RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
DDX39A-211ENST00000590239 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
DDX39A-211ENST00000590239 ACYP2P14621 99 aa7.45□□□□□ -1.22
DDX39A-211ENST00000590239 MT1HP80294 61 aa7.44□□□□□ -1.22
DDX39A-211ENST00000590239 S4R3F8 94 aa7.43□□□□□ -1.22
DDX39A-211ENST00000590239 ATP5EP56381 51 aaPredicted RBP7.41□□□□□ -1.22
DDX39A-211ENST00000590239 TMEM258P61165 79 aa7.41□□□□□ -1.22
DDX39A-211ENST00000590239 LCA10Q71F78 164 aa7.38□□□□□ -1.23
DDX39A-211ENST00000590239 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
DDX39A-211ENST00000590239 M0R2T5 61 aa7.35□□□□□ -1.23
DDX39A-211ENST00000590239 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
DDX39A-211ENST00000590239 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
DDX39A-211ENST00000590239 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
DDX39A-211ENST00000590239 COA5Q86WW8 74 aa7.31□□□□□ -1.24
DDX39A-211ENST00000590239 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
DDX39A-211ENST00000590239 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
DDX39A-211ENST00000590239 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
DDX39A-211ENST00000590239 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
DDX39A-211ENST00000590239 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
DDX39A-211ENST00000590239 H0YAA0 97 aa7.14□□□□□ -1.27
DDX39A-211ENST00000590239 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
DDX39A-211ENST00000590239 MT2AP02795 61 aa7.09□□□□□ -1.27
DDX39A-211ENST00000590239 RPS28P62857 69 aaKnown RBP7.07□□□□□ -1.28
DDX39A-211ENST00000590239 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
DDX39A-211ENST00000590239 MT1FP04733 61 aa7.03□□□□□ -1.28
DDX39A-211ENST00000590239 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
DDX39A-211ENST00000590239 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
DDX39A-211ENST00000590239 SEC61GP60059 68 aa6.98□□□□□ -1.29
DDX39A-211ENST00000590239 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
DDX39A-211ENST00000590239 P0C880 135 aa6.96□□□□□ -1.3
DDX39A-211ENST00000590239 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
DDX39A-211ENST00000590239 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
DDX39A-211ENST00000590239 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
DDX39A-211ENST00000590239 A0A1B0GU69 56 aa6.93□□□□□ -1.3
DDX39A-211ENST00000590239 V9GYY9 64 aa6.91□□□□□ -1.3
DDX39A-211ENST00000590239 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
DDX39A-211ENST00000590239 Q1T7F1 81 aa6.89□□□□□ -1.31
DDX39A-211ENST00000590239 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
DDX39A-211ENST00000590239 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
DDX39A-211ENST00000590239 USH2AO75445 5202 aa6.89□□□□□ -1.31
DDX39A-211ENST00000590239 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.31
DDX39A-211ENST00000590239 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
DDX39A-211ENST00000590239 R4GN34 69 aa6.83□□□□□ -1.32
DDX39A-211ENST00000590239 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
DDX39A-211ENST00000590239 A0A1B0GU33 70 aa6.81□□□□□ -1.32
DDX39A-211ENST00000590239 M0QZ58 72 aa6.81□□□□□ -1.32
DDX39A-211ENST00000590239 PSPHP1O15172 72 aa6.74□□□□□ -1.33
DDX39A-211ENST00000590239 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
DDX39A-211ENST00000590239 LCE2BO14633 110 aa6.73□□□□□ -1.33
DDX39A-211ENST00000590239 Q5VV11 94 aa6.73□□□□□ -1.33
DDX39A-211ENST00000590239 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
DDX39A-211ENST00000590239 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
DDX39A-211ENST00000590239 UQCR11O14957 56 aa6.67□□□□□ -1.34
DDX39A-211ENST00000590239 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
DDX39A-211ENST00000590239 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
DDX39A-211ENST00000590239 MT1BP07438 61 aa6.61□□□□□ -1.35
DDX39A-211ENST00000590239 A6NN06 94 aa6.6□□□□□ -1.35
DDX39A-211ENST00000590239 NEBP20929 6669 aa6.57□□□□□ -1.36
DDX39A-211ENST00000590239 A0A0D9SG42 100 aa6.57□□□□□ -1.36
DDX39A-211ENST00000590239 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
DDX39A-211ENST00000590239 A6NED7 52 aa6.56□□□□□ -1.36
DDX39A-211ENST00000590239 A8MU10 97 aa6.54□□□□□ -1.36
DDX39A-211ENST00000590239 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
DDX39A-211ENST00000590239 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
DDX39A-211ENST00000590239 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
DDX39A-211ENST00000590239 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
DDX39A-211ENST00000590239 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
DDX39A-211ENST00000590239 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
DDX39A-211ENST00000590239 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
DDX39A-211ENST00000590239 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
DDX39A-211ENST00000590239 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
DDX39A-211ENST00000590239 K7ERS5 55 aa6.35□□□□□ -1.39
DDX39A-211ENST00000590239 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
DDX39A-211ENST00000590239 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
DDX39A-211ENST00000590239 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
DDX39A-211ENST00000590239 MT1XP80297 61 aa6.33□□□□□ -1.4
DDX39A-211ENST00000590239 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
DDX39A-211ENST00000590239 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
DDX39A-211ENST00000590239 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
DDX39A-211ENST00000590239 KMT2DO14686 5537 aa6.11□□□□□ -1.43
DDX39A-211ENST00000590239 TNP1P09430 55 aa6.03□□□□□ -1.44
DDX39A-211ENST00000590239 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
DDX39A-211ENST00000590239 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
DDX39A-211ENST00000590239 ROMO1P60602 79 aa6.02□□□□□ -1.45
DDX39A-211ENST00000590239 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
DDX39A-211ENST00000590239 GPR98Q8WXG9 6306 aa5.99□□□□□ -1.45
DDX39A-211ENST00000590239 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
DDX39A-211ENST00000590239 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
DDX39A-211ENST00000590239 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
DDX39A-211ENST00000590239 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
DDX39A-211ENST00000590239 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
DDX39A-211ENST00000590239 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
DDX39A-211ENST00000590239 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
DDX39A-211ENST00000590239 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
DDX39A-211ENST00000590239 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
DDX39A-211ENST00000590239 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
DDX39A-211ENST00000590239 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
DDX39A-211ENST00000590239 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
DDX39A-211ENST00000590239 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
DDX39A-211ENST00000590239 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms