RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ROMO1P60602 79 aa2.77□□□□□ -1.97
ZNF540-204ENST00000586792 Q9BRP9 147 aa2.77□□□□□ -1.97
ZNF540-204ENST00000586792 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
ZNF540-204ENST00000586792 HCG22E2RYF7 251 aa2.76□□□□□ -1.97
ZNF540-204ENST00000586792 Q5W150 140 aa2.76□□□□□ -1.97
ZNF540-204ENST00000586792 KRTAP11-1Q8IUC1 163 aa2.76□□□□□ -1.97
ZNF540-204ENST00000586792 LINC00846Q9NV44 126 aa2.76□□□□□ -1.97
ZNF540-204ENST00000586792 LRP1Q07954 4544 aaKnown RBP2.75□□□□□ -1.97
ZNF540-204ENST00000586792 LOC110117498A0A087WWA1 95 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 NCR3O14931 201 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 MT1HL1P0DM35 61 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 PRLHP81277 87 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 ST20-AS1Q8NBB2 130 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 HIGD2AQ9BW72 106 aa2.75□□□□□ -1.97
ZNF540-204ENST00000586792 CHKB-CPT1BH3BT56 60 aa2.74□□□□□ -1.97
ZNF540-204ENST00000586792 NREPQ16612 68 aa2.74□□□□□ -1.97
ZNF540-204ENST00000586792 ORMDL1Q9P0S3 153 aa2.74□□□□□ -1.97
ZNF540-204ENST00000586792 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
ZNF540-204ENST00000586792 Q5VV11 94 aa2.73□□□□□ -1.97
ZNF540-204ENST00000586792 HERC1Q15751 4861 aa2.73□□□□□ -1.97
ZNF540-204ENST00000586792 A0A087WSZ3 146 aa2.72□□□□□ -1.97
ZNF540-204ENST00000586792 A0A087WVE0 104 aa2.72□□□□□ -1.97
ZNF540-204ENST00000586792 A0A1B0GU33 70 aa2.72□□□□□ -1.97
ZNF540-204ENST00000586792 TNXBP22105 4242 aa2.72□□□□□ -1.97
ZNF540-204ENST00000586792 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
ZNF540-204ENST00000586792 SPTSSBQ8NFR3 76 aa2.71□□□□□ -1.98
ZNF540-204ENST00000586792 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
ZNF540-204ENST00000586792 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
ZNF540-204ENST00000586792 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
ZNF540-204ENST00000586792 KCNQ1DNQ9H478 68 aa2.7□□□□□ -1.98
ZNF540-204ENST00000586792 SPRR1AP35321 89 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 Q6ZRX8 168 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 LINC00308Q8TCZ7 52 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 SPRR4Q96PI1 79 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 ANAPC11Q9NYG5 84 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 SNURFQ9Y675 71 aa2.69□□□□□ -1.98
ZNF540-204ENST00000586792 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
ZNF540-204ENST00000586792 MIR22HGQ0VDD5 57 aa2.68□□□□□ -1.98
ZNF540-204ENST00000586792 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
ZNF540-204ENST00000586792 HMCN2Q8NDA2 5059 aa2.67□□□□□ -1.98
ZNF540-204ENST00000586792 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
ZNF540-204ENST00000586792 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
ZNF540-204ENST00000586792 LINC00208Q96KT6 92 aa2.67□□□□□ -1.98
ZNF540-204ENST00000586792 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
ZNF540-204ENST00000586792 COX7BP24311 80 aa2.66□□□□□ -1.98
ZNF540-204ENST00000586792 MOBPQ13875 183 aa2.66□□□□□ -1.98
ZNF540-204ENST00000586792 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
ZNF540-204ENST00000586792 SPINK1P00995 79 aa2.65□□□□□ -1.99
ZNF540-204ENST00000586792 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
ZNF540-204ENST00000586792 LINC00483Q53H64 154 aa2.65□□□□□ -1.99
ZNF540-204ENST00000586792 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
ZNF540-204ENST00000586792 PRR15LQ9BU68 103 aa2.64□□□□□ -1.99
ZNF540-204ENST00000586792 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
ZNF540-204ENST00000586792 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
ZNF540-204ENST00000586792 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-204ENST00000586792 SMIM11BQ8TCY0 68 aa2.62□□□□□ -1.99
ZNF540-204ENST00000586792 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
ZNF540-204ENST00000586792 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
ZNF540-204ENST00000586792 LPAP08519 4548 aa2.61□□□□□ -1.99
ZNF540-204ENST00000586792 H0Y9P7 68 aa2.6□□□□□ -1.99
ZNF540-204ENST00000586792 SPRR1BP22528 89 aa2.6□□□□□ -1.99
ZNF540-204ENST00000586792 DMAC1Q96GE9 116 aa2.6□□□□□ -1.99
ZNF540-204ENST00000586792 UQCR11O14957 56 aa2.59□□□□□ -1.99
ZNF540-204ENST00000586792 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
ZNF540-204ENST00000586792 R4GN34 69 aa2.59□□□□□ -1.99
ZNF540-204ENST00000586792 IGLV5-48A0A075B6I7 105 aa2.58□□□□□ -2
ZNF540-204ENST00000586792 LINC00575Q6W349 94 aa2.58□□□□□ -2
ZNF540-204ENST00000586792 Q6ZQY7 126 aa2.58□□□□□ -2
ZNF540-204ENST00000586792 IGKV4-1P06312 121 aa2.57□□□□□ -2
ZNF540-204ENST00000586792 LRP2P98164 4655 aa2.57□□□□□ -2
ZNF540-204ENST00000586792 A0A1W2PNM2 257 aa2.56□□□□□ -2
ZNF540-204ENST00000586792 P0C880 135 aa2.56□□□□□ -2
ZNF540-204ENST00000586792 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
ZNF540-204ENST00000586792 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
ZNF540-204ENST00000586792 MUC17Q685J3 4493 aa2.54□□□□□ -2
ZNF540-204ENST00000586792 CSAG1Q6PB30 78 aa2.54□□□□□ -2
ZNF540-204ENST00000586792 C9orf92A6NGG3 77 aa2.53□□□□□ -2
ZNF540-204ENST00000586792 IGFL1Q6UW32 110 aa2.53□□□□□ -2
ZNF540-204ENST00000586792 COA5Q86WW8 74 aa2.53□□□□□ -2
ZNF540-204ENST00000586792 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
ZNF540-204ENST00000586792 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
ZNF540-204ENST00000586792 TP53AIP1Q9HCN2 124 aa2.52□□□□□ -2.01
ZNF540-204ENST00000586792 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
ZNF540-204ENST00000586792 HRES1P13985 223 aa2.5□□□□□ -2.01
ZNF540-204ENST00000586792 Q8N9L7 120 aa2.49□□□□□ -2.01
ZNF540-204ENST00000586792 MUC2Q02817 5179 aa2.48□□□□□ -2.01
ZNF540-204ENST00000586792 PCOTHQ58A44 107 aa2.48□□□□□ -2.01
ZNF540-204ENST00000586792 RPL37P61927 97 aaKnown RBP2.47□□□□□ -2.01
ZNF540-204ENST00000586792 SPINK7P58062 85 aa2.46□□□□□ -2.02
ZNF540-204ENST00000586792 Q96NJ1 140 aa2.46□□□□□ -2.02
ZNF540-204ENST00000586792 A0A1B0GU69 56 aa2.44□□□□□ -2.02
ZNF540-204ENST00000586792 ACYP2P14621 99 aa2.44□□□□□ -2.02
ZNF540-204ENST00000586792 COX6B2Q6YFQ2 88 aa2.44□□□□□ -2.02
ZNF540-204ENST00000586792 M0R2T5 61 aa2.41□□□□□ -2.02
ZNF540-204ENST00000586792 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
ZNF540-204ENST00000586792 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
ZNF540-204ENST00000586792 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
ZNF540-204ENST00000586792 K7EQZ3 153 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms