RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
DNMT1-219ENST00000589349 Q8N9L7 120 aa4.03□□□□□ -1.76
DNMT1-219ENST00000589349 CXCL6P80162 114 aa4.02□□□□□ -1.77
DNMT1-219ENST00000589349 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
DNMT1-219ENST00000589349 MT2AP02795 61 aa4.01□□□□□ -1.77
DNMT1-219ENST00000589349 COL5A1-AS1Q5SY13 56 aa4.01□□□□□ -1.77
DNMT1-219ENST00000589349 UBL5Q9BZL1 73 aa4.01□□□□□ -1.77
DNMT1-219ENST00000589349 HCG22E2RYF7 251 aa4□□□□□ -1.77
DNMT1-219ENST00000589349 MT1FP04733 61 aa3.98□□□□□ -1.77
DNMT1-219ENST00000589349 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
DNMT1-219ENST00000589349 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
DNMT1-219ENST00000589349 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
DNMT1-219ENST00000589349 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
DNMT1-219ENST00000589349 A0A1B0GV90 55 aa3.95□□□□□ -1.78
DNMT1-219ENST00000589349 K7EP34 96 aa3.95□□□□□ -1.78
DNMT1-219ENST00000589349 Q5W150 140 aa3.95□□□□□ -1.78
DNMT1-219ENST00000589349 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
DNMT1-219ENST00000589349 C4orf26Q17RF5 130 aa3.94□□□□□ -1.78
DNMT1-219ENST00000589349 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
DNMT1-219ENST00000589349 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
DNMT1-219ENST00000589349 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
DNMT1-219ENST00000589349 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
DNMT1-219ENST00000589349 FAM236AA0A1B0GUQ0 79 aa3.89□□□□□ -1.79
DNMT1-219ENST00000589349 FAM236BA0A1B0GV22 79 aa3.89□□□□□ -1.79
DNMT1-219ENST00000589349 F8W1H4 67 aa3.89□□□□□ -1.79
DNMT1-219ENST00000589349 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
DNMT1-219ENST00000589349 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
DNMT1-219ENST00000589349 TP53AIP1Q9HCN2 124 aa3.87□□□□□ -1.79
DNMT1-219ENST00000589349 S4R3F8 94 aa3.86□□□□□ -1.79
DNMT1-219ENST00000589349 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
DNMT1-219ENST00000589349 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
DNMT1-219ENST00000589349 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
DNMT1-219ENST00000589349 NEBP20929 6669 aa3.82□□□□□ -1.8
DNMT1-219ENST00000589349 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
DNMT1-219ENST00000589349 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
DNMT1-219ENST00000589349 ACYP1P07311 99 aa3.8□□□□□ -1.8
DNMT1-219ENST00000589349 LCA10Q71F78 164 aa3.79□□□□□ -1.8
DNMT1-219ENST00000589349 USH2AO75445 5202 aa3.79□□□□□ -1.8
DNMT1-219ENST00000589349 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
DNMT1-219ENST00000589349 CYP4F30PQ9H0H9 118 aa3.78□□□□□ -1.8
DNMT1-219ENST00000589349 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
DNMT1-219ENST00000589349 LOC101927531A0A1B0GV80 90 aa3.76□□□□□ -1.81
DNMT1-219ENST00000589349 H0Y9P7 68 aa3.76□□□□□ -1.81
DNMT1-219ENST00000589349 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
DNMT1-219ENST00000589349 ATP5EP2Q5VTU8 51 aa3.76□□□□□ -1.81
DNMT1-219ENST00000589349 UQCRQO14949 82 aa3.75□□□□□ -1.81
DNMT1-219ENST00000589349 ATOX1O00244 68 aa3.73□□□□□ -1.81
DNMT1-219ENST00000589349 Q5VV11 94 aa3.73□□□□□ -1.81
DNMT1-219ENST00000589349 A0A087WVE0 104 aa3.72□□□□□ -1.81
DNMT1-219ENST00000589349 FAM240AA0A1B0GVK7 77 aa3.72□□□□□ -1.81
DNMT1-219ENST00000589349 NDUFC1O43677 76 aa3.72□□□□□ -1.81
DNMT1-219ENST00000589349 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
DNMT1-219ENST00000589349 LINC00643Q86TS7 51 aa3.71□□□□□ -1.82
DNMT1-219ENST00000589349 IMUPQ9GZP8 106 aa3.71□□□□□ -1.82
DNMT1-219ENST00000589349 A6NN06 94 aa3.7□□□□□ -1.82
DNMT1-219ENST00000589349 KLKP1Q107X0 134 aa3.7□□□□□ -1.82
DNMT1-219ENST00000589349 LINC00208Q96KT6 92 aa3.7□□□□□ -1.82
DNMT1-219ENST00000589349 K7ERU9 68 aa3.69□□□□□ -1.82
DNMT1-219ENST00000589349 MP68P56378 58 aa3.69□□□□□ -1.82
DNMT1-219ENST00000589349 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
DNMT1-219ENST00000589349 J3QR89 54 aa3.66□□□□□ -1.82
DNMT1-219ENST00000589349 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
DNMT1-219ENST00000589349 A8MUN3 132 aa3.64□□□□□ -1.83
DNMT1-219ENST00000589349 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
DNMT1-219ENST00000589349 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
DNMT1-219ENST00000589349 CRIPTQ9P021 101 aa3.63□□□□□ -1.83
DNMT1-219ENST00000589349 MT1BP07438 61 aa3.62□□□□□ -1.83
DNMT1-219ENST00000589349 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
DNMT1-219ENST00000589349 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
DNMT1-219ENST00000589349 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
DNMT1-219ENST00000589349 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
DNMT1-219ENST00000589349 H3BPC8 53 aa3.56□□□□□ -1.84
DNMT1-219ENST00000589349 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
DNMT1-219ENST00000589349 R4GN34 69 aa3.56□□□□□ -1.84
DNMT1-219ENST00000589349 H0YAA0 97 aa3.55□□□□□ -1.84
DNMT1-219ENST00000589349 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
DNMT1-219ENST00000589349 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
DNMT1-219ENST00000589349 KMT2DO14686 5537 aa3.54□□□□□ -1.84
DNMT1-219ENST00000589349 M0QZ58 72 aa3.53□□□□□ -1.84
DNMT1-219ENST00000589349 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
DNMT1-219ENST00000589349 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
DNMT1-219ENST00000589349 CHKB-CPT1BH3BT56 60 aa3.51□□□□□ -1.85
DNMT1-219ENST00000589349 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
DNMT1-219ENST00000589349 P0C880 135 aa3.5□□□□□ -1.85
DNMT1-219ENST00000589349 ACYP2P14621 99 aa3.5□□□□□ -1.85
DNMT1-219ENST00000589349 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
DNMT1-219ENST00000589349 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
DNMT1-219ENST00000589349 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
DNMT1-219ENST00000589349 SMIM20Q8N5G0 67 aa3.48□□□□□ -1.85
DNMT1-219ENST00000589349 TRAV7A0A075B6U4 112 aa3.46□□□□□ -1.86
DNMT1-219ENST00000589349 SNURFQ9Y675 71 aa3.45□□□□□ -1.86
DNMT1-219ENST00000589349 ANAPC13Q9BS18 74 aa3.44□□□□□ -1.86
DNMT1-219ENST00000589349 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
DNMT1-219ENST00000589349 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
DNMT1-219ENST00000589349 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
DNMT1-219ENST00000589349 SEC61GP60059 68 aa3.4□□□□□ -1.87
DNMT1-219ENST00000589349 MT1XP80297 61 aa3.4□□□□□ -1.87
DNMT1-219ENST00000589349 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
DNMT1-219ENST00000589349 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
DNMT1-219ENST00000589349 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms