RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
NEDD8-MDP1-203ENST00000604306 S4R3F8 94 aa6.14□□□□□ -1.43
NEDD8-MDP1-203ENST00000604306 LCA10Q71F78 164 aa6.09□□□□□ -1.43
NEDD8-MDP1-203ENST00000604306 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
NEDD8-MDP1-203ENST00000604306 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
NEDD8-MDP1-203ENST00000604306 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
NEDD8-MDP1-203ENST00000604306 A0A1B0GU69 56 aa6.03□□□□□ -1.44
NEDD8-MDP1-203ENST00000604306 SEC61GP60059 68 aa6.03□□□□□ -1.44
NEDD8-MDP1-203ENST00000604306 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
NEDD8-MDP1-203ENST00000604306 Q5VV11 94 aa6□□□□□ -1.45
NEDD8-MDP1-203ENST00000604306 PSPHP1O15172 72 aa5.99□□□□□ -1.45
NEDD8-MDP1-203ENST00000604306 H0YAA0 97 aa5.98□□□□□ -1.45
NEDD8-MDP1-203ENST00000604306 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
NEDD8-MDP1-203ENST00000604306 UQCR11O14957 56 aa5.89□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 MUC2Q02817 5179 aa5.87□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 A6NED7 52 aa5.86□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 A0A1B0GU33 70 aa5.84□□□□□ -1.47
NEDD8-MDP1-203ENST00000604306 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 MT1HP80294 61 aa5.8□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
NEDD8-MDP1-203ENST00000604306 P0C880 135 aa5.77□□□□□ -1.49
NEDD8-MDP1-203ENST00000604306 M0QZ58 72 aa5.76□□□□□ -1.49
NEDD8-MDP1-203ENST00000604306 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
NEDD8-MDP1-203ENST00000604306 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
NEDD8-MDP1-203ENST00000604306 M0R2T5 61 aa5.71□□□□□ -1.5
NEDD8-MDP1-203ENST00000604306 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
NEDD8-MDP1-203ENST00000604306 R4GN34 69 aa5.66□□□□□ -1.5
NEDD8-MDP1-203ENST00000604306 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
NEDD8-MDP1-203ENST00000604306 A8MU10 97 aa5.61□□□□□ -1.51
NEDD8-MDP1-203ENST00000604306 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
NEDD8-MDP1-203ENST00000604306 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
NEDD8-MDP1-203ENST00000604306 A6NN06 94 aa5.58□□□□□ -1.52
NEDD8-MDP1-203ENST00000604306 K7ERS5 55 aa5.58□□□□□ -1.52
NEDD8-MDP1-203ENST00000604306 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
NEDD8-MDP1-203ENST00000604306 MT2AP02795 61 aa5.57□□□□□ -1.52
NEDD8-MDP1-203ENST00000604306 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
NEDD8-MDP1-203ENST00000604306 MT1FP04733 61 aa5.52□□□□□ -1.53
NEDD8-MDP1-203ENST00000604306 A0A0D9SG42 100 aa5.51□□□□□ -1.53
NEDD8-MDP1-203ENST00000604306 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
NEDD8-MDP1-203ENST00000604306 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
NEDD8-MDP1-203ENST00000604306 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
NEDD8-MDP1-203ENST00000604306 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 LINC01554Q52M75 96 aa5.44□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.54
NEDD8-MDP1-203ENST00000604306 PLAC4Q8WY50 150 aa5.32□□□□□ -1.56
NEDD8-MDP1-203ENST00000604306 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
NEDD8-MDP1-203ENST00000604306 ROMO1P60602 79 aa5.3□□□□□ -1.56
NEDD8-MDP1-203ENST00000604306 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
NEDD8-MDP1-203ENST00000604306 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
NEDD8-MDP1-203ENST00000604306 MT1BP07438 61 aa5.25□□□□□ -1.57
NEDD8-MDP1-203ENST00000604306 LCE2BO14633 110 aa5.21□□□□□ -1.58
NEDD8-MDP1-203ENST00000604306 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
NEDD8-MDP1-203ENST00000604306 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
NEDD8-MDP1-203ENST00000604306 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
NEDD8-MDP1-203ENST00000604306 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
NEDD8-MDP1-203ENST00000604306 MT1XP80297 61 aa5.09□□□□□ -1.59
NEDD8-MDP1-203ENST00000604306 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
NEDD8-MDP1-203ENST00000604306 TNP1P09430 55 aa5.07□□□□□ -1.6
NEDD8-MDP1-203ENST00000604306 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
NEDD8-MDP1-203ENST00000604306 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
NEDD8-MDP1-203ENST00000604306 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
NEDD8-MDP1-203ENST00000604306 KRTAP19-6Q3LI70 58 aa4.98□□□□□ -1.61
NEDD8-MDP1-203ENST00000604306 USH2AO75445 5202 aa4.97□□□□□ -1.61
NEDD8-MDP1-203ENST00000604306 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
NEDD8-MDP1-203ENST00000604306 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
NEDD8-MDP1-203ENST00000604306 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
NEDD8-MDP1-203ENST00000604306 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
NEDD8-MDP1-203ENST00000604306 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
NEDD8-MDP1-203ENST00000604306 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
NEDD8-MDP1-203ENST00000604306 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
NEDD8-MDP1-203ENST00000604306 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
NEDD8-MDP1-203ENST00000604306 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
NEDD8-MDP1-203ENST00000604306 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
NEDD8-MDP1-203ENST00000604306 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
NEDD8-MDP1-203ENST00000604306 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
NEDD8-MDP1-203ENST00000604306 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
NEDD8-MDP1-203ENST00000604306 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
NEDD8-MDP1-203ENST00000604306 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
NEDD8-MDP1-203ENST00000604306 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
NEDD8-MDP1-203ENST00000604306 KMT2DO14686 5537 aa4.47□□□□□ -1.69
NEDD8-MDP1-203ENST00000604306 MT1EP04732 61 aa4.47□□□□□ -1.69
NEDD8-MDP1-203ENST00000604306 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
NEDD8-MDP1-203ENST00000604306 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
NEDD8-MDP1-203ENST00000604306 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
NEDD8-MDP1-203ENST00000604306 MT1LQ93083 61 aa4.38□□□□□ -1.71
NEDD8-MDP1-203ENST00000604306 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
NEDD8-MDP1-203ENST00000604306 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
NEDD8-MDP1-203ENST00000604306 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
NEDD8-MDP1-203ENST00000604306 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms