RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
SS18-224ENST00000584083 J3QR89 54 aa9.2□□□□□ -0.94
SS18-224ENST00000584083 MP68P56378 58 aa9.19□□□□□ -0.94
SS18-224ENST00000584083 SPRR2GQ9BYE4 73 aa9.19□□□□□ -0.94
SS18-224ENST00000584083 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
SS18-224ENST00000584083 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
SS18-224ENST00000584083 NDUFC1O43677 76 aa9.17□□□□□ -0.94
SS18-224ENST00000584083 Q5VV11 94 aa9.17□□□□□ -0.94
SS18-224ENST00000584083 A8MUN3 132 aa9.14□□□□□ -0.95
SS18-224ENST00000584083 IMUPQ9GZP8 106 aa9.14□□□□□ -0.95
SS18-224ENST00000584083 MT1BP07438 61 aa9.13□□□□□ -0.95
SS18-224ENST00000584083 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
SS18-224ENST00000584083 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
SS18-224ENST00000584083 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
SS18-224ENST00000584083 A6NN06 94 aa9.05□□□□□ -0.96
SS18-224ENST00000584083 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
SS18-224ENST00000584083 H3BPC8 53 aa9.03□□□□□ -0.96
SS18-224ENST00000584083 H0YAA0 97 aa9.02□□□□□ -0.97
SS18-224ENST00000584083 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
SS18-224ENST00000584083 KRTAP10-5P60370 271 aa8.92□□□□□ -0.98
SS18-224ENST00000584083 KRTAP6-3Q3LI67 103 aa8.92□□□□□ -0.98
SS18-224ENST00000584083 DMAC1Q96GE9 116 aa8.88□□□□□ -0.99
SS18-224ENST00000584083 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
SS18-224ENST00000584083 K7ERU9 68 aa8.85□□□□□ -0.99
SS18-224ENST00000584083 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
SS18-224ENST00000584083 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
SS18-224ENST00000584083 C20orf197Q8N268 126 aa8.78□□□□□ -1
SS18-224ENST00000584083 P0C880 135 aa8.76□□□□□ -1.01
SS18-224ENST00000584083 R4GN34 69 aa8.75□□□□□ -1.01
SS18-224ENST00000584083 ACYP2P14621 99 aa8.72□□□□□ -1.01
SS18-224ENST00000584083 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
SS18-224ENST00000584083 M0QZ58 72 aa8.68□□□□□ -1.02
SS18-224ENST00000584083 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
SS18-224ENST00000584083 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
SS18-224ENST00000584083 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
SS18-224ENST00000584083 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
SS18-224ENST00000584083 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
SS18-224ENST00000584083 MT1XP80297 61 aa8.57□□□□□ -1.04
SS18-224ENST00000584083 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
SS18-224ENST00000584083 NEBP20929 6669 aa8.5□□□□□ -1.05
SS18-224ENST00000584083 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
SS18-224ENST00000584083 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
SS18-224ENST00000584083 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
SS18-224ENST00000584083 KMT2DO14686 5537 aa8.37□□□□□ -1.07
SS18-224ENST00000584083 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
SS18-224ENST00000584083 SPRR2FQ96RM1 72 aa8.32□□□□□ -1.08
SS18-224ENST00000584083 KRTAP8-1Q8IUC2 63 aa8.31□□□□□ -1.08
SS18-224ENST00000584083 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
SS18-224ENST00000584083 KRTAP20-1Q3LI63 56 aa8.26□□□□□ -1.09
SS18-224ENST00000584083 COA5Q86WW8 74 aa8.25□□□□□ -1.09
SS18-224ENST00000584083 COX7CP15954 63 aa8.23□□□□□ -1.09
SS18-224ENST00000584083 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
SS18-224ENST00000584083 SPRR2EP22531 72 aa8.2□□□□□ -1.1
SS18-224ENST00000584083 SPRR2BP35325 72 aa8.2□□□□□ -1.1
SS18-224ENST00000584083 SPRR2AP35326 72 aa8.2□□□□□ -1.1
SS18-224ENST00000584083 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
SS18-224ENST00000584083 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
SS18-224ENST00000584083 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
SS18-224ENST00000584083 SEC61GP60059 68 aa8.13□□□□□ -1.11
SS18-224ENST00000584083 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
SS18-224ENST00000584083 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
SS18-224ENST00000584083 H7BZZ5 65 aa8.09□□□□□ -1.11
SS18-224ENST00000584083 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
SS18-224ENST00000584083 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
SS18-224ENST00000584083 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
SS18-224ENST00000584083 LCE1AQ5T7P2 110 aa8.06□□□□□ -1.12
SS18-224ENST00000584083 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
SS18-224ENST00000584083 A0A0D9SG42 100 aa7.99□□□□□ -1.13
SS18-224ENST00000584083 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
SS18-224ENST00000584083 A0A1B0GU33 70 aa7.97□□□□□ -1.13
SS18-224ENST00000584083 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
SS18-224ENST00000584083 SPRR2DP22532 72 aa7.92□□□□□ -1.14
SS18-224ENST00000584083 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
SS18-224ENST00000584083 A0A1B0GU69 56 aa7.85□□□□□ -1.15
SS18-224ENST00000584083 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
SS18-224ENST00000584083 KRTAP2-2Q9BYT5 123 aa7.8□□□□□ -1.16
SS18-224ENST00000584083 KRTAP2-1Q9BYU5 128 aa7.8□□□□□ -1.16
SS18-224ENST00000584083 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
SS18-224ENST00000584083 SMIM26A0A096LP01 95 aa7.74□□□□□ -1.17
SS18-224ENST00000584083 ATP5EP56381 51 aaPredicted RBP7.7□□□□□ -1.18
SS18-224ENST00000584083 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
SS18-224ENST00000584083 A8MU10 97 aa7.68□□□□□ -1.18
SS18-224ENST00000584083 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
SS18-224ENST00000584083 PRR15LQ9BU68 103 aa7.63□□□□□ -1.19
SS18-224ENST00000584083 MT1EP04732 61 aa7.59□□□□□ -1.19
SS18-224ENST00000584083 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
SS18-224ENST00000584083 LCE5AQ5TCM9 118 aa7.52□□□□□ -1.21
SS18-224ENST00000584083 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
SS18-224ENST00000584083 TMEM258P61165 79 aa7.5□□□□□ -1.21
SS18-224ENST00000584083 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
SS18-224ENST00000584083 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
SS18-224ENST00000584083 TNP1P09430 55 aa7.44□□□□□ -1.22
SS18-224ENST00000584083 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
SS18-224ENST00000584083 UQCR11O14957 56 aa7.36□□□□□ -1.23
SS18-224ENST00000584083 MT1GP13640 62 aa7.36□□□□□ -1.23
SS18-224ENST00000584083 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
SS18-224ENST00000584083 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SS18-224ENST00000584083 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
SS18-224ENST00000584083 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
SS18-224ENST00000584083 MT1LQ93083 61 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms