RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
IRF3-223ENST00000599223 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
IRF3-223ENST00000599223 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
IRF3-223ENST00000599223 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
IRF3-223ENST00000599223 TMEM258P61165 79 aa7.16□□□□□ -1.26
IRF3-223ENST00000599223 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
IRF3-223ENST00000599223 Q5W150 140 aa7.14□□□□□ -1.27
IRF3-223ENST00000599223 H7BZZ5 65 aa7.12□□□□□ -1.27
IRF3-223ENST00000599223 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
IRF3-223ENST00000599223 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
IRF3-223ENST00000599223 SPINK7P58062 85 aa7.09□□□□□ -1.27
IRF3-223ENST00000599223 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
IRF3-223ENST00000599223 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
IRF3-223ENST00000599223 IGKV2D-30A0A075B6S6 120 aa7.07□□□□□ -1.28
IRF3-223ENST00000599223 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
IRF3-223ENST00000599223 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
IRF3-223ENST00000599223 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
IRF3-223ENST00000599223 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
IRF3-223ENST00000599223 ACYP2P14621 99 aa6.89□□□□□ -1.31
IRF3-223ENST00000599223 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
IRF3-223ENST00000599223 A8MUN3 132 aa6.87□□□□□ -1.31
IRF3-223ENST00000599223 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
IRF3-223ENST00000599223 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
IRF3-223ENST00000599223 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
IRF3-223ENST00000599223 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
IRF3-223ENST00000599223 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
IRF3-223ENST00000599223 COA5Q86WW8 74 aa6.81□□□□□ -1.32
IRF3-223ENST00000599223 NEBP20929 6669 aa6.81□□□□□ -1.32
IRF3-223ENST00000599223 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
IRF3-223ENST00000599223 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
IRF3-223ENST00000599223 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
IRF3-223ENST00000599223 MT1BP07438 61 aa6.69□□□□□ -1.34
IRF3-223ENST00000599223 V9GYY9 64 aa6.68□□□□□ -1.34
IRF3-223ENST00000599223 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
IRF3-223ENST00000599223 A6NN06 94 aa6.63□□□□□ -1.35
IRF3-223ENST00000599223 S4R3F8 94 aa6.62□□□□□ -1.35
IRF3-223ENST00000599223 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
IRF3-223ENST00000599223 Q1T7F1 81 aa6.59□□□□□ -1.35
IRF3-223ENST00000599223 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
IRF3-223ENST00000599223 Q5VV11 94 aa6.58□□□□□ -1.36
IRF3-223ENST00000599223 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
IRF3-223ENST00000599223 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
IRF3-223ENST00000599223 SEC61GP60059 68 aa6.54□□□□□ -1.36
IRF3-223ENST00000599223 LCA10Q71F78 164 aa6.54□□□□□ -1.36
IRF3-223ENST00000599223 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
IRF3-223ENST00000599223 A0A1B0GU69 56 aa6.5□□□□□ -1.37
IRF3-223ENST00000599223 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
IRF3-223ENST00000599223 KMT2DO14686 5537 aa6.5□□□□□ -1.37
IRF3-223ENST00000599223 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
IRF3-223ENST00000599223 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
IRF3-223ENST00000599223 MDN1Q9NU22 5596 aa6.49□□□□□ -1.37
IRF3-223ENST00000599223 PSPHP1O15172 72 aa6.47□□□□□ -1.37
IRF3-223ENST00000599223 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
IRF3-223ENST00000599223 A6NED7 52 aa6.34□□□□□ -1.39
IRF3-223ENST00000599223 H0YAA0 97 aa6.31□□□□□ -1.4
IRF3-223ENST00000599223 UQCR11O14957 56 aa6.3□□□□□ -1.4
IRF3-223ENST00000599223 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
IRF3-223ENST00000599223 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
IRF3-223ENST00000599223 A0A1B0GU33 70 aa6.28□□□□□ -1.4
IRF3-223ENST00000599223 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
IRF3-223ENST00000599223 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
IRF3-223ENST00000599223 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
IRF3-223ENST00000599223 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
IRF3-223ENST00000599223 MT1XP80297 61 aa6.21□□□□□ -1.42
IRF3-223ENST00000599223 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
IRF3-223ENST00000599223 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
IRF3-223ENST00000599223 SPRR2EP22531 72 aa6.2□□□□□ -1.42
IRF3-223ENST00000599223 SPRR2BP35325 72 aa6.2□□□□□ -1.42
IRF3-223ENST00000599223 SPRR2AP35326 72 aa6.2□□□□□ -1.42
IRF3-223ENST00000599223 P0C880 135 aa6.18□□□□□ -1.42
IRF3-223ENST00000599223 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
IRF3-223ENST00000599223 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
IRF3-223ENST00000599223 M0QZ58 72 aa6.15□□□□□ -1.42
IRF3-223ENST00000599223 R4GN34 69 aa6.12□□□□□ -1.43
IRF3-223ENST00000599223 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
IRF3-223ENST00000599223 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
IRF3-223ENST00000599223 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
IRF3-223ENST00000599223 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
IRF3-223ENST00000599223 K7ERS5 55 aa6.06□□□□□ -1.44
IRF3-223ENST00000599223 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
IRF3-223ENST00000599223 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
IRF3-223ENST00000599223 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
IRF3-223ENST00000599223 A0A0D9SG42 100 aa6.02□□□□□ -1.45
IRF3-223ENST00000599223 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
IRF3-223ENST00000599223 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
IRF3-223ENST00000599223 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
IRF3-223ENST00000599223 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
IRF3-223ENST00000599223 A8MU10 97 aa6□□□□□ -1.45
IRF3-223ENST00000599223 SPRR2DP22532 72 aa5.99□□□□□ -1.45
IRF3-223ENST00000599223 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
IRF3-223ENST00000599223 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
IRF3-223ENST00000599223 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
IRF3-223ENST00000599223 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
IRF3-223ENST00000599223 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
IRF3-223ENST00000599223 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
IRF3-223ENST00000599223 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
IRF3-223ENST00000599223 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
IRF3-223ENST00000599223 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
IRF3-223ENST00000599223 ROMO1P60602 79 aa5.69□□□□□ -1.5
IRF3-223ENST00000599223 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms