RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
CIRBP-222ENST00000589235 SYNE2Q8WXH0 6885 aaKnown RBP9.83□□□□□ -0.84
CIRBP-222ENST00000589235 S4R3F8 94 aa9.82□□□□□ -0.84
CIRBP-222ENST00000589235 C1orf64Q8NEQ6 169 aa9.81□□□□□ -0.84
CIRBP-222ENST00000589235 KLKP1Q107X0 134 aa9.8□□□□□ -0.84
CIRBP-222ENST00000589235 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
CIRBP-222ENST00000589235 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
CIRBP-222ENST00000589235 NDUFC1O43677 76 aa9.76□□□□□ -0.85
CIRBP-222ENST00000589235 TMEM258P61165 79 aa9.76□□□□□ -0.85
CIRBP-222ENST00000589235 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
CIRBP-222ENST00000589235 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
CIRBP-222ENST00000589235 LCA10Q71F78 164 aa9.7□□□□□ -0.86
CIRBP-222ENST00000589235 H7BZZ5 65 aa9.67□□□□□ -0.86
CIRBP-222ENST00000589235 SNURFQ9Y675 71 aa9.66□□□□□ -0.86
CIRBP-222ENST00000589235 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
CIRBP-222ENST00000589235 H3BPC8 53 aa9.63□□□□□ -0.87
CIRBP-222ENST00000589235 Q5VV11 94 aa9.63□□□□□ -0.87
CIRBP-222ENST00000589235 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
CIRBP-222ENST00000589235 MP68P56378 58 aa9.61□□□□□ -0.87
CIRBP-222ENST00000589235 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-222ENST00000589235 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
CIRBP-222ENST00000589235 A6NN06 94 aa9.59□□□□□ -0.87
CIRBP-222ENST00000589235 SPRR2GQ9BYE4 73 aa9.59□□□□□ -0.87
CIRBP-222ENST00000589235 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
CIRBP-222ENST00000589235 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
CIRBP-222ENST00000589235 KRTAP19-8Q3LI54 63 aa9.54□□□□□ -0.88
CIRBP-222ENST00000589235 MT1BP07438 61 aa9.53□□□□□ -0.88
CIRBP-222ENST00000589235 H0Y9P7 68 aa9.52□□□□□ -0.89
CIRBP-222ENST00000589235 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
CIRBP-222ENST00000589235 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
CIRBP-222ENST00000589235 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
CIRBP-222ENST00000589235 SERP1Q9Y6X1 66 aa9.47□□□□□ -0.89
CIRBP-222ENST00000589235 SPANXA2-OT1Q8N9U9 137 aa9.4□□□□□ -0.9
CIRBP-222ENST00000589235 KRTAP10-5P60370 271 aa9.39□□□□□ -0.91
CIRBP-222ENST00000589235 A8MUN3 132 aa9.32□□□□□ -0.92
CIRBP-222ENST00000589235 H0YAA0 97 aa9.32□□□□□ -0.92
CIRBP-222ENST00000589235 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
CIRBP-222ENST00000589235 NEBP20929 6669 aa9.23□□□□□ -0.93
CIRBP-222ENST00000589235 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
CIRBP-222ENST00000589235 KRTAP5-9P26371 169 aa9.12□□□□□ -0.95
CIRBP-222ENST00000589235 PRO2289Q9P1D8 64 aa9.11□□□□□ -0.95
CIRBP-222ENST00000589235 MUC12Q9UKN1 5478 aa9.11□□□□□ -0.95
CIRBP-222ENST00000589235 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
CIRBP-222ENST00000589235 COA5Q86WW8 74 aa9.04□□□□□ -0.96
CIRBP-222ENST00000589235 R4GN34 69 aa9.03□□□□□ -0.96
CIRBP-222ENST00000589235 V9GYY9 64 aa9.03□□□□□ -0.96
CIRBP-222ENST00000589235 ACYP2P14621 99 aa9.02□□□□□ -0.97
CIRBP-222ENST00000589235 Q1T7F1 81 aa9.02□□□□□ -0.97
CIRBP-222ENST00000589235 KRTAP20-1Q3LI63 56 aa9.01□□□□□ -0.97
CIRBP-222ENST00000589235 DMAC1Q96GE9 116 aa9□□□□□ -0.97
CIRBP-222ENST00000589235 M0QZ58 72 aa8.92□□□□□ -0.98
