RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
DNMT1-217ENST00000589091 F8W1H4 67 aa6.62□□□□□ -1.35
DNMT1-217ENST00000589091 Q5VV11 94 aa6.61□□□□□ -1.35
DNMT1-217ENST00000589091 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
DNMT1-217ENST00000589091 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
DNMT1-217ENST00000589091 A6NN06 94 aa6.58□□□□□ -1.36
DNMT1-217ENST00000589091 MT1BP07438 61 aa6.58□□□□□ -1.36
DNMT1-217ENST00000589091 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
DNMT1-217ENST00000589091 ETDBQ3ZM63 59 aa6.58□□□□□ -1.36
DNMT1-217ENST00000589091 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
DNMT1-217ENST00000589091 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
DNMT1-217ENST00000589091 CYP4F30PQ9H0H9 118 aa6.57□□□□□ -1.36
DNMT1-217ENST00000589091 TRAV22A0A0B4J277 110 aa6.55□□□□□ -1.36
DNMT1-217ENST00000589091 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
DNMT1-217ENST00000589091 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
DNMT1-217ENST00000589091 ACYP1P07311 99 aa6.51□□□□□ -1.37
DNMT1-217ENST00000589091 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
DNMT1-217ENST00000589091 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
DNMT1-217ENST00000589091 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
DNMT1-217ENST00000589091 IMUPQ9GZP8 106 aa6.46□□□□□ -1.38
DNMT1-217ENST00000589091 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
DNMT1-217ENST00000589091 ATOX1O00244 68 aa6.45□□□□□ -1.38
DNMT1-217ENST00000589091 UQCRQO14949 82 aa6.45□□□□□ -1.38
DNMT1-217ENST00000589091 A0A087WVE0 104 aa6.43□□□□□ -1.38
DNMT1-217ENST00000589091 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
DNMT1-217ENST00000589091 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
DNMT1-217ENST00000589091 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
DNMT1-217ENST00000589091 H0Y9P7 68 aa6.42□□□□□ -1.38
DNMT1-217ENST00000589091 NDUFC1O43677 76 aa6.42□□□□□ -1.38
DNMT1-217ENST00000589091 H0YAA0 97 aa6.4□□□□□ -1.38
DNMT1-217ENST00000589091 A8MUN3 132 aa6.38□□□□□ -1.39
DNMT1-217ENST00000589091 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
DNMT1-217ENST00000589091 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
DNMT1-217ENST00000589091 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
DNMT1-217ENST00000589091 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
DNMT1-217ENST00000589091 LINC00208Q96KT6 92 aa6.3□□□□□ -1.4
DNMT1-217ENST00000589091 MP68P56378 58 aa6.28□□□□□ -1.4
DNMT1-217ENST00000589091 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
DNMT1-217ENST00000589091 NEBP20929 6669 aa6.26□□□□□ -1.41
DNMT1-217ENST00000589091 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
DNMT1-217ENST00000589091 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
DNMT1-217ENST00000589091 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
DNMT1-217ENST00000589091 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
DNMT1-217ENST00000589091 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
DNMT1-217ENST00000589091 H3BPC8 53 aa6.19□□□□□ -1.42
DNMT1-217ENST00000589091 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
DNMT1-217ENST00000589091 R4GN34 69 aa6.17□□□□□ -1.42
DNMT1-217ENST00000589091 MT1XP80297 61 aa6.14□□□□□ -1.43
DNMT1-217ENST00000589091 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
DNMT1-217ENST00000589091 P0C880 135 aa6.11□□□□□ -1.43
DNMT1-217ENST00000589091 J3QR89 54 aa6.1□□□□□ -1.43
DNMT1-217ENST00000589091 M0QZ58 72 aa6.1□□□□□ -1.43
DNMT1-217ENST00000589091 KMT2DO14686 5537 aa6.09□□□□□ -1.43
DNMT1-217ENST00000589091 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
DNMT1-217ENST00000589091 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
DNMT1-217ENST00000589091 A0A1B0GV90 55 aa6.07□□□□□ -1.44
DNMT1-217ENST00000589091 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
DNMT1-217ENST00000589091 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
DNMT1-217ENST00000589091 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
DNMT1-217ENST00000589091 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
DNMT1-217ENST00000589091 SPRR2EP22531 72 aa6.03□□□□□ -1.44
DNMT1-217ENST00000589091 SPRR2BP35325 72 aa6.03□□□□□ -1.44
DNMT1-217ENST00000589091 SPRR2AP35326 72 aa6.03□□□□□ -1.44
DNMT1-217ENST00000589091 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
DNMT1-217ENST00000589091 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
DNMT1-217ENST00000589091 LINC01554Q52M75 96 aa6□□□□□ -1.45
DNMT1-217ENST00000589091 ACYP2P14621 99 aa5.98□□□□□ -1.45
DNMT1-217ENST00000589091 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
DNMT1-217ENST00000589091 SMIM20Q8N5G0 67 aa5.93□□□□□ -1.46
DNMT1-217ENST00000589091 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
DNMT1-217ENST00000589091 MT-ATP8P03928 68 aa5.9□□□□□ -1.46
DNMT1-217ENST00000589091 SEC61GP60059 68 aa5.87□□□□□ -1.47
DNMT1-217ENST00000589091 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
DNMT1-217ENST00000589091 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
DNMT1-217ENST00000589091 SPRR2DP22532 72 aa5.84□□□□□ -1.47
DNMT1-217ENST00000589091 KRTAP10-7P60409 375 aaPredicted RBP5.84□□□□□ -1.47
DNMT1-217ENST00000589091 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
DNMT1-217ENST00000589091 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
DNMT1-217ENST00000589091 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
DNMT1-217ENST00000589091 K7ERU9 68 aa5.79□□□□□ -1.48
DNMT1-217ENST00000589091 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
DNMT1-217ENST00000589091 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
DNMT1-217ENST00000589091 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
DNMT1-217ENST00000589091 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
DNMT1-217ENST00000589091 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
DNMT1-217ENST00000589091 COA5Q86WW8 74 aa5.56□□□□□ -1.52
DNMT1-217ENST00000589091 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
DNMT1-217ENST00000589091 A0A0D9SG42 100 aa5.48□□□□□ -1.53
DNMT1-217ENST00000589091 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
DNMT1-217ENST00000589091 MT1EP04732 61 aa5.46□□□□□ -1.54
DNMT1-217ENST00000589091 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
DNMT1-217ENST00000589091 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
DNMT1-217ENST00000589091 A0A1B0GU33 70 aa5.44□□□□□ -1.54
DNMT1-217ENST00000589091 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
DNMT1-217ENST00000589091 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
DNMT1-217ENST00000589091 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
DNMT1-217ENST00000589091 COX7CP15954 63 aa5.42□□□□□ -1.54
DNMT1-217ENST00000589091 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
DNMT1-217ENST00000589091 H7BZZ5 65 aa5.36□□□□□ -1.55
DNMT1-217ENST00000589091 MT1GP13640 62 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms