RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
TRIM28-212ENST00000597995 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
TRIM28-212ENST00000597995 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
TRIM28-212ENST00000597995 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
TRIM28-212ENST00000597995 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
TRIM28-212ENST00000597995 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
TRIM28-212ENST00000597995 A0A087WVE0 104 aa5.58□□□□□ -1.52
TRIM28-212ENST00000597995 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
TRIM28-212ENST00000597995 J3QR89 54 aa5.58□□□□□ -1.52
TRIM28-212ENST00000597995 UQCRQO14949 82 aa5.57□□□□□ -1.52
TRIM28-212ENST00000597995 H0Y9P7 68 aa5.56□□□□□ -1.52
TRIM28-212ENST00000597995 ATOX1O00244 68 aa5.56□□□□□ -1.52
TRIM28-212ENST00000597995 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
TRIM28-212ENST00000597995 KMT2DO14686 5537 aa5.51□□□□□ -1.53
TRIM28-212ENST00000597995 MP68P56378 58 aa5.5□□□□□ -1.53
TRIM28-212ENST00000597995 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
TRIM28-212ENST00000597995 LINC00208Q96KT6 92 aa5.48□□□□□ -1.53
TRIM28-212ENST00000597995 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
TRIM28-212ENST00000597995 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
TRIM28-212ENST00000597995 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
TRIM28-212ENST00000597995 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
TRIM28-212ENST00000597995 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
TRIM28-212ENST00000597995 NDUFC1O43677 76 aa5.42□□□□□ -1.54
TRIM28-212ENST00000597995 A8MUN3 132 aa5.41□□□□□ -1.54
TRIM28-212ENST00000597995 H0YAA0 97 aa5.4□□□□□ -1.54
TRIM28-212ENST00000597995 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
TRIM28-212ENST00000597995 H3BPC8 53 aa5.36□□□□□ -1.55
TRIM28-212ENST00000597995 K7ERU9 68 aa5.36□□□□□ -1.55
TRIM28-212ENST00000597995 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
TRIM28-212ENST00000597995 SPRR2EP22531 72 aa5.33□□□□□ -1.56
TRIM28-212ENST00000597995 SPRR2BP35325 72 aa5.33□□□□□ -1.56
TRIM28-212ENST00000597995 SPRR2AP35326 72 aa5.33□□□□□ -1.56
TRIM28-212ENST00000597995 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
TRIM28-212ENST00000597995 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
TRIM28-212ENST00000597995 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
TRIM28-212ENST00000597995 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
TRIM28-212ENST00000597995 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
TRIM28-212ENST00000597995 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
TRIM28-212ENST00000597995 MT1XP80297 61 aa5.25□□□□□ -1.57
TRIM28-212ENST00000597995 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
TRIM28-212ENST00000597995 TRAV7A0A075B6U4 112 aa5.24□□□□□ -1.57
TRIM28-212ENST00000597995 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
TRIM28-212ENST00000597995 P0C880 135 aa5.23□□□□□ -1.57
TRIM28-212ENST00000597995 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
TRIM28-212ENST00000597995 C20orf197Q8N268 126 aa5.22□□□□□ -1.57
TRIM28-212ENST00000597995 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
TRIM28-212ENST00000597995 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
TRIM28-212ENST00000597995 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
TRIM28-212ENST00000597995 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
TRIM28-212ENST00000597995 ACYP2P14621 99 aa5.18□□□□□ -1.58
TRIM28-212ENST00000597995 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
TRIM28-212ENST00000597995 R4GN34 69 aa5.17□□□□□ -1.58
TRIM28-212ENST00000597995 SPRR2DP22532 72 aa5.16□□□□□ -1.58
TRIM28-212ENST00000597995 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
TRIM28-212ENST00000597995 M0QZ58 72 aa5.13□□□□□ -1.59
TRIM28-212ENST00000597995 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
TRIM28-212ENST00000597995 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
TRIM28-212ENST00000597995 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
TRIM28-212ENST00000597995 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
TRIM28-212ENST00000597995 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
TRIM28-212ENST00000597995 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
TRIM28-212ENST00000597995 KRTAP10-12P60413 245 aa5□□□□□ -1.61
TRIM28-212ENST00000597995 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
TRIM28-212ENST00000597995 COX7CP15954 63 aa4.94□□□□□ -1.62
TRIM28-212ENST00000597995 COA5Q86WW8 74 aa4.92□□□□□ -1.62
TRIM28-212ENST00000597995 SEC61GP60059 68 aa4.91□□□□□ -1.62
TRIM28-212ENST00000597995 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
TRIM28-212ENST00000597995 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
TRIM28-212ENST00000597995 ANAPC13Q9BS18 74 aa4.87□□□□□ -1.63
TRIM28-212ENST00000597995 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.64
TRIM28-212ENST00000597995 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
TRIM28-212ENST00000597995 H7BZZ5 65 aa4.82□□□□□ -1.64
TRIM28-212ENST00000597995 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
TRIM28-212ENST00000597995 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
TRIM28-212ENST00000597995 A0A0D9SG42 100 aa4.77□□□□□ -1.65
TRIM28-212ENST00000597995 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
TRIM28-212ENST00000597995 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
TRIM28-212ENST00000597995 A0A1B0GU33 70 aa4.73□□□□□ -1.65
TRIM28-212ENST00000597995 A0A1B0GU69 56 aa4.73□□□□□ -1.65
TRIM28-212ENST00000597995 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
TRIM28-212ENST00000597995 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
TRIM28-212ENST00000597995 SPINT4Q6UDR6 99 aa4.71□□□□□ -1.66
TRIM28-212ENST00000597995 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
TRIM28-212ENST00000597995 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
TRIM28-212ENST00000597995 MT1EP04732 61 aa4.67□□□□□ -1.66
TRIM28-212ENST00000597995 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
TRIM28-212ENST00000597995 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
TRIM28-212ENST00000597995 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
TRIM28-212ENST00000597995 PCP4P48539 62 aa4.62□□□□□ -1.67
TRIM28-212ENST00000597995 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
TRIM28-212ENST00000597995 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
TRIM28-212ENST00000597995 MT1GP13640 62 aa4.58□□□□□ -1.68
TRIM28-212ENST00000597995 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
TRIM28-212ENST00000597995 TMEM258P61165 79 aa4.56□□□□□ -1.68
TRIM28-212ENST00000597995 A8MU10 97 aa4.54□□□□□ -1.68
TRIM28-212ENST00000597995 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
TRIM28-212ENST00000597995 MT4P47944 62 aa4.52□□□□□ -1.69
TRIM28-212ENST00000597995 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
TRIM28-212ENST00000597995 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
TRIM28-212ENST00000597995 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms