RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
ATG4D-210ENST00000588972 J3KT08 172 aa3.96□□□□□ -1.78
ATG4D-210ENST00000588972 ATP5EP2Q5VTU8 51 aa3.96□□□□□ -1.78
ATG4D-210ENST00000588972 LINC00643Q86TS7 51 aa3.96□□□□□ -1.78
ATG4D-210ENST00000588972 A6NED7 52 aa3.95□□□□□ -1.78
ATG4D-210ENST00000588972 PCOTHQ58A44 107 aa3.95□□□□□ -1.78
ATG4D-210ENST00000588972 USH2AO75445 5202 aa3.95□□□□□ -1.78
ATG4D-210ENST00000588972 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
ATG4D-210ENST00000588972 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
ATG4D-210ENST00000588972 IMUPQ9GZP8 106 aa3.94□□□□□ -1.78
ATG4D-210ENST00000588972 LINC00472Q9H8W2 130 aa3.94□□□□□ -1.78
ATG4D-210ENST00000588972 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
ATG4D-210ENST00000588972 M0R2T5 61 aa3.92□□□□□ -1.78
ATG4D-210ENST00000588972 MT-ATP8P03928 68 aa3.92□□□□□ -1.78
ATG4D-210ENST00000588972 LINC00313P59037 77 aa3.91□□□□□ -1.78
ATG4D-210ENST00000588972 NDUFB1O75438 58 aa3.9□□□□□ -1.79
ATG4D-210ENST00000588972 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
ATG4D-210ENST00000588972 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
ATG4D-210ENST00000588972 C20orf166-AS1Q96NR2 134 aa3.88□□□□□ -1.79
ATG4D-210ENST00000588972 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
ATG4D-210ENST00000588972 COX6B2Q6YFQ2 88 aa3.87□□□□□ -1.79
ATG4D-210ENST00000588972 ATP11AUNQ6ZP68 121 aa3.87□□□□□ -1.79
ATG4D-210ENST00000588972 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
ATG4D-210ENST00000588972 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
ATG4D-210ENST00000588972 IGKV3D-7A0A0C4DH55 119 aa3.86□□□□□ -1.79
ATG4D-210ENST00000588972 R4GN34 69 aa3.85□□□□□ -1.79
ATG4D-210ENST00000588972 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
ATG4D-210ENST00000588972 K7EQZ3 153 aa3.84□□□□□ -1.79
ATG4D-210ENST00000588972 ATOX1O00244 68 aa3.84□□□□□ -1.79
ATG4D-210ENST00000588972 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
ATG4D-210ENST00000588972 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
ATG4D-210ENST00000588972 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
ATG4D-210ENST00000588972 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
ATG4D-210ENST00000588972 HCG22E2RYF7 251 aa3.82□□□□□ -1.8
ATG4D-210ENST00000588972 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
ATG4D-210ENST00000588972 TMEM254Q8TBM7 123 aa3.81□□□□□ -1.8
ATG4D-210ENST00000588972 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
ATG4D-210ENST00000588972 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
ATG4D-210ENST00000588972 UQCRQO14949 82 aa3.8□□□□□ -1.8
ATG4D-210ENST00000588972 CASC2Q6XLA1 102 aa3.8□□□□□ -1.8
ATG4D-210ENST00000588972 SMIM20Q8N5G0 67 aa3.8□□□□□ -1.8
ATG4D-210ENST00000588972 A0A1B0GU33 70 aa3.79□□□□□ -1.8
ATG4D-210ENST00000588972 HRES1P13985 223 aa3.79□□□□□ -1.8
ATG4D-210ENST00000588972 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
ATG4D-210ENST00000588972 A0A087WVE0 104 aa3.78□□□□□ -1.8
ATG4D-210ENST00000588972 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
ATG4D-210ENST00000588972 COX7CP15954 63 aa3.77□□□□□ -1.81
ATG4D-210ENST00000588972 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
ATG4D-210ENST00000588972 ZCCHC13Q8WW36 166 aaKnown RBP3.77□□□□□ -1.81
ATG4D-210ENST00000588972 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
ATG4D-210ENST00000588972 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
ATG4D-210ENST00000588972 CCDC179H3BU77 68 aa3.74□□□□□ -1.81
ATG4D-210ENST00000588972 TRAV7A0A075B6U4 112 aa3.72□□□□□ -1.81
ATG4D-210ENST00000588972 TMEM258P61165 79 aa3.72□□□□□ -1.81
ATG4D-210ENST00000588972 SPINK7P58062 85 aa3.71□□□□□ -1.82
ATG4D-210ENST00000588972 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
ATG4D-210ENST00000588972 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
ATG4D-210ENST00000588972 TRAV22A0A0B4J277 110 aa3.69□□□□□ -1.82
ATG4D-210ENST00000588972 H3BPC8 53 aa3.69□□□□□ -1.82
ATG4D-210ENST00000588972 NDUFC1O43677 76 aa3.69□□□□□ -1.82
ATG4D-210ENST00000588972 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
ATG4D-210ENST00000588972 MT2AP02795 61 aa3.67□□□□□ -1.82
ATG4D-210ENST00000588972 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
ATG4D-210ENST00000588972 NEBP20929 6669 aa3.67□□□□□ -1.82
ATG4D-210ENST00000588972 LOC101927531A0A1B0GV80 90 aa3.66□□□□□ -1.82
ATG4D-210ENST00000588972 H0Y9P7 68 aa3.65□□□□□ -1.83
ATG4D-210ENST00000588972 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
ATG4D-210ENST00000588972 MT1FP04733 61 aa3.64□□□□□ -1.83
ATG4D-210ENST00000588972 KLKP1Q107X0 134 aa3.64□□□□□ -1.83
ATG4D-210ENST00000588972 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
ATG4D-210ENST00000588972 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
ATG4D-210ENST00000588972 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
ATG4D-210ENST00000588972 A8MUN3 132 aa3.61□□□□□ -1.83
ATG4D-210ENST00000588972 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
ATG4D-210ENST00000588972 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
ATG4D-210ENST00000588972 CYP4F30PQ9H0H9 118 aa3.6□□□□□ -1.83
ATG4D-210ENST00000588972 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
ATG4D-210ENST00000588972 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
ATG4D-210ENST00000588972 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
ATG4D-210ENST00000588972 P0C880 135 aa3.58□□□□□ -1.84
ATG4D-210ENST00000588972 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
ATG4D-210ENST00000588972 H7BZZ5 65 aa3.57□□□□□ -1.84
ATG4D-210ENST00000588972 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
ATG4D-210ENST00000588972 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
ATG4D-210ENST00000588972 CYSTM1Q9H1C7 97 aa3.53□□□□□ -1.84
ATG4D-210ENST00000588972 S4R3F8 94 aa3.49□□□□□ -1.85
ATG4D-210ENST00000588972 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
ATG4D-210ENST00000588972 LCA10Q71F78 164 aa3.47□□□□□ -1.85
ATG4D-210ENST00000588972 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
ATG4D-210ENST00000588972 ACYP2P14621 99 aa3.46□□□□□ -1.86
ATG4D-210ENST00000588972 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
ATG4D-210ENST00000588972 KMT2DO14686 5537 aa3.41□□□□□ -1.86
ATG4D-210ENST00000588972 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
ATG4D-210ENST00000588972 SPTSSBQ8NFR3 76 aa3.4□□□□□ -1.87
ATG4D-210ENST00000588972 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
ATG4D-210ENST00000588972 Q1T7F1 81 aa3.39□□□□□ -1.87
ATG4D-210ENST00000588972 COA5Q86WW8 74 aa3.38□□□□□ -1.87
ATG4D-210ENST00000588972 A6NN06 94 aa3.35□□□□□ -1.87
ATG4D-210ENST00000588972 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
ATG4D-210ENST00000588972 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 279 ms