CIRBP-222ENST00000589235 KMT2DO14686 5537 aa8.91□□□□□ -0.98
CIRBP-222ENST00000589235 P0C880 135 aa8.9□□□□□ -0.98
CIRBP-222ENST00000589235 MT1XP80297 61 aa8.9□□□□□ -0.98
CIRBP-222ENST00000589235 SPRR2FQ96RM1 72 aa8.84□□□□□ -0.99
CIRBP-222ENST00000589235 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
CIRBP-222ENST00000589235 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
CIRBP-222ENST00000589235 MDN1Q9NU22 5596 aa8.82□□□□□ -1
CIRBP-222ENST00000589235 LINC01554Q52M75 96 aa8.79□□□□□ -1
CIRBP-222ENST00000589235 KRTAP8-1Q8IUC2 63 aa8.79□□□□□ -1
CIRBP-222ENST00000589235 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
CIRBP-222ENST00000589235 KRTAP12-2P59991 146 aa8.78□□□□□ -1
CIRBP-222ENST00000589235 KRTAP2-3P0C7H8 128 aa8.76□□□□□ -1.01
CIRBP-222ENST00000589235 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
CIRBP-222ENST00000589235 KRTAP2-4Q9BYR9 128 aa8.76□□□□□ -1.01
CIRBP-222ENST00000589235 SPRR2EP22531 72 aa8.75□□□□□ -1.01
CIRBP-222ENST00000589235 SPRR2BP35325 72 aa8.75□□□□□ -1.01
CIRBP-222ENST00000589235 SPRR2AP35326 72 aa8.75□□□□□ -1.01
CIRBP-222ENST00000589235 PSPHP1O15172 72 aa8.73□□□□□ -1.01
CIRBP-222ENST00000589235 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
CIRBP-222ENST00000589235 PRO0628Q9UI54 55 aa8.61□□□□□ -1.03
CIRBP-222ENST00000589235 BRK1Q8WUW1 75 aa8.59□□□□□ -1.03
CIRBP-222ENST00000589235 LCE1AQ5T7P2 110 aa8.58□□□□□ -1.04
CIRBP-222ENST00000589235 A0A1B0GU69 56 aa8.56□□□□□ -1.04
CIRBP-222ENST00000589235 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
CIRBP-222ENST00000589235 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
CIRBP-222ENST00000589235 SVIPQ8NHG7 77 aa8.52□□□□□ -1.05
CIRBP-222ENST00000589235 A6NED7 52 aa8.51□□□□□ -1.05
CIRBP-222ENST00000589235 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
CIRBP-222ENST00000589235 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
CIRBP-222ENST00000589235 SEC61GP60059 68 aa8.48□□□□□ -1.05
CIRBP-222ENST00000589235 KRTAP2-2Q9BYT5 123 aa8.48□□□□□ -1.05
CIRBP-222ENST00000589235 KRTAP2-1Q9BYU5 128 aa8.48□□□□□ -1.05
CIRBP-222ENST00000589235 SPRR2DP22532 72 aa8.47□□□□□ -1.05
CIRBP-222ENST00000589235 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.06
CIRBP-222ENST00000589235 UQCR11O14957 56 aa8.38□□□□□ -1.07
CIRBP-222ENST00000589235 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
CIRBP-222ENST00000589235 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
CIRBP-222ENST00000589235 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
CIRBP-222ENST00000589235 A8MU10 97 aa8.28□□□□□ -1.08
CIRBP-222ENST00000589235 LCE3BQ5TA77 95 aa8.25□□□□□ -1.09
CIRBP-222ENST00000589235 A0A1B0GU33 70 aa8.23□□□□□ -1.09
CIRBP-222ENST00000589235 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
CIRBP-222ENST00000589235 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
CIRBP-222ENST00000589235 A0A0D9SG42 100 aa8.05□□□□□ -1.12
CIRBP-222ENST00000589235 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
CIRBP-222ENST00000589235 KRTAP19-7Q3SYF9 63 aa7.96□□□□□ -1.14
CIRBP-222ENST00000589235 LCE5AQ5TCM9 118 aa7.93□□□□□ -1.14
CIRBP-222ENST00000589235 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
CIRBP-222ENST00000589235 K7ERS5 55 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms