RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
HLA-F-230ENST00000606273 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
HLA-F-230ENST00000606273 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
HLA-F-230ENST00000606273 LCE1FQ5T754 118 aa6.1□□□□□ -1.43
HLA-F-230ENST00000606273 FAM240AA0A1B0GVK7 77 aa6.08□□□□□ -1.44
HLA-F-230ENST00000606273 ACYP1P07311 99 aa6.08□□□□□ -1.44
HLA-F-230ENST00000606273 PCP4P48539 62 aa6.08□□□□□ -1.44
HLA-F-230ENST00000606273 CASC2Q6XLA1 102 aa6.08□□□□□ -1.44
HLA-F-230ENST00000606273 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
HLA-F-230ENST00000606273 CXCL6P80162 114 aa6.07□□□□□ -1.44
HLA-F-230ENST00000606273 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
HLA-F-230ENST00000606273 NDUFS5O43920 106 aa6.05□□□□□ -1.44
HLA-F-230ENST00000606273 HRES1P13985 223 aa6.05□□□□□ -1.44
HLA-F-230ENST00000606273 Q5W150 140 aa6.04□□□□□ -1.44
HLA-F-230ENST00000606273 SPINK7P58062 85 aa6.03□□□□□ -1.44
HLA-F-230ENST00000606273 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
HLA-F-230ENST00000606273 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
HLA-F-230ENST00000606273 A0A087WVE0 104 aa5.95□□□□□ -1.46
HLA-F-230ENST00000606273 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
HLA-F-230ENST00000606273 KRTAP4-4Q9BYR3 166 aa5.95□□□□□ -1.46
HLA-F-230ENST00000606273 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
HLA-F-230ENST00000606273 J3QR89 54 aa5.92□□□□□ -1.46
HLA-F-230ENST00000606273 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
HLA-F-230ENST00000606273 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
HLA-F-230ENST00000606273 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
HLA-F-230ENST00000606273 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
HLA-F-230ENST00000606273 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
HLA-F-230ENST00000606273 K7ERU9 68 aa5.83□□□□□ -1.48
HLA-F-230ENST00000606273 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
HLA-F-230ENST00000606273 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
HLA-F-230ENST00000606273 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
HLA-F-230ENST00000606273 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
HLA-F-230ENST00000606273 C4orf26Q17RF5 130 aa5.82□□□□□ -1.48
HLA-F-230ENST00000606273 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
HLA-F-230ENST00000606273 KMT2DO14686 5537 aa5.81□□□□□ -1.48
HLA-F-230ENST00000606273 UQCRQO14949 82 aa5.79□□□□□ -1.48
HLA-F-230ENST00000606273 OCR1Q9BZK8 76 aa5.79□□□□□ -1.48
HLA-F-230ENST00000606273 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
HLA-F-230ENST00000606273 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
HLA-F-230ENST00000606273 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
HLA-F-230ENST00000606273 H0Y9P7 68 aa5.77□□□□□ -1.49
HLA-F-230ENST00000606273 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
HLA-F-230ENST00000606273 LOC101927531A0A1B0GV80 90 aa5.74□□□□□ -1.49
HLA-F-230ENST00000606273 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
HLA-F-230ENST00000606273 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
HLA-F-230ENST00000606273 ATOX1O00244 68 aa5.7□□□□□ -1.5
HLA-F-230ENST00000606273 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
HLA-F-230ENST00000606273 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
HLA-F-230ENST00000606273 KLKP1Q107X0 134 aa5.69□□□□□ -1.5
HLA-F-230ENST00000606273 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
HLA-F-230ENST00000606273 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
HLA-F-230ENST00000606273 A6NN06 94 aa5.66□□□□□ -1.5
HLA-F-230ENST00000606273 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
HLA-F-230ENST00000606273 MP68P56378 58 aa5.65□□□□□ -1.5
HLA-F-230ENST00000606273 LCA10Q71F78 164 aa5.62□□□□□ -1.51
HLA-F-230ENST00000606273 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
HLA-F-230ENST00000606273 S4R3F8 94 aa5.61□□□□□ -1.51
HLA-F-230ENST00000606273 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
HLA-F-230ENST00000606273 H3BPC8 53 aa5.59□□□□□ -1.51
HLA-F-230ENST00000606273 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
HLA-F-230ENST00000606273 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
HLA-F-230ENST00000606273 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
HLA-F-230ENST00000606273 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
HLA-F-230ENST00000606273 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
HLA-F-230ENST00000606273 A8MUN3 132 aa5.5□□□□□ -1.53
HLA-F-230ENST00000606273 MT1BP07438 61 aa5.49□□□□□ -1.53
HLA-F-230ENST00000606273 SPRR2EP22531 72 aa5.49□□□□□ -1.53
HLA-F-230ENST00000606273 SPRR2BP35325 72 aa5.49□□□□□ -1.53
HLA-F-230ENST00000606273 SPRR2AP35326 72 aa5.49□□□□□ -1.53
HLA-F-230ENST00000606273 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
HLA-F-230ENST00000606273 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
HLA-F-230ENST00000606273 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
HLA-F-230ENST00000606273 NDUFC1O43677 76 aa5.44□□□□□ -1.54
HLA-F-230ENST00000606273 Q5VV11 94 aa5.42□□□□□ -1.54
HLA-F-230ENST00000606273 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
HLA-F-230ENST00000606273 COX7CP15954 63 aa5.39□□□□□ -1.55
HLA-F-230ENST00000606273 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
HLA-F-230ENST00000606273 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
HLA-F-230ENST00000606273 H0YAA0 97 aa5.35□□□□□ -1.55
HLA-F-230ENST00000606273 ACYP2P14621 99 aa5.35□□□□□ -1.55
HLA-F-230ENST00000606273 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
HLA-F-230ENST00000606273 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
HLA-F-230ENST00000606273 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
HLA-F-230ENST00000606273 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
HLA-F-230ENST00000606273 SPRR2DP22532 72 aa5.31□□□□□ -1.56
HLA-F-230ENST00000606273 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
HLA-F-230ENST00000606273 H7BZZ5 65 aa5.29□□□□□ -1.56
HLA-F-230ENST00000606273 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
HLA-F-230ENST00000606273 P0C880 135 aa5.28□□□□□ -1.56
HLA-F-230ENST00000606273 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
HLA-F-230ENST00000606273 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
HLA-F-230ENST00000606273 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
HLA-F-230ENST00000606273 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
HLA-F-230ENST00000606273 CHKB-CPT1BH3BT56 60 aa5.24□□□□□ -1.57
HLA-F-230ENST00000606273 COA5Q86WW8 74 aa5.21□□□□□ -1.58
HLA-F-230ENST00000606273 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
HLA-F-230ENST00000606273 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
HLA-F-230ENST00000606273 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
HLA-F-230ENST00000606273 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
HLA-F-230ENST00000606273 M0QZ58 72 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms