RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 FAM236DA0A1B0GTK5 79 aa7.75□□□□□ -1.17
FOXA3-202ENST00000594297 FAM236CP0DP71 79 aa7.75□□□□□ -1.17
FOXA3-202ENST00000594297 HRES1P13985 223 aa7.74□□□□□ -1.17
FOXA3-202ENST00000594297 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
FOXA3-202ENST00000594297 MT1FP04733 61 aa7.73□□□□□ -1.17
FOXA3-202ENST00000594297 NDUFC1O43677 76 aa7.72□□□□□ -1.17
FOXA3-202ENST00000594297 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
FOXA3-202ENST00000594297 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
FOXA3-202ENST00000594297 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
FOXA3-202ENST00000594297 MPLKIPQ8TAP9 179 aa7.67□□□□□ -1.18
FOXA3-202ENST00000594297 A8MUN3 132 aa7.63□□□□□ -1.19
FOXA3-202ENST00000594297 CCDC179H3BU77 68 aa7.63□□□□□ -1.19
FOXA3-202ENST00000594297 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
FOXA3-202ENST00000594297 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
FOXA3-202ENST00000594297 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
FOXA3-202ENST00000594297 SPANXA2-OT1Q8N9U9 137 aa7.6□□□□□ -1.19
FOXA3-202ENST00000594297 PCP4P48539 62 aa7.56□□□□□ -1.2
FOXA3-202ENST00000594297 KRTAP6-3Q3LI67 103 aa7.56□□□□□ -1.2
FOXA3-202ENST00000594297 H7BZZ5 65 aa7.54□□□□□ -1.2
FOXA3-202ENST00000594297 ACYP2P14621 99 aa7.53□□□□□ -1.2
FOXA3-202ENST00000594297 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
FOXA3-202ENST00000594297 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
FOXA3-202ENST00000594297 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
FOXA3-202ENST00000594297 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
FOXA3-202ENST00000594297 S4R3F8 94 aa7.48□□□□□ -1.21
FOXA3-202ENST00000594297 TMEM258P61165 79 aa7.46□□□□□ -1.22
FOXA3-202ENST00000594297 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
FOXA3-202ENST00000594297 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
FOXA3-202ENST00000594297 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
FOXA3-202ENST00000594297 LCA10Q71F78 164 aa7.38□□□□□ -1.23
FOXA3-202ENST00000594297 NEBP20929 6669 aa7.38□□□□□ -1.23
FOXA3-202ENST00000594297 COA5Q86WW8 74 aa7.33□□□□□ -1.24
FOXA3-202ENST00000594297 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
FOXA3-202ENST00000594297 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
FOXA3-202ENST00000594297 SERP1Q9Y6X1 66 aa7.23□□□□□ -1.25
FOXA3-202ENST00000594297 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
FOXA3-202ENST00000594297 H0YAA0 97 aa7.14□□□□□ -1.27
FOXA3-202ENST00000594297 SEC61GP60059 68 aa7.14□□□□□ -1.27
FOXA3-202ENST00000594297 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
FOXA3-202ENST00000594297 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
FOXA3-202ENST00000594297 A6NN06 94 aa7.04□□□□□ -1.28
FOXA3-202ENST00000594297 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
FOXA3-202ENST00000594297 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
FOXA3-202ENST00000594297 A0A1B0GU69 56 aa7.02□□□□□ -1.29
FOXA3-202ENST00000594297 V9GYY9 64 aa7.02□□□□□ -1.29
FOXA3-202ENST00000594297 KRTAP5-9P26371 169 aa7.01□□□□□ -1.29
FOXA3-202ENST00000594297 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
FOXA3-202ENST00000594297 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
FOXA3-202ENST00000594297 MT1BP07438 61 aa6.95□□□□□ -1.3
FOXA3-202ENST00000594297 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
FOXA3-202ENST00000594297 P0C880 135 aa6.93□□□□□ -1.3
FOXA3-202ENST00000594297 KMT2DO14686 5537 aa6.92□□□□□ -1.3
FOXA3-202ENST00000594297 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
FOXA3-202ENST00000594297 R4GN34 69 aa6.92□□□□□ -1.3
FOXA3-202ENST00000594297 Q1T7F1 81 aa6.91□□□□□ -1.3
FOXA3-202ENST00000594297 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
FOXA3-202ENST00000594297 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
FOXA3-202ENST00000594297 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
FOXA3-202ENST00000594297 A0A1B0GU33 70 aa6.87□□□□□ -1.31
FOXA3-202ENST00000594297 M0QZ58 72 aa6.87□□□□□ -1.31
FOXA3-202ENST00000594297 Q5VV11 94 aa6.87□□□□□ -1.31
FOXA3-202ENST00000594297 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
FOXA3-202ENST00000594297 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
FOXA3-202ENST00000594297 PSPHP1O15172 72 aa6.79□□□□□ -1.32
FOXA3-202ENST00000594297 UQCR11O14957 56 aa6.76□□□□□ -1.33
FOXA3-202ENST00000594297 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
FOXA3-202ENST00000594297 SPRR2EP22531 72 aa6.71□□□□□ -1.34
FOXA3-202ENST00000594297 SPRR2BP35325 72 aa6.71□□□□□ -1.34
FOXA3-202ENST00000594297 SPRR2AP35326 72 aa6.71□□□□□ -1.34
FOXA3-202ENST00000594297 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
FOXA3-202ENST00000594297 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
FOXA3-202ENST00000594297 A6NED7 52 aa6.65□□□□□ -1.34
FOXA3-202ENST00000594297 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
FOXA3-202ENST00000594297 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
FOXA3-202ENST00000594297 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
FOXA3-202ENST00000594297 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
FOXA3-202ENST00000594297 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
FOXA3-202ENST00000594297 A0A0D9SG42 100 aa6.62□□□□□ -1.35
FOXA3-202ENST00000594297 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
FOXA3-202ENST00000594297 A8MU10 97 aa6.53□□□□□ -1.36
FOXA3-202ENST00000594297 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
FOXA3-202ENST00000594297 K7ERS5 55 aa6.52□□□□□ -1.37
FOXA3-202ENST00000594297 SPRR2DP22532 72 aa6.5□□□□□ -1.37
FOXA3-202ENST00000594297 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
FOXA3-202ENST00000594297 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
FOXA3-202ENST00000594297 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
FOXA3-202ENST00000594297 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
FOXA3-202ENST00000594297 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
FOXA3-202ENST00000594297 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
FOXA3-202ENST00000594297 MT1XP80297 61 aa6.38□□□□□ -1.39
FOXA3-202ENST00000594297 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
FOXA3-202ENST00000594297 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
FOXA3-202ENST00000594297 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
FOXA3-202ENST00000594297 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
FOXA3-202ENST00000594297 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
FOXA3-202ENST00000594297 TNP1P09430 55 aa6.1□□□□□ -1.43
FOXA3-202ENST00000594297 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
FOXA3-202ENST00000594297 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
FOXA3-202ENST00000594297 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
FOXA3-202ENST00000594297 ROMO1P60602 79 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms