RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CYP4F30PQ9H0H9 118 aa10.24□□□□□ -0.77
SRSF1-206ENST00000583741 MACF1Q9UPN3 7388 aaKnown RBP10.23□□□□□ -0.77
SRSF1-206ENST00000583741 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
SRSF1-206ENST00000583741 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
SRSF1-206ENST00000583741 KRTAP9-3Q9BYQ3 159 aa10.22□□□□□ -0.77
SRSF1-206ENST00000583741 SYNE2Q8WXH0 6885 aaKnown RBP10.19□□□□□ -0.78
SRSF1-206ENST00000583741 PCP4P48539 62 aa10.19□□□□□ -0.78
SRSF1-206ENST00000583741 FAM236DA0A1B0GTK5 79 aa10.17□□□□□ -0.78
SRSF1-206ENST00000583741 FAM236CP0DP71 79 aa10.17□□□□□ -0.78
SRSF1-206ENST00000583741 KRTAP10-10P60014 251 aa10.15□□□□□ -0.78
SRSF1-206ENST00000583741 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
SRSF1-206ENST00000583741 CYSTM1Q9H1C7 97 aa10.11□□□□□ -0.79
SRSF1-206ENST00000583741 HRES1P13985 223 aa10.1□□□□□ -0.79
SRSF1-206ENST00000583741 NDUFC1O43677 76 aa10.09□□□□□ -0.79
SRSF1-206ENST00000583741 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
SRSF1-206ENST00000583741 H7BZZ5 65 aa10.04□□□□□ -0.8
SRSF1-206ENST00000583741 C4orf26Q17RF5 130 aa10.04□□□□□ -0.8
SRSF1-206ENST00000583741 KRTAP19-6Q3LI70 58 aa9.98□□□□□ -0.81
SRSF1-206ENST00000583741 SPANXA2-OT1Q8N9U9 137 aa9.97□□□□□ -0.81
SRSF1-206ENST00000583741 TMEM258P61165 79 aa9.88□□□□□ -0.83
SRSF1-206ENST00000583741 DMAC1Q96GE9 116 aa9.88□□□□□ -0.83
SRSF1-206ENST00000583741 KRTAP3-1Q9BYR8 98 aa9.88□□□□□ -0.83
SRSF1-206ENST00000583741 A8MUN3 132 aa9.87□□□□□ -0.83
SRSF1-206ENST00000583741 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
SRSF1-206ENST00000583741 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
SRSF1-206ENST00000583741 KRTAP6-3Q3LI67 103 aa9.79□□□□□ -0.84
SRSF1-206ENST00000583741 ACYP2P14621 99 aa9.79□□□□□ -0.84
SRSF1-206ENST00000583741 S4R3F8 94 aa9.68□□□□□ -0.86
SRSF1-206ENST00000583741 COA5Q86WW8 74 aa9.66□□□□□ -0.86
SRSF1-206ENST00000583741 CHKB-CPT1BH3BT56 60 aa9.63□□□□□ -0.87
SRSF1-206ENST00000583741 LCA10Q71F78 164 aa9.63□□□□□ -0.87
SRSF1-206ENST00000583741 NEBP20929 6669 aa9.59□□□□□ -0.87
SRSF1-206ENST00000583741 MUC12Q9UKN1 5478 aa9.57□□□□□ -0.88
SRSF1-206ENST00000583741 SERP1Q9Y6X1 66 aa9.56□□□□□ -0.88
SRSF1-206ENST00000583741 SPTSSBQ8NFR3 76 aa9.51□□□□□ -0.89
SRSF1-206ENST00000583741 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
SRSF1-206ENST00000583741 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.91
SRSF1-206ENST00000583741 A6NN06 94 aa9.34□□□□□ -0.91
SRSF1-206ENST00000583741 KRTAP20-1Q3LI63 56 aa9.3□□□□□ -0.92
SRSF1-206ENST00000583741 MT1BP07438 61 aa9.29□□□□□ -0.92
SRSF1-206ENST00000583741 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
SRSF1-206ENST00000583741 H0YAA0 97 aa9.25□□□□□ -0.93
SRSF1-206ENST00000583741 MDN1Q9NU22 5596 aa9.23□□□□□ -0.93
SRSF1-206ENST00000583741 KMT2DO14686 5537 aa9.23□□□□□ -0.93
SRSF1-206ENST00000583741 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
SRSF1-206ENST00000583741 Q5VV11 94 aa9.2□□□□□ -0.94
SRSF1-206ENST00000583741 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
SRSF1-206ENST00000583741 SEC61GP60059 68 aa9.18□□□□□ -0.94
SRSF1-206ENST00000583741 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
SRSF1-206ENST00000583741 KRTAP19-8Q3LI54 63 aa9.16□□□□□ -0.94
SRSF1-206ENST00000583741 V9GYY9 64 aa9.16□□□□□ -0.94
SRSF1-206ENST00000583741 A0A1B0GU69 56 aa9.15□□□□□ -0.94
SRSF1-206ENST00000583741 KRTAP10-5P60370 271 aa9.15□□□□□ -0.94
SRSF1-206ENST00000583741 Q1T7F1 81 aa9.15□□□□□ -0.94
SRSF1-206ENST00000583741 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.95
SRSF1-206ENST00000583741 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
SRSF1-206ENST00000583741 P0C880 135 aa9.1□□□□□ -0.95
SRSF1-206ENST00000583741 PSPHP1O15172 72 aa9.02□□□□□ -0.97
SRSF1-206ENST00000583741 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
SRSF1-206ENST00000583741 A0A1B0GU33 70 aa8.95□□□□□ -0.98
SRSF1-206ENST00000583741 R4GN34 69 aa8.92□□□□□ -0.98
SRSF1-206ENST00000583741 KRTAP2-3P0C7H8 128 aa8.91□□□□□ -0.98
SRSF1-206ENST00000583741 KRTAP2-4Q9BYR9 128 aa8.91□□□□□ -0.98
SRSF1-206ENST00000583741 M0QZ58 72 aa8.89□□□□□ -0.99
SRSF1-206ENST00000583741 UQCR11O14957 56 aa8.83□□□□□ -1
SRSF1-206ENST00000583741 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
SRSF1-206ENST00000583741 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
SRSF1-206ENST00000583741 SPRR2FQ96RM1 72 aa8.78□□□□□ -1
SRSF1-206ENST00000583741 SPRR2EP22531 72 aa8.76□□□□□ -1.01
SRSF1-206ENST00000583741 SPRR2BP35325 72 aa8.76□□□□□ -1.01
SRSF1-206ENST00000583741 SPRR2AP35326 72 aa8.76□□□□□ -1.01
SRSF1-206ENST00000583741 A6NED7 52 aa8.75□□□□□ -1.01
SRSF1-206ENST00000583741 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
SRSF1-206ENST00000583741 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
SRSF1-206ENST00000583741 A0A0D9SG42 100 aa8.66□□□□□ -1.02
SRSF1-206ENST00000583741 A8MU10 97 aa8.64□□□□□ -1.03
SRSF1-206ENST00000583741 KRTAP2-2Q9BYT5 123 aa8.61□□□□□ -1.03
SRSF1-206ENST00000583741 KRTAP2-1Q9BYU5 128 aa8.61□□□□□ -1.03
SRSF1-206ENST00000583741 LCE1AQ5T7P2 110 aa8.6□□□□□ -1.03
SRSF1-206ENST00000583741 MT1XP80297 61 aa8.59□□□□□ -1.03
SRSF1-206ENST00000583741 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
SRSF1-206ENST00000583741 CDC42SE1Q9NRR8 79 aa8.55□□□□□ -1.04
SRSF1-206ENST00000583741 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
SRSF1-206ENST00000583741 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
SRSF1-206ENST00000583741 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
SRSF1-206ENST00000583741 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
SRSF1-206ENST00000583741 SPRR2DP22532 72 aa8.47□□□□□ -1.05
SRSF1-206ENST00000583741 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
SRSF1-206ENST00000583741 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
SRSF1-206ENST00000583741 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.06
SRSF1-206ENST00000583741 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
SRSF1-206ENST00000583741 K7ERS5 55 aa8.38□□□□□ -1.07
SRSF1-206ENST00000583741 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
SRSF1-206ENST00000583741 LCE3BQ5TA77 95 aa8.28□□□□□ -1.08
SRSF1-206ENST00000583741 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
SRSF1-206ENST00000583741 GPR98Q8WXG9 6306 aa8.18□□□□□ -1.1
SRSF1-206ENST00000583741 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
SRSF1-206ENST00000583741 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
SRSF1-206ENST00000583741 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
SRSF1-206ENST00000583741 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms