RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SPATA45Q537H7 98 aa5.21□□□□□ -1.58
NEDD4L-227ENST00000590020 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
NEDD4L-227ENST00000590020 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
NEDD4L-227ENST00000590020 LOC110117498A0A087WWA1 95 aa5.17□□□□□ -1.58
NEDD4L-227ENST00000590020 SCGB1C2P0DMR2 95 aa5.17□□□□□ -1.58
NEDD4L-227ENST00000590020 A0A087WVE0 104 aa5.16□□□□□ -1.58
NEDD4L-227ENST00000590020 A0A1B0GW54 56 aa5.16□□□□□ -1.58
NEDD4L-227ENST00000590020 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
NEDD4L-227ENST00000590020 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
NEDD4L-227ENST00000590020 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
NEDD4L-227ENST00000590020 VAMP8Q9BV40 100 aa5.15□□□□□ -1.59
NEDD4L-227ENST00000590020 A8MUN3 132 aa5.13□□□□□ -1.59
NEDD4L-227ENST00000590020 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
NEDD4L-227ENST00000590020 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
NEDD4L-227ENST00000590020 Q8N9L7 120 aa5.13□□□□□ -1.59
NEDD4L-227ENST00000590020 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
NEDD4L-227ENST00000590020 CXCL6P80162 114 aa5.11□□□□□ -1.59
NEDD4L-227ENST00000590020 HSD52Q0P140 79 aa5.09□□□□□ -1.59
NEDD4L-227ENST00000590020 PDE6GP18545 87 aa5.08□□□□□ -1.6
NEDD4L-227ENST00000590020 BPY2O14599 106 aa5.07□□□□□ -1.6
NEDD4L-227ENST00000590020 PYY3Q5JQD4 70 aa5.06□□□□□ -1.6
NEDD4L-227ENST00000590020 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
NEDD4L-227ENST00000590020 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
NEDD4L-227ENST00000590020 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
NEDD4L-227ENST00000590020 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
NEDD4L-227ENST00000590020 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
NEDD4L-227ENST00000590020 H0YAA0 97 aa5.01□□□□□ -1.61
NEDD4L-227ENST00000590020 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
NEDD4L-227ENST00000590020 UQCR10Q9UDW1 63 aa5□□□□□ -1.61
NEDD4L-227ENST00000590020 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
NEDD4L-227ENST00000590020 MT4P47944 62 aa4.97□□□□□ -1.61
NEDD4L-227ENST00000590020 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
NEDD4L-227ENST00000590020 SMIM6P0DI80 62 aa4.95□□□□□ -1.62
NEDD4L-227ENST00000590020 NDUFC1O43677 76 aa4.94□□□□□ -1.62
NEDD4L-227ENST00000590020 K7EP34 96 aa4.93□□□□□ -1.62
NEDD4L-227ENST00000590020 R4GN34 69 aa4.93□□□□□ -1.62
NEDD4L-227ENST00000590020 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
NEDD4L-227ENST00000590020 LOC105371267A0A1B0GV96 52 aa4.89□□□□□ -1.63
NEDD4L-227ENST00000590020 M0QZ58 72 aa4.89□□□□□ -1.63
NEDD4L-227ENST00000590020 CYP4F30PQ9H0H9 118 aa4.89□□□□□ -1.63
NEDD4L-227ENST00000590020 M0R143 59 aa4.87□□□□□ -1.63
NEDD4L-227ENST00000590020 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
NEDD4L-227ENST00000590020 P0C880 135 aa4.86□□□□□ -1.63
NEDD4L-227ENST00000590020 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
NEDD4L-227ENST00000590020 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
NEDD4L-227ENST00000590020 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
NEDD4L-227ENST00000590020 BATFQ16520 125 aa4.8□□□□□ -1.64
NEDD4L-227ENST00000590020 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
NEDD4L-227ENST00000590020 CYSTM1Q9H1C7 97 aa4.78□□□□□ -1.64
NEDD4L-227ENST00000590020 MT1EP04732 61 aa4.77□□□□□ -1.65
NEDD4L-227ENST00000590020 H3BT86 120 aa4.76□□□□□ -1.65
NEDD4L-227ENST00000590020 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
NEDD4L-227ENST00000590020 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
NEDD4L-227ENST00000590020 ACYP1P07311 99 aa4.73□□□□□ -1.65
NEDD4L-227ENST00000590020 TRAV22A0A0B4J277 110 aa4.72□□□□□ -1.65
NEDD4L-227ENST00000590020 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
NEDD4L-227ENST00000590020 C20orf197Q8N268 126 aa4.72□□□□□ -1.65
NEDD4L-227ENST00000590020 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
NEDD4L-227ENST00000590020 UBL5Q9BZL1 73 aa4.7□□□□□ -1.66
NEDD4L-227ENST00000590020 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
NEDD4L-227ENST00000590020 TAX1BP3O14907 124 aa4.69□□□□□ -1.66
NEDD4L-227ENST00000590020 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
NEDD4L-227ENST00000590020 PCP4L1A6NKN8 68 aa4.66□□□□□ -1.66
NEDD4L-227ENST00000590020 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
NEDD4L-227ENST00000590020 COL5A1-AS1Q5SY13 56 aa4.65□□□□□ -1.67
NEDD4L-227ENST00000590020 MT1GP13640 62 aa4.62□□□□□ -1.67
NEDD4L-227ENST00000590020 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
NEDD4L-227ENST00000590020 MT1MQ8N339 61 aa4.59□□□□□ -1.67
NEDD4L-227ENST00000590020 H0Y9P7 68 aa4.58□□□□□ -1.68
NEDD4L-227ENST00000590020 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
NEDD4L-227ENST00000590020 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
NEDD4L-227ENST00000590020 PRO0461Q9UI25 63 aa4.56□□□□□ -1.68
NEDD4L-227ENST00000590020 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
NEDD4L-227ENST00000590020 GTF2H5Q6ZYL4 71 aa4.54□□□□□ -1.68
NEDD4L-227ENST00000590020 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
NEDD4L-227ENST00000590020 ATOX1O00244 68 aa4.51□□□□□ -1.69
NEDD4L-227ENST00000590020 UQCRQO14949 82 aa4.49□□□□□ -1.69
NEDD4L-227ENST00000590020 F8W1H4 67 aa4.47□□□□□ -1.69
NEDD4L-227ENST00000590020 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
NEDD4L-227ENST00000590020 ETDBQ3ZM63 59 aa4.46□□□□□ -1.7
NEDD4L-227ENST00000590020 MT1LQ93083 61 aa4.46□□□□□ -1.7
NEDD4L-227ENST00000590020 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
NEDD4L-227ENST00000590020 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
NEDD4L-227ENST00000590020 A0A0D9SG42 100 aa4.42□□□□□ -1.7
NEDD4L-227ENST00000590020 A0A1B0GV90 55 aa4.4□□□□□ -1.71
NEDD4L-227ENST00000590020 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
NEDD4L-227ENST00000590020 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
NEDD4L-227ENST00000590020 FAM240AA0A1B0GVK7 77 aa4.34□□□□□ -1.71
NEDD4L-227ENST00000590020 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
NEDD4L-227ENST00000590020 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
NEDD4L-227ENST00000590020 MP68P56378 58 aa4.29□□□□□ -1.72
NEDD4L-227ENST00000590020 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
NEDD4L-227ENST00000590020 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.73
NEDD4L-227ENST00000590020 J3QR89 54 aa4.25□□□□□ -1.73
NEDD4L-227ENST00000590020 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
NEDD4L-227ENST00000590020 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
NEDD4L-227ENST00000590020 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
NEDD4L-227ENST00000590020 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
NEDD4L-227ENST00000590020 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
NEDD4L-227ENST00000590020 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms