RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 A0A087WVE0 104 aa11.67□□□□□ -0.54
PNKP-216ENST00000601816 H0Y9P7 68 aa11.66□□□□□ -0.54
PNKP-216ENST00000601816 ATOX1O00244 68 aa11.65□□□□□ -0.54
PNKP-216ENST00000601816 A6NN06 94 aa11.62□□□□□ -0.55
PNKP-216ENST00000601816 KRTAP6-3Q3LI67 103 aa11.62□□□□□ -0.55
PNKP-216ENST00000601816 LINC00643Q86TS7 51 aa11.59□□□□□ -0.55
PNKP-216ENST00000601816 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
PNKP-216ENST00000601816 CRIPTQ9P021 101 aa11.53□□□□□ -0.56
PNKP-216ENST00000601816 NDUFC1O43677 76 aa11.52□□□□□ -0.57
PNKP-216ENST00000601816 A8MUN3 132 aa11.46□□□□□ -0.57
PNKP-216ENST00000601816 LINC00208Q96KT6 92 aa11.46□□□□□ -0.57
PNKP-216ENST00000601816 KRTAP10-5P60370 271 aa11.45□□□□□ -0.58
PNKP-216ENST00000601816 H0YAA0 97 aa11.42□□□□□ -0.58
PNKP-216ENST00000601816 MP68P56378 58 aa11.4□□□□□ -0.58
PNKP-216ENST00000601816 A0A1B0GV90 55 aa11.39□□□□□ -0.59
PNKP-216ENST00000601816 OCR1Q9BZK8 76 aa11.39□□□□□ -0.59
PNKP-216ENST00000601816 ADM2Q7Z4H4 148 aa11.31□□□□□ -0.6
PNKP-216ENST00000601816 J3QR89 54 aa11.23□□□□□ -0.61
PNKP-216ENST00000601816 NEBP20929 6669 aa11.22□□□□□ -0.61
PNKP-216ENST00000601816 H3BPC8 53 aa11.21□□□□□ -0.61
PNKP-216ENST00000601816 SCGB1A1P11684 91 aa11.15□□□□□ -0.62
PNKP-216ENST00000601816 DMAC1Q96GE9 116 aa11.1□□□□□ -0.63
PNKP-216ENST00000601816 MUC12Q9UKN1 5478 aa11.08□□□□□ -0.64
PNKP-216ENST00000601816 KRTAP5-9P26371 169 aa11.05□□□□□ -0.64
PNKP-216ENST00000601816 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
PNKP-216ENST00000601816 R4GN34 69 aa11.04□□□□□ -0.64
PNKP-216ENST00000601816 P0C880 135 aa11.03□□□□□ -0.64
PNKP-216ENST00000601816 PRO2289Q9P1D8 64 aa11.02□□□□□ -0.65
PNKP-216ENST00000601816 PLAC4Q8WY50 150 aa11.01□□□□□ -0.65
PNKP-216ENST00000601816 MT1XP80297 61 aa10.95□□□□□ -0.66
PNKP-216ENST00000601816 M0QZ58 72 aa10.94□□□□□ -0.66
PNKP-216ENST00000601816 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
PNKP-216ENST00000601816 KMT2DO14686 5537 aa10.88□□□□□ -0.67
PNKP-216ENST00000601816 TRAV7A0A075B6U4 112 aa10.88□□□□□ -0.67
PNKP-216ENST00000601816 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
PNKP-216ENST00000601816 ACYP2P14621 99 aa10.83□□□□□ -0.68
PNKP-216ENST00000601816 KRTAP20-1Q3LI63 56 aa10.81□□□□□ -0.68
PNKP-216ENST00000601816 SMIM20Q8N5G0 67 aa10.81□□□□□ -0.68
PNKP-216ENST00000601816 LINC01554Q52M75 96 aa10.8□□□□□ -0.68
PNKP-216ENST00000601816 MDN1Q9NU22 5596 aa10.79□□□□□ -0.68
PNKP-216ENST00000601816 K7ERU9 68 aa10.74□□□□□ -0.69
PNKP-216ENST00000601816 SPTSSBQ8NFR3 76 aa10.74□□□□□ -0.69
PNKP-216ENST00000601816 SPRR2FQ96RM1 72 aa10.73□□□□□ -0.69
PNKP-216ENST00000601816 KRTAP12-2P59991 146 aa10.71□□□□□ -0.69
PNKP-216ENST00000601816 KRTAP8-1Q8IUC2 63 aa10.67□□□□□ -0.7
PNKP-216ENST00000601816 CHKB-CPT1BH3BT56 60 aa10.65□□□□□ -0.7
PNKP-216ENST00000601816 SPRR2EP22531 72 aa10.6□□□□□ -0.71
PNKP-216ENST00000601816 SPRR2BP35325 72 aa10.6□□□□□ -0.71
PNKP-216ENST00000601816 SPRR2AP35326 72 aa10.6□□□□□ -0.71
PNKP-216ENST00000601816 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
PNKP-216ENST00000601816 KRTAP2-3P0C7H8 128 aa10.5□□□□□ -0.73
PNKP-216ENST00000601816 KRTAP2-4Q9BYR9 128 aa10.5□□□□□ -0.73
PNKP-216ENST00000601816 KRTAP4-8A0A0G2JLE6 195 aa10.49□□□□□ -0.73
PNKP-216ENST00000601816 KRTAP4-8Q9BYQ9 185 aa10.49□□□□□ -0.73
PNKP-216ENST00000601816 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
PNKP-216ENST00000601816 KRTAP10-7P60409 375 aaPredicted RBP10.44□□□□□ -0.74
PNKP-216ENST00000601816 LCE1AQ5T7P2 110 aa10.43□□□□□ -0.74
PNKP-216ENST00000601816 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
PNKP-216ENST00000601816 KRTAP10-12P60413 245 aa10.39□□□□□ -0.75
PNKP-216ENST00000601816 KRTAP13-4Q3LI77 160 aa10.26□□□□□ -0.77
PNKP-216ENST00000601816 SPRR2DP22532 72 aa10.24□□□□□ -0.77
PNKP-216ENST00000601816 COA5Q86WW8 74 aa10.19□□□□□ -0.78
PNKP-216ENST00000601816 KRTAP2-2Q9BYT5 123 aa10.16□□□□□ -0.78
PNKP-216ENST00000601816 KRTAP2-1Q9BYU5 128 aa10.16□□□□□ -0.78
PNKP-216ENST00000601816 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
PNKP-216ENST00000601816 SEC61GP60059 68 aa10.07□□□□□ -0.8
PNKP-216ENST00000601816 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
PNKP-216ENST00000601816 COX7CP15954 63 aa10.04□□□□□ -0.8
PNKP-216ENST00000601816 A0A0D9SG42 100 aa9.97□□□□□ -0.81
PNKP-216ENST00000601816 LCE3BQ5TA77 95 aa9.96□□□□□ -0.82
PNKP-216ENST00000601816 H7BZZ5 65 aa9.92□□□□□ -0.82
PNKP-216ENST00000601816 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
PNKP-216ENST00000601816 A0A1B0GU33 70 aa9.89□□□□□ -0.83
PNKP-216ENST00000601816 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
PNKP-216ENST00000601816 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
PNKP-216ENST00000601816 KRTAP19-7Q3SYF9 63 aa9.78□□□□□ -0.84
PNKP-216ENST00000601816 KRTAP12-1P59990 96 aa9.75□□□□□ -0.85
PNKP-216ENST00000601816 MT1EP04732 61 aa9.71□□□□□ -0.86
PNKP-216ENST00000601816 A0A1B0GU69 56 aa9.69□□□□□ -0.86
PNKP-216ENST00000601816 LCE5AQ5TCM9 118 aa9.67□□□□□ -0.86
PNKP-216ENST00000601816 KRTAP19-3Q7Z4W3 81 aa9.65□□□□□ -0.86
PNKP-216ENST00000601816 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
PNKP-216ENST00000601816 SMIM26A0A096LP01 95 aa9.63□□□□□ -0.87
PNKP-216ENST00000601816 DSTQ03001 7570 aaKnown RBP9.55□□□□□ -0.88
PNKP-216ENST00000601816 A8MU10 97 aa9.53□□□□□ -0.88
PNKP-216ENST00000601816 KRTAP19-5Q3LI72 72 aa9.53□□□□□ -0.88
PNKP-216ENST00000601816 CCDC179H3BU77 68 aa9.44□□□□□ -0.9
PNKP-216ENST00000601816 MT1GP13640 62 aa9.41□□□□□ -0.9
PNKP-216ENST00000601816 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
PNKP-216ENST00000601816 PRR15LQ9BU68 103 aa9.38□□□□□ -0.91
PNKP-216ENST00000601816 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
PNKP-216ENST00000601816 TNP1P09430 55 aa9.33□□□□□ -0.92
PNKP-216ENST00000601816 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
PNKP-216ENST00000601816 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
PNKP-216ENST00000601816 MT1LQ93083 61 aa9.27□□□□□ -0.93
PNKP-216ENST00000601816 KRTAP4-9Q9BYQ8 210 aa9.27□□□□□ -0.93
PNKP-216ENST00000601816 MT1MQ8N339 61 aa9.25□□□□□ -0.93
PNKP-216ENST00000601816 LINC01558Q9Y6Z2 57 aa9.25□□□□□ -0.93
PNKP-216ENST00000601816 GPR98Q8WXG9 6306 aa9.13□□□□□ -0.95
PNKP-216ENST00000601816 TMEM258P61165 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms