RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
LSM1P2-201ENST00000604911 KMT2CQ8NEZ4 4911 aaKnown RBP2.59□□□□□ -1.99
LSM1P2-201ENST00000604911 CELSR2Q9HCU4 2923 aa2.59□□□□□ -1.99
LSM1P2-201ENST00000604911 BSNQ9UPA5 3926 aa2.59□□□□□ -1.99
LSM1P2-201ENST00000604911 MTORP42345 2549 aa2.58□□□□□ -2
LSM1P2-201ENST00000604911 CUBNO60494 3623 aa2.57□□□□□ -2
LSM1P2-201ENST00000604911 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
LSM1P2-201ENST00000604911 KRTAP5-8O75690 187 aa2.56□□□□□ -2
LSM1P2-201ENST00000604911 NBEAL2Q6ZNJ1 2754 aa2.55□□□□□ -2
LSM1P2-201ENST00000604911 MAP1AP78559 2803 aaPredicted RBP2.55□□□□□ -2
LSM1P2-201ENST00000604911 CENPEQ02224 2701 aa2.55□□□□□ -2
LSM1P2-201ENST00000604911 ANKHD1Q8IWZ3 2542 aaKnown RBP2.54□□□□□ -2
LSM1P2-201ENST00000604911 RP1L1Q8IWN7 2480 aaPredicted RBP2.54□□□□□ -2
LSM1P2-201ENST00000604911 STAB1Q9NY15 2570 aa2.54□□□□□ -2
LSM1P2-201ENST00000604911 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
LSM1P2-201ENST00000604911 NIPBLQ6KC79 2804 aaeCLIP2.54□□□□□ -2
LSM1P2-201ENST00000604911 FLNAP21333 2647 aaKnown RBP2.54□□□□□ -2
LSM1P2-201ENST00000604911 HTN3P15516 51 aa2.53□□□□□ -2
LSM1P2-201ENST00000604911 CCDC168Q8NDH2 2452 aa2.53□□□□□ -2
LSM1P2-201ENST00000604911 APCP25054 2843 aa2.53□□□□□ -2
LSM1P2-201ENST00000604911 PKD1L1Q8TDX9 2849 aa2.53□□□□□ -2
LSM1P2-201ENST00000604911 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
LSM1P2-201ENST00000604911 VWFP04275 2813 aa2.5□□□□□ -2.01
LSM1P2-201ENST00000604911 TGP01266 2768 aa2.49□□□□□ -2.01
LSM1P2-201ENST00000604911 PRRC2CQ9Y520 2896 aaKnown RBP2.48□□□□□ -2.01
LSM1P2-201ENST00000604911 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
LSM1P2-201ENST00000604911 ZNF469Q96JG9 3925 aaPredicted RBP2.48□□□□□ -2.01
LSM1P2-201ENST00000604911 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
LSM1P2-201ENST00000604911 COL6A5A8TX70 2615 aa2.47□□□□□ -2.01
LSM1P2-201ENST00000604911 ANK2Q01484 3957 aa2.47□□□□□ -2.01
LSM1P2-201ENST00000604911 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
LSM1P2-201ENST00000604911 RYR1P21817 5038 aa2.46□□□□□ -2.02
LSM1P2-201ENST00000604911 DEFB135Q30KP9 77 aa2.45□□□□□ -2.02
LSM1P2-201ENST00000604911 HERC2O95714 4834 aa2.44□□□□□ -2.02
LSM1P2-201ENST00000604911 TLN2Q9Y4G6 2542 aa2.44□□□□□ -2.02
LSM1P2-201ENST00000604911 DEFB4AO15263 64 aa2.43□□□□□ -2.02
LSM1P2-201ENST00000604911 RPS29P62273 56 aaKnown RBP2.43□□□□□ -2.02
LSM1P2-201ENST00000604911 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
LSM1P2-201ENST00000604911 NBASA2RRP1 2371 aa2.43□□□□□ -2.02
LSM1P2-201ENST00000604911 RYR2Q92736 4967 aa2.42□□□□□ -2.02
LSM1P2-201ENST00000604911 ACANP16112 2415 aa2.42□□□□□ -2.02
LSM1P2-201ENST00000604911 DCHS2Q6V1P9 2916 aa2.42□□□□□ -2.02
LSM1P2-201ENST00000604911 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
LSM1P2-201ENST00000604911 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
LSM1P2-201ENST00000604911 VPS13CQ709C8 3753 aa2.41□□□□□ -2.02
LSM1P2-201ENST00000604911 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
LSM1P2-201ENST00000604911 SVEP1Q4LDE5 3571 aa2.4□□□□□ -2.02
LSM1P2-201ENST00000604911 TACC2O95359 2948 aa2.4□□□□□ -2.03
LSM1P2-201ENST00000604911 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
LSM1P2-201ENST00000604911 MXRA5Q9NR99 2828 aa2.39□□□□□ -2.03
LSM1P2-201ENST00000604911 TNP1P09430 55 aa2.38□□□□□ -2.03
LSM1P2-201ENST00000604911 SONP18583 2426 aaKnown RBP2.37□□□□□ -2.03
LSM1P2-201ENST00000604911 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
LSM1P2-201ENST00000604911 ANK3Q12955 4377 aaKnown RBP2.36□□□□□ -2.03
LSM1P2-201ENST00000604911 SACSQ9NZJ4 4579 aa2.33□□□□□ -2.04
LSM1P2-201ENST00000604911 TENM1Q9UKZ4 2725 aa2.32□□□□□ -2.04
LSM1P2-201ENST00000604911 DYNC2H1Q8NCM8 4307 aaKnown RBP2.32□□□□□ -2.04
LSM1P2-201ENST00000604911 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
LSM1P2-201ENST00000604911 TRRAPQ9Y4A5 3859 aa2.29□□□□□ -2.04
LSM1P2-201ENST00000604911 C9orf92A6NGG3 77 aa2.29□□□□□ -2.04
LSM1P2-201ENST00000604911 SMR3AQ99954 134 aa2.29□□□□□ -2.04
LSM1P2-201ENST00000604911 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
LSM1P2-201ENST00000604911 ZANQ9Y493 2812 aa2.28□□□□□ -2.04
LSM1P2-201ENST00000604911 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
LSM1P2-201ENST00000604911 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
LSM1P2-201ENST00000604911 HERC1Q15751 4861 aa2.26□□□□□ -2.05
LSM1P2-201ENST00000604911 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
LSM1P2-201ENST00000604911 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
LSM1P2-201ENST00000604911 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
LSM1P2-201ENST00000604911 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.06
LSM1P2-201ENST00000604911 CMYA5Q8N3K9 4069 aa2.2□□□□□ -2.06
LSM1P2-201ENST00000604911 TENM3Q9P273 2699 aa2.19□□□□□ -2.06
LSM1P2-201ENST00000604911 HRNRQ86YZ3 2850 aaPredicted RBP2.19□□□□□ -2.06
LSM1P2-201ENST00000604911 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
LSM1P2-201ENST00000604911 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
LSM1P2-201ENST00000604911 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
LSM1P2-201ENST00000604911 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
LSM1P2-201ENST00000604911 LYSTQ99698 3801 aa2.13□□□□□ -2.07
LSM1P2-201ENST00000604911 CSMD3Q7Z407 3707 aa2.12□□□□□ -2.07
LSM1P2-201ENST00000604911 DNAH9Q9NYC9 4486 aa2.11□□□□□ -2.07
LSM1P2-201ENST00000604911 MUC2Q02817 5179 aa2.11□□□□□ -2.07
LSM1P2-201ENST00000604911 HECTD4Q9Y4D8 3996 aa2.1□□□□□ -2.07
LSM1P2-201ENST00000604911 M0R2T5 61 aa2.09□□□□□ -2.07
LSM1P2-201ENST00000604911 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
LSM1P2-201ENST00000604911 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
LSM1P2-201ENST00000604911 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
LSM1P2-201ENST00000604911 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
LSM1P2-201ENST00000604911 DNAH8Q96JB1 4490 aa2.08□□□□□ -2.08
LSM1P2-201ENST00000604911 STAB2Q8WWQ8 2551 aa2.06□□□□□ -2.08
LSM1P2-201ENST00000604911 DYNC1H1Q14204 4646 aaKnown RBP2.04□□□□□ -2.08
LSM1P2-201ENST00000604911 HMCN2Q8NDA2 5059 aa2.04□□□□□ -2.08
LSM1P2-201ENST00000604911 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.08
LSM1P2-201ENST00000604911 STARD9Q9P2P6 4700 aa2.03□□□□□ -2.08
LSM1P2-201ENST00000604911 PLECQ15149 4684 aaKnown RBP2.03□□□□□ -2.08
LSM1P2-201ENST00000604911 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
LSM1P2-201ENST00000604911 HSPG2P98160 4391 aa2.02□□□□□ -2.09
LSM1P2-201ENST00000604911 DNAH3Q8TD57 4116 aa2.02□□□□□ -2.09
LSM1P2-201ENST00000604911 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
LSM1P2-201ENST00000604911 DNAH7Q8WXX0 4024 aa2.01□□□□□ -2.09
LSM1P2-201ENST00000604911 HUWE1Q7Z6Z7 4374 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms