RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SPRR2EP22531 72 aa6.95□□□□□ -1.3
LIG1-205ENST00000593425 SPRR2BP35325 72 aa6.95□□□□□ -1.3
LIG1-205ENST00000593425 SPRR2AP35326 72 aa6.95□□□□□ -1.3
LIG1-205ENST00000593425 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
LIG1-205ENST00000593425 K7EP34 96 aa6.89□□□□□ -1.31
LIG1-205ENST00000593425 MT1XP80297 61 aa6.89□□□□□ -1.31
LIG1-205ENST00000593425 H0YAA0 97 aa6.88□□□□□ -1.31
LIG1-205ENST00000593425 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
LIG1-205ENST00000593425 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
LIG1-205ENST00000593425 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
LIG1-205ENST00000593425 A8MUN3 132 aa6.84□□□□□ -1.31
LIG1-205ENST00000593425 NDUFC1O43677 76 aa6.84□□□□□ -1.31
LIG1-205ENST00000593425 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
LIG1-205ENST00000593425 LCE1AQ5T7P2 110 aa6.82□□□□□ -1.32
LIG1-205ENST00000593425 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
LIG1-205ENST00000593425 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
LIG1-205ENST00000593425 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
LIG1-205ENST00000593425 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
LIG1-205ENST00000593425 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
LIG1-205ENST00000593425 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
LIG1-205ENST00000593425 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
LIG1-205ENST00000593425 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
LIG1-205ENST00000593425 H0Y9P7 68 aa6.72□□□□□ -1.33
LIG1-205ENST00000593425 SPRR2DP22532 72 aa6.72□□□□□ -1.33
LIG1-205ENST00000593425 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
LIG1-205ENST00000593425 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
LIG1-205ENST00000593425 ACYP1P07311 99 aa6.71□□□□□ -1.34
LIG1-205ENST00000593425 UQCRQO14949 82 aa6.69□□□□□ -1.34
LIG1-205ENST00000593425 ATOX1O00244 68 aa6.68□□□□□ -1.34
LIG1-205ENST00000593425 F8W1H4 67 aa6.66□□□□□ -1.34
LIG1-205ENST00000593425 R4GN34 69 aa6.66□□□□□ -1.34
LIG1-205ENST00000593425 P0C880 135 aa6.65□□□□□ -1.34
LIG1-205ENST00000593425 GTF2H5Q6ZYL4 71 aa6.65□□□□□ -1.34
LIG1-205ENST00000593425 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
LIG1-205ENST00000593425 M0QZ58 72 aa6.61□□□□□ -1.35
LIG1-205ENST00000593425 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
LIG1-205ENST00000593425 ATP5EP2Q5VTU8 51 aa6.58□□□□□ -1.36
LIG1-205ENST00000593425 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
LIG1-205ENST00000593425 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
LIG1-205ENST00000593425 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
LIG1-205ENST00000593425 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
LIG1-205ENST00000593425 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
LIG1-205ENST00000593425 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
LIG1-205ENST00000593425 FAM240AA0A1B0GVK7 77 aa6.5□□□□□ -1.37
LIG1-205ENST00000593425 MP68P56378 58 aa6.46□□□□□ -1.38
LIG1-205ENST00000593425 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
LIG1-205ENST00000593425 DMAC1Q96GE9 116 aa6.43□□□□□ -1.38
LIG1-205ENST00000593425 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
LIG1-205ENST00000593425 PCP4L1A6NKN8 68 aa6.35□□□□□ -1.39
LIG1-205ENST00000593425 H3BPC8 53 aa6.32□□□□□ -1.4
LIG1-205ENST00000593425 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
LIG1-205ENST00000593425 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
LIG1-205ENST00000593425 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
LIG1-205ENST00000593425 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
LIG1-205ENST00000593425 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
LIG1-205ENST00000593425 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
LIG1-205ENST00000593425 ACYP2P14621 99 aa6.17□□□□□ -1.42
LIG1-205ENST00000593425 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
LIG1-205ENST00000593425 SCGB1A1P11684 91 aa6.14□□□□□ -1.43
LIG1-205ENST00000593425 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
LIG1-205ENST00000593425 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
LIG1-205ENST00000593425 MT1EP04732 61 aa6.12□□□□□ -1.43
LIG1-205ENST00000593425 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
LIG1-205ENST00000593425 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
LIG1-205ENST00000593425 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
LIG1-205ENST00000593425 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
LIG1-205ENST00000593425 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
LIG1-205ENST00000593425 A0A1B0GV90 55 aa5.99□□□□□ -1.45
LIG1-205ENST00000593425 J3QR89 54 aa5.95□□□□□ -1.46
LIG1-205ENST00000593425 MT1GP13640 62 aa5.93□□□□□ -1.46
LIG1-205ENST00000593425 MT4P47944 62 aa5.92□□□□□ -1.46
LIG1-205ENST00000593425 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
LIG1-205ENST00000593425 A0A0D9SG42 100 aa5.91□□□□□ -1.46
LIG1-205ENST00000593425 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
LIG1-205ENST00000593425 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
LIG1-205ENST00000593425 HMCN1Q96RW7 5635 aa5.89□□□□□ -1.47
LIG1-205ENST00000593425 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
LIG1-205ENST00000593425 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
LIG1-205ENST00000593425 MT1MQ8N339 61 aa5.86□□□□□ -1.47
LIG1-205ENST00000593425 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
LIG1-205ENST00000593425 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
LIG1-205ENST00000593425 MT1LQ93083 61 aa5.8□□□□□ -1.48
LIG1-205ENST00000593425 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
LIG1-205ENST00000593425 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
LIG1-205ENST00000593425 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
LIG1-205ENST00000593425 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
LIG1-205ENST00000593425 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
LIG1-205ENST00000593425 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
LIG1-205ENST00000593425 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
LIG1-205ENST00000593425 COA5Q86WW8 74 aa5.71□□□□□ -1.5
LIG1-205ENST00000593425 SERP1Q9Y6X1 66 aa5.69□□□□□ -1.5
LIG1-205ENST00000593425 SEC61GP60059 68 aa5.68□□□□□ -1.5
LIG1-205ENST00000593425 A0A1B0GU33 70 aa5.65□□□□□ -1.5
LIG1-205ENST00000593425 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
LIG1-205ENST00000593425 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
LIG1-205ENST00000593425 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
LIG1-205ENST00000593425 K7ERU9 68 aa5.57□□□□□ -1.52
LIG1-205ENST00000593425 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
LIG1-205ENST00000593425 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
LIG1-205ENST00000593425 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms