RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 A0A0D9SG42 100 aa9.23□□□□□ -0.93
SPC24-206ENST00000592540 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SPC24-206ENST00000592540 FAT3Q8TDW7 4589 aa9.22□□□□□ -0.93
SPC24-206ENST00000592540 P0C880 135 aa9.21□□□□□ -0.94
SPC24-206ENST00000592540 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
SPC24-206ENST00000592540 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
SPC24-206ENST00000592540 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
SPC24-206ENST00000592540 HSPG2P98160 4391 aa9.16□□□□□ -0.94
SPC24-206ENST00000592540 S4R3F8 94 aa9.14□□□□□ -0.95
SPC24-206ENST00000592540 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
SPC24-206ENST00000592540 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
SPC24-206ENST00000592540 TNXBP22105 4242 aa9.11□□□□□ -0.95
SPC24-206ENST00000592540 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
SPC24-206ENST00000592540 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
SPC24-206ENST00000592540 XP32Q5T750 250 aa9.03□□□□□ -0.96
SPC24-206ENST00000592540 KRTAP12-2P59991 146 aa9□□□□□ -0.97
SPC24-206ENST00000592540 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
SPC24-206ENST00000592540 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
SPC24-206ENST00000592540 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.98
SPC24-206ENST00000592540 RYR2Q92736 4967 aa8.89□□□□□ -0.99
SPC24-206ENST00000592540 Q5VSD8 79 aa8.79□□□□□ -1
SPC24-206ENST00000592540 NDUFAF8A1L188 74 aa8.78□□□□□ -1
SPC24-206ENST00000592540 M0QZ58 72 aa8.78□□□□□ -1
SPC24-206ENST00000592540 LPAP08519 4548 aa8.76□□□□□ -1.01
SPC24-206ENST00000592540 KMT2CQ8NEZ4 4911 aaKnown RBP8.76□□□□□ -1.01
SPC24-206ENST00000592540 LRP2P98164 4655 aa8.64□□□□□ -1.03
SPC24-206ENST00000592540 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
SPC24-206ENST00000592540 RYR1P21817 5038 aa8.62□□□□□ -1.03
SPC24-206ENST00000592540 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
SPC24-206ENST00000592540 R4GN34 69 aa8.5□□□□□ -1.05
SPC24-206ENST00000592540 RYR3Q15413 4870 aa8.42□□□□□ -1.06
SPC24-206ENST00000592540 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
SPC24-206ENST00000592540 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
SPC24-206ENST00000592540 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
SPC24-206ENST00000592540 MUC17Q685J3 4493 aa8.31□□□□□ -1.08
SPC24-206ENST00000592540 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
SPC24-206ENST00000592540 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SPC24-206ENST00000592540 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
SPC24-206ENST00000592540 KRTAP4-1Q9BYQ7 146 aa8.14□□□□□ -1.11
SPC24-206ENST00000592540 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
SPC24-206ENST00000592540 EPPK1P58107 5090 aaKnown RBP8.06□□□□□ -1.12
SPC24-206ENST00000592540 KRTAP19-2Q3LHN2 52 aa8.04□□□□□ -1.12
SPC24-206ENST00000592540 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
SPC24-206ENST00000592540 KRTAP4-5Q9BYR2 181 aa8.02□□□□□ -1.13
SPC24-206ENST00000592540 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
SPC24-206ENST00000592540 TNP1P09430 55 aa7.85□□□□□ -1.15
SPC24-206ENST00000592540 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
SPC24-206ENST00000592540 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
SPC24-206ENST00000592540 J3QL48 77 aa7.78□□□□□ -1.16
SPC24-206ENST00000592540 HERC1Q15751 4861 aa7.77□□□□□ -1.17
SPC24-206ENST00000592540 MUC2Q02817 5179 aa7.75□□□□□ -1.17
SPC24-206ENST00000592540 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
SPC24-206ENST00000592540 HERC2O95714 4834 aa7.67□□□□□ -1.18
SPC24-206ENST00000592540 BIRC6Q9NR09 4857 aa7.64□□□□□ -1.19
SPC24-206ENST00000592540 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
SPC24-206ENST00000592540 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
SPC24-206ENST00000592540 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
SPC24-206ENST00000592540 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
SPC24-206ENST00000592540 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
SPC24-206ENST00000592540 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
SPC24-206ENST00000592540 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
SPC24-206ENST00000592540 M0R2T5 61 aa7.25□□□□□ -1.25
SPC24-206ENST00000592540 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
SPC24-206ENST00000592540 MT1FP04733 61 aa7.18□□□□□ -1.26
SPC24-206ENST00000592540 MT1HP80294 61 aa7.18□□□□□ -1.26
SPC24-206ENST00000592540 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
SPC24-206ENST00000592540 MT2AP02795 61 aa7.16□□□□□ -1.26
SPC24-206ENST00000592540 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
SPC24-206ENST00000592540 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
SPC24-206ENST00000592540 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
SPC24-206ENST00000592540 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
SPC24-206ENST00000592540 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
SPC24-206ENST00000592540 INE1O15225 51 aa7.04□□□□□ -1.28
SPC24-206ENST00000592540 MT1XP80297 61 aa7.04□□□□□ -1.28
SPC24-206ENST00000592540 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
SPC24-206ENST00000592540 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
SPC24-206ENST00000592540 MT1BP07438 61 aa7.01□□□□□ -1.29
SPC24-206ENST00000592540 KRTAP10-12P60413 245 aa7□□□□□ -1.29
SPC24-206ENST00000592540 KRTAP10-7P60409 375 aaPredicted RBP6.88□□□□□ -1.31
SPC24-206ENST00000592540 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
SPC24-206ENST00000592540 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
SPC24-206ENST00000592540 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.35
SPC24-206ENST00000592540 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.35
SPC24-206ENST00000592540 KMT2DO14686 5537 aa6.46□□□□□ -1.38
SPC24-206ENST00000592540 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
SPC24-206ENST00000592540 LCE2BO14633 110 aa6.45□□□□□ -1.38
SPC24-206ENST00000592540 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SPC24-206ENST00000592540 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
SPC24-206ENST00000592540 USH2AO75445 5202 aa6.35□□□□□ -1.39
SPC24-206ENST00000592540 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
SPC24-206ENST00000592540 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
SPC24-206ENST00000592540 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
SPC24-206ENST00000592540 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SPC24-206ENST00000592540 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
SPC24-206ENST00000592540 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
SPC24-206ENST00000592540 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
SPC24-206ENST00000592540 MT1LQ93083 61 aa6.11□□□□□ -1.43
SPC24-206ENST00000592540 MT1EP04732 61 aa6.07□□□□□ -1.44
SPC24-206ENST00000592540 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
SPC24-206ENST00000592540 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms