□□□ -1.95
LINC00240-204ENST00000607607 RYR1P21817 5038 aa2.84□□□□□ -1.95
LINC00240-204ENST00000607607 KRTAP1-4P0C5Y4 121 aa2.84□□□□□ -1.95
LINC00240-204ENST00000607607 LRP2P98164 4655 aa2.83□□□□□ -1.96
LINC00240-204ENST00000607607 SEC61BP60468 96 aaKnown RBP2.82□□□□□ -1.96
LINC00240-204ENST00000607607 UBE2DNLQ8IWF7 75 aa2.82□□□□□ -1.96
LINC00240-204ENST00000607607 K7ERS5 55 aa2.81□□□□□ -1.96
LINC00240-204ENST00000607607 KRTAP10-2P60368 255 aa2.8□□□□□ -1.96
LINC00240-204ENST00000607607 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
LINC00240-204ENST00000607607 PLAC4Q8WY50 150 aa2.8□□□□□ -1.96
LINC00240-204ENST00000607607 MUC2Q02817 5179 aa2.75□□□□□ -1.97
LINC00240-204ENST00000607607 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
LINC00240-204ENST00000607607 ABCA13Q86UQ4 5058 aa2.71□□□□□ -1.97
LINC00240-204ENST00000607607 KRTAP10-1P60331 282 aa2.71□□□□□ -1.98
LINC00240-204ENST00000607607 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
LINC00240-204ENST00000607607 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
LINC00240-204ENST00000607607 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.98
LINC00240-204ENST00000607607 SMR3BP02814 79 aaPredicted RBP2.64□□□□□ -1.99
LINC00240-204ENST00000607607 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
LINC00240-204ENST00000607607 M0QZ58 72 aa2.56□□□□□ -2
LINC00240-204ENST00000607607 J3QL48 77 aa2.55□□□□□ -2
LINC00240-204ENST00000607607 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
LINC00240-204ENST00000607607 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
LINC00240-204ENST00000607607 LOC100996750A0A140TA64 210 aa2.53□□□□□ -2
LINC00240-204ENST00000607607 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
LINC00240-204ENST00000607607 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
LINC00240-204ENST00000607607 KRTAP10-4P60372 401 aaPredicted RBP2.52□□□□□ -2.01
LINC00240-204ENST00000607607 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
LINC00240-204ENST00000607607 HMCN2Q8NDA2 5059 aa2.51□□□□□ -2.01
LINC00240-204ENST00000607607 R4GN34 69 aa2.5□□□□□ -2.01
LINC00240-204ENST00000607607 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
LINC00240-204ENST00000607607 RYR3Q15413 4870 aa2.47□□□□□ -2.01
LINC00240-204ENST00000607607 RYR2Q92736 4967 aa2.45□□□□□ -2.02
LINC00240-204ENST00000607607 KMT2DO14686 5537 aa2.45□□□□□ -2.02
LINC00240-204ENST00000607607 J3QKU1 62 aa2.44□□□□□ -2.02
LINC00240-204ENST00000607607 RPS29P62273 56 aaKnown RBP2.44□□□□□ -2.02
LINC00240-204ENST00000607607 KIAA1109Q2LD37 5005 aa2.4□□□□□ -2.02
LINC00240-204ENST00000607607 RNF213Q63HN8 5207 aa2.39□□□□□ -2.03
LINC00240-204ENST00000607607 CAMK2N1Q7Z7J9 78 aa2.39□□□□□ -2.03
LINC00240-204ENST00000607607 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
LINC00240-204ENST00000607607 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
LINC00240-204ENST00000607607 HERC2O95714 4834 aa2.34□□□□□ -2.04
LINC00240-204ENST00000607607 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
LINC00240-204ENST00000607607 A0A1B0GVY2 172 aa2.33□□□□□ -2.04
LINC00240-204ENST00000607607 HERC1Q15751 4861 aa2.32□□□□□ -2.04
LINC00240-204ENST00000607607 INE1O15225 51 aa2.3□□□□□ -2.04
LINC00240-204ENST00000607607 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
LINC00240-204ENST00000607607 USH2AO75445 5202 aa2.27□□□□□ -2.05
LINC00240-204ENST00000607607 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
LINC00240-204ENST00000607607 TNP1P09430 55 aa2.26□□□□□ -2.05
LINC00240-204ENST00000607607 MT1HL1P0DM35 61 aa2.25□□□□□ -2.05
LINC00240-204ENST00000607607 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
LINC00240-204ENST00000607607 KRTAP4-5Q9BYR2 181 aa2.23□□□□□ -2.05
LINC00240-204ENST00000607607 BIRC6Q9NR09 4857 aa2.23□□□□□ -2.05
LINC00240-204ENST00000607607 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
LINC00240-204ENST00000607607 Q5VSD8 79 aa2.17□□□□□ -2.06
LINC00240-204ENST00000607607 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
LINC00240-204ENST00000607607 KRTAP4-7Q9BYR0 210 aa2.15□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP19-1Q8IUB9 90 aa2.14□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP23-1A1A580 65 aa2.13□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP9-8Q9BYQ0 159 aa2.13□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
LINC00240-204ENST00000607607 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
LINC00240-204ENST00000607607 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
LINC00240-204ENST00000607607 LCE2AQ5TA79 106 aaPredicted RBP2.07□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP4-8Q9BYQ9 185 aa2.06□□□□□ -2.08
LINC00240-204ENST00000607607 MT1XP80297 61 aa2.05□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.04□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
LINC00240-204ENST00000607607 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
LINC00240-204ENST00000607607 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
LINC00240-204ENST00000607607 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
LINC00240-204ENST00000607607 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
LINC00240-204ENST00000607607 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
LINC00240-204ENST00000607607 LCE2CQ5TA81 110 aa2.01□□□□□ -2.09
LINC00240-204ENST00000607607 KRTAP4-8A0A0G2JLE6 195 aa2□□□□□ -2.09
LINC00240-204ENST00000607607 MT1FP04733 61 aa2□□□□□ -2.09
LINC00240-204ENST00000607607 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
LINC00240-204ENST00000607607 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
LINC00240-204ENST00000607607 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
LINC00240-204ENST00000607607 MT1BP07438 61 aa1.97□□□□□ -2.09
LINC00240-204ENST00000607607 SSPOA2VEC9 5147 aa1.95□□□□□ -2.1
LINC00240-204ENST00000607607 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms