RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
BRCA1-225ENST00000586385 BPY2O14599 106 aa5.2□□□□□ -1.58
BRCA1-225ENST00000586385 LCA10Q71F78 164 aa5.19□□□□□ -1.58
BRCA1-225ENST00000586385 KLKP1Q107X0 134 aa5.18□□□□□ -1.58
BRCA1-225ENST00000586385 S4R3F8 94 aa5.18□□□□□ -1.58
BRCA1-225ENST00000586385 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
BRCA1-225ENST00000586385 HCG22E2RYF7 251 aa5.16□□□□□ -1.58
BRCA1-225ENST00000586385 Q8N9L7 120 aa5.16□□□□□ -1.58
BRCA1-225ENST00000586385 CASC2Q6XLA1 102 aa5.14□□□□□ -1.59
BRCA1-225ENST00000586385 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
BRCA1-225ENST00000586385 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
BRCA1-225ENST00000586385 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
BRCA1-225ENST00000586385 SPRR2EP22531 72 aa5.11□□□□□ -1.59
BRCA1-225ENST00000586385 SPRR2BP35325 72 aa5.11□□□□□ -1.59
BRCA1-225ENST00000586385 SPRR2AP35326 72 aa5.11□□□□□ -1.59
BRCA1-225ENST00000586385 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
BRCA1-225ENST00000586385 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
BRCA1-225ENST00000586385 A0A087WVE0 104 aa5.06□□□□□ -1.6
BRCA1-225ENST00000586385 ATOX1O00244 68 aa5.05□□□□□ -1.6
BRCA1-225ENST00000586385 MT-ATP8P03928 68 aa5.05□□□□□ -1.6
BRCA1-225ENST00000586385 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
BRCA1-225ENST00000586385 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
BRCA1-225ENST00000586385 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
BRCA1-225ENST00000586385 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
BRCA1-225ENST00000586385 MT1XP80297 61 aa5.03□□□□□ -1.6
BRCA1-225ENST00000586385 TP53AIP1Q9HCN2 124 aa5.03□□□□□ -1.6
BRCA1-225ENST00000586385 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
BRCA1-225ENST00000586385 UQCRQO14949 82 aa4.96□□□□□ -1.62
BRCA1-225ENST00000586385 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
BRCA1-225ENST00000586385 H3BPC8 53 aa4.95□□□□□ -1.62
BRCA1-225ENST00000586385 ANAPC13Q9BS18 74 aa4.95□□□□□ -1.62
BRCA1-225ENST00000586385 SPRR2DP22532 72 aa4.94□□□□□ -1.62
BRCA1-225ENST00000586385 MP68P56378 58 aa4.94□□□□□ -1.62
BRCA1-225ENST00000586385 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
BRCA1-225ENST00000586385 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
BRCA1-225ENST00000586385 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
BRCA1-225ENST00000586385 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
BRCA1-225ENST00000586385 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
BRCA1-225ENST00000586385 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
BRCA1-225ENST00000586385 H0YAA0 97 aa4.91□□□□□ -1.62
BRCA1-225ENST00000586385 TRAV22A0A0B4J277 110 aa4.89□□□□□ -1.63
BRCA1-225ENST00000586385 NDUFC1O43677 76 aa4.89□□□□□ -1.63
BRCA1-225ENST00000586385 COX7CP15954 63 aa4.88□□□□□ -1.63
BRCA1-225ENST00000586385 OCR1Q9BZK8 76 aa4.88□□□□□ -1.63
BRCA1-225ENST00000586385 A8MUN3 132 aa4.87□□□□□ -1.63
BRCA1-225ENST00000586385 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
BRCA1-225ENST00000586385 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
BRCA1-225ENST00000586385 PCP4P48539 62 aa4.83□□□□□ -1.64
BRCA1-225ENST00000586385 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
BRCA1-225ENST00000586385 H0Y9P7 68 aa4.82□□□□□ -1.64
BRCA1-225ENST00000586385 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
BRCA1-225ENST00000586385 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-225ENST00000586385 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-225ENST00000586385 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
BRCA1-225ENST00000586385 LINC00208Q96KT6 92 aa4.78□□□□□ -1.64
BRCA1-225ENST00000586385 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
BRCA1-225ENST00000586385 P0C880 135 aa4.75□□□□□ -1.65
BRCA1-225ENST00000586385 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
BRCA1-225ENST00000586385 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
BRCA1-225ENST00000586385 TMEM258P61165 79 aa4.73□□□□□ -1.65
BRCA1-225ENST00000586385 R4GN34 69 aa4.71□□□□□ -1.66
BRCA1-225ENST00000586385 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
BRCA1-225ENST00000586385 M0QZ58 72 aa4.69□□□□□ -1.66
BRCA1-225ENST00000586385 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
BRCA1-225ENST00000586385 H7BZZ5 65 aa4.66□□□□□ -1.66
BRCA1-225ENST00000586385 ACYP2P14621 99 aa4.64□□□□□ -1.67
BRCA1-225ENST00000586385 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
BRCA1-225ENST00000586385 SPTSSBQ8NFR3 76 aa4.62□□□□□ -1.67
BRCA1-225ENST00000586385 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
BRCA1-225ENST00000586385 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
BRCA1-225ENST00000586385 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
BRCA1-225ENST00000586385 CHKB-CPT1BH3BT56 60 aa4.56□□□□□ -1.68
BRCA1-225ENST00000586385 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
BRCA1-225ENST00000586385 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
BRCA1-225ENST00000586385 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
BRCA1-225ENST00000586385 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
BRCA1-225ENST00000586385 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
BRCA1-225ENST00000586385 V9GYY9 64 aa4.51□□□□□ -1.69
BRCA1-225ENST00000586385 COA5Q86WW8 74 aa4.48□□□□□ -1.69
BRCA1-225ENST00000586385 MT1EP04732 61 aa4.47□□□□□ -1.69
BRCA1-225ENST00000586385 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
BRCA1-225ENST00000586385 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
BRCA1-225ENST00000586385 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
BRCA1-225ENST00000586385 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
BRCA1-225ENST00000586385 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
BRCA1-225ENST00000586385 SEC61GP60059 68 aa4.45□□□□□ -1.7
BRCA1-225ENST00000586385 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
BRCA1-225ENST00000586385 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
BRCA1-225ENST00000586385 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
BRCA1-225ENST00000586385 MT4P47944 62 aa4.36□□□□□ -1.71
BRCA1-225ENST00000586385 Q1T7F1 81 aa4.36□□□□□ -1.71
BRCA1-225ENST00000586385 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
BRCA1-225ENST00000586385 A0A1B0GU69 56 aa4.33□□□□□ -1.72
BRCA1-225ENST00000586385 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
BRCA1-225ENST00000586385 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
BRCA1-225ENST00000586385 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
BRCA1-225ENST00000586385 MT1GP13640 62 aa4.3□□□□□ -1.72
BRCA1-225ENST00000586385 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
BRCA1-225ENST00000586385 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
BRCA1-225ENST00000586385 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms