RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
FARP1-229ENST00000600190 H3BPC8 53 aa8.97□□□□□ -0.97
FARP1-229ENST00000600190 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
FARP1-229ENST00000600190 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
FARP1-229ENST00000600190 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
FARP1-229ENST00000600190 S4R3F8 94 aa8.91□□□□□ -0.98
FARP1-229ENST00000600190 KRTAP6-3Q3LI67 103 aa8.87□□□□□ -0.99
FARP1-229ENST00000600190 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
FARP1-229ENST00000600190 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
FARP1-229ENST00000600190 CSAG1Q6PB30 78 aa8.83□□□□□ -1
FARP1-229ENST00000600190 A8MUN3 132 aa8.82□□□□□ -1
FARP1-229ENST00000600190 KLKP1Q107X0 134 aa8.81□□□□□ -1
FARP1-229ENST00000600190 LCA10Q71F78 164 aa8.78□□□□□ -1
FARP1-229ENST00000600190 NDUFC1O43677 76 aa8.72□□□□□ -1.01
FARP1-229ENST00000600190 NEBP20929 6669 aa8.69□□□□□ -1.02
FARP1-229ENST00000600190 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
FARP1-229ENST00000600190 MUC12Q9UKN1 5478 aa8.62□□□□□ -1.03
FARP1-229ENST00000600190 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
FARP1-229ENST00000600190 ACYP2P14621 99 aa8.6□□□□□ -1.03
FARP1-229ENST00000600190 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
FARP1-229ENST00000600190 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
FARP1-229ENST00000600190 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
FARP1-229ENST00000600190 A6NN06 94 aa8.58□□□□□ -1.04
FARP1-229ENST00000600190 COX7CP15954 63 aa8.52□□□□□ -1.05
FARP1-229ENST00000600190 MT1BP07438 61 aa8.51□□□□□ -1.05
FARP1-229ENST00000600190 Q5VV11 94 aa8.51□□□□□ -1.05
FARP1-229ENST00000600190 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
FARP1-229ENST00000600190 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
FARP1-229ENST00000600190 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
FARP1-229ENST00000600190 H0YAA0 97 aa8.46□□□□□ -1.06
FARP1-229ENST00000600190 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
FARP1-229ENST00000600190 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
FARP1-229ENST00000600190 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
FARP1-229ENST00000600190 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
FARP1-229ENST00000600190 KRTAP20-1Q3LI63 56 aa8.4□□□□□ -1.06
FARP1-229ENST00000600190 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
FARP1-229ENST00000600190 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
FARP1-229ENST00000600190 MDN1Q9NU22 5596 aa8.35□□□□□ -1.07
FARP1-229ENST00000600190 KMT2DO14686 5537 aa8.32□□□□□ -1.08
FARP1-229ENST00000600190 KRTAP5-9P26371 169 aa8.31□□□□□ -1.08
FARP1-229ENST00000600190 H7BZZ5 65 aa8.24□□□□□ -1.09
FARP1-229ENST00000600190 R4GN34 69 aa8.23□□□□□ -1.09
FARP1-229ENST00000600190 COA5Q86WW8 74 aa8.2□□□□□ -1.1
FARP1-229ENST00000600190 P0C880 135 aa8.17□□□□□ -1.1
FARP1-229ENST00000600190 CCDC179H3BU77 68 aa8.15□□□□□ -1.1
FARP1-229ENST00000600190 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
FARP1-229ENST00000600190 M0QZ58 72 aa8.14□□□□□ -1.11
FARP1-229ENST00000600190 SEC61GP60059 68 aa8.12□□□□□ -1.11
FARP1-229ENST00000600190 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
FARP1-229ENST00000600190 KRTAP2-3P0C7H8 128 aa8.08□□□□□ -1.12
FARP1-229ENST00000600190 KRTAP2-4Q9BYR9 128 aa8.08□□□□□ -1.12
FARP1-229ENST00000600190 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
FARP1-229ENST00000600190 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
FARP1-229ENST00000600190 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
FARP1-229ENST00000600190 SPRR2FQ96RM1 72 aa8.03□□□□□ -1.12
FARP1-229ENST00000600190 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
FARP1-229ENST00000600190 SPRR2EP22531 72 aa7.99□□□□□ -1.13
FARP1-229ENST00000600190 SPRR2BP35325 72 aa7.99□□□□□ -1.13
FARP1-229ENST00000600190 SPRR2AP35326 72 aa7.99□□□□□ -1.13
FARP1-229ENST00000600190 TMEM258P61165 79 aa7.95□□□□□ -1.14
FARP1-229ENST00000600190 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
FARP1-229ENST00000600190 MT1XP80297 61 aa7.9□□□□□ -1.14
FARP1-229ENST00000600190 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
FARP1-229ENST00000600190 A0A1B0GU69 56 aa7.87□□□□□ -1.15
FARP1-229ENST00000600190 A0A1B0GU33 70 aa7.82□□□□□ -1.16
FARP1-229ENST00000600190 LCE1AQ5T7P2 110 aa7.81□□□□□ -1.16
FARP1-229ENST00000600190 KRTAP2-2Q9BYT5 123 aa7.81□□□□□ -1.16
FARP1-229ENST00000600190 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
FARP1-229ENST00000600190 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
FARP1-229ENST00000600190 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
FARP1-229ENST00000600190 SPRR2DP22532 72 aa7.73□□□□□ -1.17
FARP1-229ENST00000600190 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
FARP1-229ENST00000600190 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
FARP1-229ENST00000600190 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
FARP1-229ENST00000600190 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
FARP1-229ENST00000600190 A0A0D9SG42 100 aa7.67□□□□□ -1.18
FARP1-229ENST00000600190 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
FARP1-229ENST00000600190 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
FARP1-229ENST00000600190 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
FARP1-229ENST00000600190 PCP4P48539 62 aa7.6□□□□□ -1.19
FARP1-229ENST00000600190 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
FARP1-229ENST00000600190 V9GYY9 64 aa7.56□□□□□ -1.2
FARP1-229ENST00000600190 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
FARP1-229ENST00000600190 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
FARP1-229ENST00000600190 UQCR11O14957 56 aa7.5□□□□□ -1.21
FARP1-229ENST00000600190 KRTAP10-12P60413 245 aa7.49□□□□□ -1.21
FARP1-229ENST00000600190 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
FARP1-229ENST00000600190 A8MU10 97 aa7.43□□□□□ -1.22
FARP1-229ENST00000600190 Q1T7F1 81 aa7.41□□□□□ -1.22
FARP1-229ENST00000600190 RPS28P62857 69 aaKnown RBP7.36□□□□□ -1.23
FARP1-229ENST00000600190 PSPHP1O15172 72 aa7.35□□□□□ -1.23
FARP1-229ENST00000600190 MIR22HGQ0VDD5 57 aa7.33□□□□□ -1.24
FARP1-229ENST00000600190 GPR98Q8WXG9 6306 aa7.31□□□□□ -1.24
FARP1-229ENST00000600190 DSTQ03001 7570 aaKnown RBP7.3□□□□□ -1.24
FARP1-229ENST00000600190 K7ERS5 55 aa7.27□□□□□ -1.25
FARP1-229ENST00000600190 A6NED7 52 aa7.19□□□□□ -1.26
FARP1-229ENST00000600190 TNP1P09430 55 aa7.14□□□□□ -1.27
FARP1-229ENST00000600190 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
FARP1-229ENST00000600190 LCE5AQ5TCM9 118 aa7.1□□□□□ -1.27
FARP1-229ENST00000600190 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms