RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PRO0461Q9UI25 63 aa8.44□□□□□ -1.06
CCDC43-205ENST00000592333 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
CCDC43-205ENST00000592333 NEBP20929 6669 aa8.4□□□□□ -1.06
CCDC43-205ENST00000592333 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
CCDC43-205ENST00000592333 COL5A1-AS1Q5SY13 56 aa8.39□□□□□ -1.07
CCDC43-205ENST00000592333 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
CCDC43-205ENST00000592333 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
CCDC43-205ENST00000592333 K7EP34 96 aa8.37□□□□□ -1.07
CCDC43-205ENST00000592333 KRTAP4-2Q9BYR5 136 aa8.37□□□□□ -1.07
CCDC43-205ENST00000592333 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
CCDC43-205ENST00000592333 KRTAP4-11Q9BYQ6 195 aa8.3□□□□□ -1.08
CCDC43-205ENST00000592333 MUC12Q9UKN1 5478 aa8.29□□□□□ -1.08
CCDC43-205ENST00000592333 F8W1H4 67 aa8.28□□□□□ -1.08
CCDC43-205ENST00000592333 KRTAP5-9P26371 169 aa8.28□□□□□ -1.08
CCDC43-205ENST00000592333 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
CCDC43-205ENST00000592333 GTF2H5Q6ZYL4 71 aa8.27□□□□□ -1.09
CCDC43-205ENST00000592333 TRAV22A0A0B4J277 110 aa8.26□□□□□ -1.09
CCDC43-205ENST00000592333 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
CCDC43-205ENST00000592333 LCE5AQ5TCM9 118 aa8.23□□□□□ -1.09
CCDC43-205ENST00000592333 H0YAA0 97 aa8.22□□□□□ -1.09
CCDC43-205ENST00000592333 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
CCDC43-205ENST00000592333 A0A087WVE0 104 aa8.17□□□□□ -1.1
CCDC43-205ENST00000592333 NDUFC1O43677 76 aa8.17□□□□□ -1.1
CCDC43-205ENST00000592333 KRTAP20-1Q3LI63 56 aa8.17□□□□□ -1.1
CCDC43-205ENST00000592333 ATOX1O00244 68 aa8.15□□□□□ -1.1
CCDC43-205ENST00000592333 ACYP1P07311 99 aa8.15□□□□□ -1.1
CCDC43-205ENST00000592333 UQCRQO14949 82 aa8.13□□□□□ -1.11
CCDC43-205ENST00000592333 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
CCDC43-205ENST00000592333 KMT2DO14686 5537 aa8.11□□□□□ -1.11
CCDC43-205ENST00000592333 A8MUN3 132 aa8.11□□□□□ -1.11
CCDC43-205ENST00000592333 FAM240AA0A1B0GVK7 77 aa8.07□□□□□ -1.12
CCDC43-205ENST00000592333 H0Y9P7 68 aa8.05□□□□□ -1.12
CCDC43-205ENST00000592333 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
CCDC43-205ENST00000592333 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
CCDC43-205ENST00000592333 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
CCDC43-205ENST00000592333 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
CCDC43-205ENST00000592333 KRTAP2-3P0C7H8 128 aa7.94□□□□□ -1.14
CCDC43-205ENST00000592333 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
CCDC43-205ENST00000592333 KRTAP2-4Q9BYR9 128 aa7.94□□□□□ -1.14
CCDC43-205ENST00000592333 MT1XP80297 61 aa7.92□□□□□ -1.14
CCDC43-205ENST00000592333 LINC00208Q96KT6 92 aa7.91□□□□□ -1.14
CCDC43-205ENST00000592333 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
CCDC43-205ENST00000592333 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
CCDC43-205ENST00000592333 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
CCDC43-205ENST00000592333 MP68P56378 58 aa7.88□□□□□ -1.15
CCDC43-205ENST00000592333 R4GN34 69 aa7.87□□□□□ -1.15
CCDC43-205ENST00000592333 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
CCDC43-205ENST00000592333 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
CCDC43-205ENST00000592333 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
CCDC43-205ENST00000592333 SPRR2EP22531 72 aa7.83□□□□□ -1.16
CCDC43-205ENST00000592333 SPRR2BP35325 72 aa7.83□□□□□ -1.16
CCDC43-205ENST00000592333 SPRR2AP35326 72 aa7.83□□□□□ -1.16
CCDC43-205ENST00000592333 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
CCDC43-205ENST00000592333 H3BPC8 53 aa7.8□□□□□ -1.16
CCDC43-205ENST00000592333 P0C880 135 aa7.77□□□□□ -1.17
CCDC43-205ENST00000592333 M0QZ58 72 aa7.75□□□□□ -1.17
CCDC43-205ENST00000592333 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
CCDC43-205ENST00000592333 LCE1AQ5T7P2 110 aa7.73□□□□□ -1.17
CCDC43-205ENST00000592333 KRTAP2-2Q9BYT5 123 aa7.68□□□□□ -1.18
CCDC43-205ENST00000592333 KRTAP2-1Q9BYU5 128 aa7.68□□□□□ -1.18
CCDC43-205ENST00000592333 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
CCDC43-205ENST00000592333 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
CCDC43-205ENST00000592333 SPRR2DP22532 72 aa7.58□□□□□ -1.2
CCDC43-205ENST00000592333 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
CCDC43-205ENST00000592333 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
CCDC43-205ENST00000592333 J3QR89 54 aa7.54□□□□□ -1.2
CCDC43-205ENST00000592333 ACYP2P14621 99 aa7.54□□□□□ -1.2
CCDC43-205ENST00000592333 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
CCDC43-205ENST00000592333 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.21
CCDC43-205ENST00000592333 MT-ATP8P03928 68 aa7.47□□□□□ -1.21
CCDC43-205ENST00000592333 A0A1B0GV90 55 aa7.42□□□□□ -1.22
CCDC43-205ENST00000592333 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.22
CCDC43-205ENST00000592333 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
CCDC43-205ENST00000592333 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.23
CCDC43-205ENST00000592333 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
CCDC43-205ENST00000592333 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
CCDC43-205ENST00000592333 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
CCDC43-205ENST00000592333 SNURFQ9Y675 71 aa7.12□□□□□ -1.27
CCDC43-205ENST00000592333 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
CCDC43-205ENST00000592333 K7ERU9 68 aa7.11□□□□□ -1.27
CCDC43-205ENST00000592333 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
CCDC43-205ENST00000592333 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
CCDC43-205ENST00000592333 MT1EP04732 61 aa7.04□□□□□ -1.28
CCDC43-205ENST00000592333 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
CCDC43-205ENST00000592333 SEC61GP60059 68 aa6.98□□□□□ -1.29
CCDC43-205ENST00000592333 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CCDC43-205ENST00000592333 SERP1Q9Y6X1 66 aa6.96□□□□□ -1.3
CCDC43-205ENST00000592333 GPR98Q8WXG9 6306 aa6.94□□□□□ -1.3
CCDC43-205ENST00000592333 COA5Q86WW8 74 aa6.93□□□□□ -1.3
CCDC43-205ENST00000592333 MT1GP13640 62 aa6.91□□□□□ -1.3
CCDC43-205ENST00000592333 A0A0D9SG42 100 aa6.9□□□□□ -1.3
CCDC43-205ENST00000592333 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
CCDC43-205ENST00000592333 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
CCDC43-205ENST00000592333 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
CCDC43-205ENST00000592333 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CCDC43-205ENST00000592333 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
CCDC43-205ENST00000592333 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
CCDC43-205ENST00000592333 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
CCDC43-205ENST00000592333 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
CCDC43-205ENST00000592333 MT1MQ8N339 61 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms