RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 RPL38P63173 70 aaKnown RBP-0.82□□□□□ -2.54
SMAD4-207ENST00000589076 S100A8P05109 93 aa-0.83□□□□□ -2.54
SMAD4-207ENST00000589076 MT1GP13640 62 aa-0.83□□□□□ -2.54
SMAD4-207ENST00000589076 COX6B2Q6YFQ2 88 aa-0.83□□□□□ -2.54
SMAD4-207ENST00000589076 MT1MQ8N339 61 aa-0.83□□□□□ -2.54
SMAD4-207ENST00000589076 ABCA9Q8IUA7 1624 aa-0.84□□□□□ -2.54
SMAD4-207ENST00000589076 PEA15Q15121 130 aa-0.84□□□□□ -2.54
SMAD4-207ENST00000589076 PLGLAQ15195 96 aa-0.84□□□□□ -2.54
SMAD4-207ENST00000589076 A0A1B0GUT8 65 aa-0.85□□□□□ -2.55
SMAD4-207ENST00000589076 UACAQ9BZF9 1416 aa-0.85□□□□□ -2.55
SMAD4-207ENST00000589076 SNHG12Q9BXW3 62 aa-0.86□□□□□ -2.55
SMAD4-207ENST00000589076 PKIAP61925 76 aa-0.87□□□□□ -2.55
SMAD4-207ENST00000589076 GAFA1Q96PS6 74 aa-0.87□□□□□ -2.55
SMAD4-207ENST00000589076 C20orf78Q9BR46 151 aa-0.87□□□□□ -2.55
SMAD4-207ENST00000589076 A0A1B0GUL6 1792 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 IQCF6A8MYZ5 107 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 CYB5AP00167 134 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 SMIM5Q71RC9 77 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 PPLO60437 1756 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 ANKRD36CQ5JPF3 1778 aa-0.88□□□□□ -2.55
SMAD4-207ENST00000589076 NCOA2Q15596 1464 aa-0.89□□□□□ -2.55
SMAD4-207ENST00000589076 ABCC8Q09428 1581 aa-0.91□□□□□ -2.55
SMAD4-207ENST00000589076 NDUFA3O95167 84 aa-0.91□□□□□ -2.56
SMAD4-207ENST00000589076 H0YAA0 97 aa-0.92□□□□□ -2.56
SMAD4-207ENST00000589076 SYCP2Q9BX26 1530 aa-0.94□□□□□ -2.56
SMAD4-207ENST00000589076 TRAV21A0A0B4J279 112 aa-0.95□□□□□ -2.56
SMAD4-207ENST00000589076 MYMXA0A1B0GTQ4 84 aa-0.95□□□□□ -2.56
SMAD4-207ENST00000589076 H3BNG1 76 aa-0.95□□□□□ -2.56
SMAD4-207ENST00000589076 WFDC9Q8NEX5 89 aa-0.95□□□□□ -2.56
SMAD4-207ENST00000589076 CCNB3Q8WWL7 1395 aa-0.96□□□□□ -2.56
SMAD4-207ENST00000589076 ARFGEF2Q9Y6D5 1785 aa-0.96□□□□□ -2.56
SMAD4-207ENST00000589076 PLIN4Q96Q06 1357 aa-0.97□□□□□ -2.57
SMAD4-207ENST00000589076 MT1EP04732 61 aa-0.98□□□□□ -2.57
SMAD4-207ENST00000589076 SNRPFP62306 86 aaKnown RBP-0.98□□□□□ -2.57
SMAD4-207ENST00000589076 PYY3Q5JQD4 70 aa-0.98□□□□□ -2.57
SMAD4-207ENST00000589076 NDUFB1O75438 58 aa-0.99□□□□□ -2.57
SMAD4-207ENST00000589076 MT1AP04731 61 aa-0.99□□□□□ -2.57
SMAD4-207ENST00000589076 Q9H521 79 aa-0.99□□□□□ -2.57
SMAD4-207ENST00000589076 ABCA10Q8WWZ4 1543 aa-0.99□□□□□ -2.57
SMAD4-207ENST00000589076 C3orf79P0CE67 100 aa-1□□□□□ -2.57
SMAD4-207ENST00000589076 RABAC1Q9UI14 185 aa-1□□□□□ -2.57
SMAD4-207ENST00000589076 K7EP34 96 aa-1.01□□□□□ -2.57
SMAD4-207ENST00000589076 LINC00643Q86TS7 51 aa-1.01□□□□□ -2.57
SMAD4-207ENST00000589076 V9GYS6 101 aa-1.01□□□□□ -2.57
SMAD4-207ENST00000589076 C9orf92A6NGG3 77 aa-1.02□□□□□ -2.57
SMAD4-207ENST00000589076 CEBPZOSA8MTT3 80 aa-1.02□□□□□ -2.57
SMAD4-207ENST00000589076 S100A16Q96FQ6 103 aaKnown RBP-1.02□□□□□ -2.57
SMAD4-207ENST00000589076 PVALEFA0A1B0GWK0 134 aa-1.03□□□□□ -2.57
SMAD4-207ENST00000589076 LINC00158P58513 81 aa-1.04□□□□□ -2.58
SMAD4-207ENST00000589076 ACYP1P07311 99 aa-1.05□□□□□ -2.58
SMAD4-207ENST00000589076 FANCD2Q9BXW9 1451 aa-1.05□□□□□ -2.58
SMAD4-207ENST00000589076 IFI27P40305 119 aaPredicted RBP-1.11□□□□□ -2.59
SMAD4-207ENST00000589076 DEFA5Q01523 94 aa-1.11□□□□□ -2.59
SMAD4-207ENST00000589076 IQGAP2Q13576 1575 aa-1.12□□□□□ -2.59
SMAD4-207ENST00000589076 UMAD1C9J7I0 102 aa-1.12□□□□□ -2.59
SMAD4-207ENST00000589076 KANTRA0A1W2PQU2 76 aa-1.13□□□□□ -2.59
SMAD4-207ENST00000589076 PRXQ9BXM0 1461 aa-1.13□□□□□ -2.59
SMAD4-207ENST00000589076 PRLHP81277 87 aa-1.14□□□□□ -2.59
SMAD4-207ENST00000589076 MT1XP80297 61 aa-1.16□□□□□ -2.6
SMAD4-207ENST00000589076 ATP5EP2Q5VTU8 51 aa-1.16□□□□□ -2.6
SMAD4-207ENST00000589076 NDUFA4O00483 81 aa-1.17□□□□□ -2.6
SMAD4-207ENST00000589076 IFI6P09912 130 aa-1.17□□□□□ -2.6
SMAD4-207ENST00000589076 MT1LQ93083 61 aa-1.17□□□□□ -2.6
SMAD4-207ENST00000589076 TOP2AP11388 1531 aaKnown RBP-1.18□□□□□ -2.6
SMAD4-207ENST00000589076 RPS29P62273 56 aaKnown RBP-1.18□□□□□ -2.6
SMAD4-207ENST00000589076 S4R3F8 94 aa-1.18□□□□□ -2.6
SMAD4-207ENST00000589076 IAPPP10997 89 aa-1.19□□□□□ -2.6
SMAD4-207ENST00000589076 TDRG1Q3Y452 100 aa-1.19□□□□□ -2.6
SMAD4-207ENST00000589076 CD163L1Q9NR16 1453 aa-1.19□□□□□ -2.6
SMAD4-207ENST00000589076 NREPQ16612 68 aa-1.2□□□□□ -2.6
SMAD4-207ENST00000589076 DEFB130BP0DP73 79 aa-1.21□□□□□ -2.6
SMAD4-207ENST00000589076 DEFB130AP0DP74 79 aa-1.21□□□□□ -2.6
SMAD4-207ENST00000589076 HMGA1P17096 107 aaKnown RBP-1.22□□□□□ -2.6
SMAD4-207ENST00000589076 STATHP02808 62 aa-1.23□□□□□ -2.61
SMAD4-207ENST00000589076 DEFB110Q30KQ9 67 aa-1.24□□□□□ -2.61
SMAD4-207ENST00000589076 A0A087WXM4 84 aa-1.25□□□□□ -2.61
SMAD4-207ENST00000589076 DEFB131BA0A096LNP1 70 aa-1.25□□□□□ -2.61
SMAD4-207ENST00000589076 ST20Q9HBF5 79 aa-1.25□□□□□ -2.61
SMAD4-207ENST00000589076 TFF3Q07654 80 aa-1.26□□□□□ -2.61
SMAD4-207ENST00000589076 DEFB106AQ8N104 65 aa-1.26□□□□□ -2.61
SMAD4-207ENST00000589076 MRPL33O75394 65 aaKnown RBP-1.27□□□□□ -2.61
SMAD4-207ENST00000589076 ADIRFQ15847 76 aa-1.27□□□□□ -2.61
SMAD4-207ENST00000589076 GNG2P59768 71 aa-1.28□□□□□ -2.61
SMAD4-207ENST00000589076 IQGAP3Q86VI3 1631 aa-1.29□□□□□ -2.62
SMAD4-207ENST00000589076 SMIM13P0DJ93 91 aa-1.29□□□□□ -2.62
SMAD4-207ENST00000589076 S100A13Q99584 98 aa-1.3□□□□□ -2.62
SMAD4-207ENST00000589076 KCNQ1DNQ9H478 68 aa-1.32□□□□□ -2.62
SMAD4-207ENST00000589076 H3BUT2 72 aa-1.33□□□□□ -2.62
SMAD4-207ENST00000589076 UBL5Q9BZL1 73 aa-1.33□□□□□ -2.62
SMAD4-207ENST00000589076 BVES-AS1Q5T3Y7 98 aa-1.38□□□□□ -2.63
SMAD4-207ENST00000589076 DEFB1P60022 68 aa-1.4□□□□□ -2.63
SMAD4-207ENST00000589076 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.4□□□□□ -2.63
SMAD4-207ENST00000589076 CRIP1P50238 77 aa-1.41□□□□□ -2.64
SMAD4-207ENST00000589076 WT1-ASQ06250 92 aa-1.41□□□□□ -2.64
SMAD4-207ENST00000589076 KRTAP19-5Q3LI72 72 aa-1.41□□□□□ -2.64
SMAD4-207ENST00000589076 TTTY10Q9BZA0 68 aa-1.41□□□□□ -2.64
SMAD4-207ENST00000589076 ANKARQ7Z5J8 1434 aa-1.41□□□□□ -2.64
SMAD4-207ENST00000589076 ENHOQ6UWT2 76 aa-1.45□□□□□ -2.64
SMAD4-207ENST00000589076 C18orf32Q8TCD1 76 aa-1.45□□□□□ -2.64
SMAD4-207ENST00000589076 ETDCA0A1B0GVM5 59 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms