RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
SMARCE1-218ENST00000582955 J3QR89 54 aa6□□□□□ -1.45
SMARCE1-218ENST00000582955 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
SMARCE1-218ENST00000582955 LOC101927531A0A1B0GV80 90 aa5.98□□□□□ -1.45
SMARCE1-218ENST00000582955 UQCRQO14949 82 aa5.98□□□□□ -1.45
SMARCE1-218ENST00000582955 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
SMARCE1-218ENST00000582955 H0Y9P7 68 aa5.96□□□□□ -1.46
SMARCE1-218ENST00000582955 S4R3F8 94 aa5.96□□□□□ -1.46
SMARCE1-218ENST00000582955 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
SMARCE1-218ENST00000582955 ATOX1O00244 68 aa5.94□□□□□ -1.46
SMARCE1-218ENST00000582955 USH2AO75445 5202 aa5.94□□□□□ -1.46
SMARCE1-218ENST00000582955 LCA10Q71F78 164 aa5.9□□□□□ -1.46
SMARCE1-218ENST00000582955 CSAG1Q6PB30 78 aa5.89□□□□□ -1.47
SMARCE1-218ENST00000582955 LINC00208Q96KT6 92 aa5.88□□□□□ -1.47
SMARCE1-218ENST00000582955 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
SMARCE1-218ENST00000582955 MP68P56378 58 aa5.86□□□□□ -1.47
SMARCE1-218ENST00000582955 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
SMARCE1-218ENST00000582955 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
SMARCE1-218ENST00000582955 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
SMARCE1-218ENST00000582955 SCGB1A1P11684 91 aa5.84□□□□□ -1.47
SMARCE1-218ENST00000582955 K7ERU9 68 aa5.82□□□□□ -1.48
SMARCE1-218ENST00000582955 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
SMARCE1-218ENST00000582955 A8MUN3 132 aa5.77□□□□□ -1.49
SMARCE1-218ENST00000582955 H3BPC8 53 aa5.77□□□□□ -1.49
SMARCE1-218ENST00000582955 MT-ATP8P03928 68 aa5.77□□□□□ -1.49
SMARCE1-218ENST00000582955 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
SMARCE1-218ENST00000582955 NDUFC1O43677 76 aa5.75□□□□□ -1.49
SMARCE1-218ENST00000582955 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-218ENST00000582955 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
SMARCE1-218ENST00000582955 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
SMARCE1-218ENST00000582955 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
SMARCE1-218ENST00000582955 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
SMARCE1-218ENST00000582955 H3BS24 57 aa5.65□□□□□ -1.5
SMARCE1-218ENST00000582955 DMAC1Q96GE9 116 aa5.65□□□□□ -1.5
SMARCE1-218ENST00000582955 H0YAA0 97 aa5.64□□□□□ -1.51
SMARCE1-218ENST00000582955 Q5VV11 94 aa5.64□□□□□ -1.51
SMARCE1-218ENST00000582955 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
SMARCE1-218ENST00000582955 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
SMARCE1-218ENST00000582955 MT1BP07438 61 aa5.61□□□□□ -1.51
SMARCE1-218ENST00000582955 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
SMARCE1-218ENST00000582955 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
SMARCE1-218ENST00000582955 SNURFQ9Y675 71 aa5.56□□□□□ -1.52
SMARCE1-218ENST00000582955 ACYP2P14621 99 aa5.55□□□□□ -1.52
SMARCE1-218ENST00000582955 A6NN06 94 aa5.53□□□□□ -1.52
SMARCE1-218ENST00000582955 C20orf197Q8N268 126 aa5.52□□□□□ -1.53
SMARCE1-218ENST00000582955 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
SMARCE1-218ENST00000582955 P0C880 135 aa5.49□□□□□ -1.53
SMARCE1-218ENST00000582955 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
SMARCE1-218ENST00000582955 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
SMARCE1-218ENST00000582955 R4GN34 69 aa5.47□□□□□ -1.53
SMARCE1-218ENST00000582955 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
SMARCE1-218ENST00000582955 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
SMARCE1-218ENST00000582955 M0QZ58 72 aa5.44□□□□□ -1.54
SMARCE1-218ENST00000582955 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
SMARCE1-218ENST00000582955 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
SMARCE1-218ENST00000582955 COX7CP15954 63 aa5.38□□□□□ -1.55
SMARCE1-218ENST00000582955 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
SMARCE1-218ENST00000582955 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
SMARCE1-218ENST00000582955 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
SMARCE1-218ENST00000582955 COA5Q86WW8 74 aa5.31□□□□□ -1.56
SMARCE1-218ENST00000582955 MT1XP80297 61 aa5.28□□□□□ -1.56
SMARCE1-218ENST00000582955 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
SMARCE1-218ENST00000582955 H7BZZ5 65 aa5.26□□□□□ -1.57
SMARCE1-218ENST00000582955 ANAPC13Q9BS18 74 aa5.26□□□□□ -1.57
SMARCE1-218ENST00000582955 SEC61GP60059 68 aa5.2□□□□□ -1.58
SMARCE1-218ENST00000582955 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
SMARCE1-218ENST00000582955 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
SMARCE1-218ENST00000582955 CCDC179H3BU77 68 aa5.15□□□□□ -1.59
SMARCE1-218ENST00000582955 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
SMARCE1-218ENST00000582955 MUC12Q9UKN1 5478 aa5.14□□□□□ -1.59
SMARCE1-218ENST00000582955 KMT2DO14686 5537 aa5.13□□□□□ -1.59
SMARCE1-218ENST00000582955 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
SMARCE1-218ENST00000582955 PCP4P48539 62 aa5.12□□□□□ -1.59
SMARCE1-218ENST00000582955 NEBP20929 6669 aa5.11□□□□□ -1.59
SMARCE1-218ENST00000582955 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
SMARCE1-218ENST00000582955 A0A0D9SG42 100 aa5.07□□□□□ -1.6
SMARCE1-218ENST00000582955 A0A1B0GU33 70 aa5.07□□□□□ -1.6
SMARCE1-218ENST00000582955 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
SMARCE1-218ENST00000582955 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
SMARCE1-218ENST00000582955 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
SMARCE1-218ENST00000582955 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
SMARCE1-218ENST00000582955 A0A1B0GU69 56 aa5.05□□□□□ -1.6
SMARCE1-218ENST00000582955 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-218ENST00000582955 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
SMARCE1-218ENST00000582955 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
SMARCE1-218ENST00000582955 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
SMARCE1-218ENST00000582955 SPRR2EP22531 72 aa4.96□□□□□ -1.62
SMARCE1-218ENST00000582955 SPRR2BP35325 72 aa4.96□□□□□ -1.62
SMARCE1-218ENST00000582955 SPRR2AP35326 72 aa4.96□□□□□ -1.62
SMARCE1-218ENST00000582955 TMEM258P61165 79 aa4.96□□□□□ -1.62
SMARCE1-218ENST00000582955 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
SMARCE1-218ENST00000582955 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
SMARCE1-218ENST00000582955 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
SMARCE1-218ENST00000582955 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
SMARCE1-218ENST00000582955 A8MU10 97 aa4.9□□□□□ -1.63
SMARCE1-218ENST00000582955 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
SMARCE1-218ENST00000582955 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
SMARCE1-218ENST00000582955 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
SMARCE1-218ENST00000582955 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SMARCE1-218ENST00000582955 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms