RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
MSH6-211ENST00000606499 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
MSH6-211ENST00000606499 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
MSH6-211ENST00000606499 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
MSH6-211ENST00000606499 M0R2T5 61 aa3.78□□□□□ -1.8
MSH6-211ENST00000606499 H1FX-AS1Q4G0G2 97 aa3.78□□□□□ -1.8
MSH6-211ENST00000606499 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
MSH6-211ENST00000606499 COX7CP15954 63 aa3.77□□□□□ -1.81
MSH6-211ENST00000606499 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
MSH6-211ENST00000606499 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
MSH6-211ENST00000606499 LCA10Q71F78 164 aa3.72□□□□□ -1.81
MSH6-211ENST00000606499 CYSTM1Q9H1C7 97 aa3.72□□□□□ -1.81
MSH6-211ENST00000606499 S4R3F8 94 aa3.72□□□□□ -1.81
MSH6-211ENST00000606499 A8MUN3 132 aa3.71□□□□□ -1.82
MSH6-211ENST00000606499 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
MSH6-211ENST00000606499 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
MSH6-211ENST00000606499 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
MSH6-211ENST00000606499 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
MSH6-211ENST00000606499 H7BZZ5 65 aa3.67□□□□□ -1.82
MSH6-211ENST00000606499 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
MSH6-211ENST00000606499 NDUFC1O43677 76 aa3.66□□□□□ -1.82
MSH6-211ENST00000606499 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
MSH6-211ENST00000606499 MT2AP02795 61 aa3.65□□□□□ -1.83
MSH6-211ENST00000606499 ACYP2P14621 99 aa3.64□□□□□ -1.83
MSH6-211ENST00000606499 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
MSH6-211ENST00000606499 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
MSH6-211ENST00000606499 MT1FP04733 61 aa3.62□□□□□ -1.83
MSH6-211ENST00000606499 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
MSH6-211ENST00000606499 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
MSH6-211ENST00000606499 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
MSH6-211ENST00000606499 COA5Q86WW8 74 aa3.58□□□□□ -1.84
MSH6-211ENST00000606499 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
MSH6-211ENST00000606499 TMEM258P61165 79 aa3.55□□□□□ -1.84
MSH6-211ENST00000606499 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
MSH6-211ENST00000606499 H0YAA0 97 aa3.54□□□□□ -1.84
MSH6-211ENST00000606499 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
MSH6-211ENST00000606499 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
MSH6-211ENST00000606499 ADM2Q7Z4H4 148 aa3.53□□□□□ -1.84
MSH6-211ENST00000606499 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
MSH6-211ENST00000606499 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
MSH6-211ENST00000606499 USH2AO75445 5202 aa3.51□□□□□ -1.85
MSH6-211ENST00000606499 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
MSH6-211ENST00000606499 P0C880 135 aa3.5□□□□□ -1.85
MSH6-211ENST00000606499 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
MSH6-211ENST00000606499 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
MSH6-211ENST00000606499 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
MSH6-211ENST00000606499 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
MSH6-211ENST00000606499 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
MSH6-211ENST00000606499 R4GN34 69 aa3.42□□□□□ -1.86
MSH6-211ENST00000606499 M0QZ58 72 aa3.41□□□□□ -1.86
MSH6-211ENST00000606499 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
MSH6-211ENST00000606499 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
MSH6-211ENST00000606499 SEC61GP60059 68 aa3.4□□□□□ -1.87
MSH6-211ENST00000606499 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
MSH6-211ENST00000606499 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
MSH6-211ENST00000606499 A0A1B0GU69 56 aa3.38□□□□□ -1.87
MSH6-211ENST00000606499 MT1BP07438 61 aa3.38□□□□□ -1.87
MSH6-211ENST00000606499 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
MSH6-211ENST00000606499 Q5VV11 94 aa3.37□□□□□ -1.87
MSH6-211ENST00000606499 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
MSH6-211ENST00000606499 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
MSH6-211ENST00000606499 LINC01558Q9Y6Z2 57 aa3.36□□□□□ -1.87
MSH6-211ENST00000606499 A0A1B0GU33 70 aa3.34□□□□□ -1.87
MSH6-211ENST00000606499 PRR15LQ9BU68 103 aa3.33□□□□□ -1.88
MSH6-211ENST00000606499 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
MSH6-211ENST00000606499 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
MSH6-211ENST00000606499 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
MSH6-211ENST00000606499 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
MSH6-211ENST00000606499 Q1T7F1 81 aa3.3□□□□□ -1.88
MSH6-211ENST00000606499 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
MSH6-211ENST00000606499 A0A0D9SG42 100 aa3.28□□□□□ -1.88
MSH6-211ENST00000606499 PSPHP1O15172 72 aa3.28□□□□□ -1.88
MSH6-211ENST00000606499 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
MSH6-211ENST00000606499 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
MSH6-211ENST00000606499 V9GYY9 64 aa3.28□□□□□ -1.88
MSH6-211ENST00000606499 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
MSH6-211ENST00000606499 A6NN06 94 aa3.26□□□□□ -1.89
MSH6-211ENST00000606499 A8MU10 97 aa3.25□□□□□ -1.89
MSH6-211ENST00000606499 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
MSH6-211ENST00000606499 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
MSH6-211ENST00000606499 UQCR11O14957 56 aa3.23□□□□□ -1.89
MSH6-211ENST00000606499 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
MSH6-211ENST00000606499 MT1XP80297 61 aa3.22□□□□□ -1.89
MSH6-211ENST00000606499 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
MSH6-211ENST00000606499 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
MSH6-211ENST00000606499 MIR22HGQ0VDD5 57 aa3.19□□□□□ -1.9
MSH6-211ENST00000606499 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
MSH6-211ENST00000606499 CAMK2N1Q7Z7J9 78 aa3.18□□□□□ -1.9
MSH6-211ENST00000606499 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
MSH6-211ENST00000606499 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
MSH6-211ENST00000606499 A6NED7 52 aa3.17□□□□□ -1.9
MSH6-211ENST00000606499 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
MSH6-211ENST00000606499 KMT2DO14686 5537 aa3.09□□□□□ -1.91
MSH6-211ENST00000606499 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
MSH6-211ENST00000606499 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
MSH6-211ENST00000606499 CDC42SE1Q9NRR8 79 aa3.07□□□□□ -1.92
MSH6-211ENST00000606499 K7ERS5 55 aa3.06□□□□□ -1.92
MSH6-211ENST00000606499 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
MSH6-211ENST00000606499 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
MSH6-211ENST00000606499 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms