RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 UBL5Q9BZL1 73 aa-0.69□□□□□ -2.52
SMCHD1-207ENST00000581711 KCNQ1DNQ9H478 68 aa-0.69□□□□□ -2.52
SMCHD1-207ENST00000581711 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.69□□□□□ -2.52
SMCHD1-207ENST00000581711 RNF17Q9BXT8 1623 aaKnown RBP-0.69□□□□□ -2.52
SMCHD1-207ENST00000581711 ARHGAP35Q9NRY4 1499 aa-0.69□□□□□ -2.52
SMCHD1-207ENST00000581711 MT2AP02795 61 aa-0.7□□□□□ -2.52
SMCHD1-207ENST00000581711 WT1-ASQ06250 92 aa-0.7□□□□□ -2.52
SMCHD1-207ENST00000581711 S100A13Q99584 98 aa-0.7□□□□□ -2.52
SMCHD1-207ENST00000581711 RALGAPBQ86X10 1494 aa-0.7□□□□□ -2.52
SMCHD1-207ENST00000581711 KIF1AQ12756 1690 aa-0.7□□□□□ -2.52
SMCHD1-207ENST00000581711 H3BUT2 72 aa-0.71□□□□□ -2.52
SMCHD1-207ENST00000581711 CRIP1P50238 77 aa-0.71□□□□□ -2.52
SMCHD1-207ENST00000581711 ABCC1P33527 1531 aa-0.71□□□□□ -2.52
SMCHD1-207ENST00000581711 INO80Q9ULG1 1556 aaPredicted RBP-0.71□□□□□ -2.52
SMCHD1-207ENST00000581711 LRRIQ1Q96JM4 1722 aa-0.72□□□□□ -2.52
SMCHD1-207ENST00000581711 DCAF1Q9Y4B6 1507 aa-0.72□□□□□ -2.52
SMCHD1-207ENST00000581711 MMP24-AS1A0A0U1RRL7 71 aa-0.72□□□□□ -2.52
SMCHD1-207ENST00000581711 KRTAP19-2Q3LHN2 52 aa-0.72□□□□□ -2.52
SMCHD1-207ENST00000581711 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.72□□□□□ -2.52
SMCHD1-207ENST00000581711 NHSQ6T4R5 1651 aa-0.72□□□□□ -2.53
SMCHD1-207ENST00000581711 IGLV5-48A0A075B6I7 105 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 TNP1P09430 55 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 RPS27P42677 84 aaKnown RBP-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 GNG2P59768 71 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 BVES-AS1Q5T3Y7 98 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 MINOS1Q5TGZ0 78 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 CLPSL2Q6UWE3 100 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 RPS27LQ71UM5 84 aaKnown RBP-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 MT1MQ8N339 61 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 LY75O60449 1722 aa-0.73□□□□□ -2.53
SMCHD1-207ENST00000581711 ETDCA0A1B0GVM5 59 aa-0.74□□□□□ -2.53
SMCHD1-207ENST00000581711 CD163L1Q9NR16 1453 aa-0.74□□□□□ -2.53
SMCHD1-207ENST00000581711 CFAP74Q9C0B2 1584 aa-0.74□□□□□ -2.53
SMCHD1-207ENST00000581711 H3BUA1 57 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 ENHOQ6UWT2 76 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 ERVK-7P63135 1459 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 LMTK2Q8IWU2 1503 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 RB1CC1Q8TDY2 1594 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 MYO5CQ9NQX4 1742 aa-0.75□□□□□ -2.53
SMCHD1-207ENST00000581711 C18orf32Q8TCD1 76 aa-0.76□□□□□ -2.53
SMCHD1-207ENST00000581711 DEFB104AQ8WTQ1 72 aa-0.76□□□□□ -2.53
SMCHD1-207ENST00000581711 CDC42BPAQ5VT25 1732 aa-0.76□□□□□ -2.53
SMCHD1-207ENST00000581711 CCDC18Q5T9S5 1454 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 ANKARQ7Z5J8 1434 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 H3BVH4 76 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 MT1GP13640 62 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 MT1XP80297 61 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 NOP10Q9NPE3 64 aaKnown RBP-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 C6orf48Q9UBA6 75 aa-0.77□□□□□ -2.53
SMCHD1-207ENST00000581711 EFCAB6Q5THR3 1501 aa-0.78□□□□□ -2.53
SMCHD1-207ENST00000581711 FCER1GP30273 86 aa-0.78□□□□□ -2.53
SMCHD1-207ENST00000581711 SFTA3P0C7M3 94 aa-0.79□□□□□ -2.54
SMCHD1-207ENST00000581711 NCBP2-AS2Q69YL0 99 aa-0.79□□□□□ -2.54
SMCHD1-207ENST00000581711 C3P01024 1663 aa-0.79□□□□□ -2.54
SMCHD1-207ENST00000581711 DEFB114Q30KQ6 69 aa-0.8□□□□□ -2.54
SMCHD1-207ENST00000581711 MROH1Q8NDA8 1641 aa-0.8□□□□□ -2.54
SMCHD1-207ENST00000581711 ABCC6O95255 1503 aa-0.8□□□□□ -2.54
SMCHD1-207ENST00000581711 ABCA8O94911 1581 aa-0.81□□□□□ -2.54
SMCHD1-207ENST00000581711 MT1EP04732 61 aa-0.81□□□□□ -2.54
SMCHD1-207ENST00000581711 DIP2AQ14689 1571 aa-0.82□□□□□ -2.54
SMCHD1-207ENST00000581711 DNMBPQ6XZF7 1577 aa-0.82□□□□□ -2.54
SMCHD1-207ENST00000581711 MAST1Q9Y2H9 1570 aa-0.82□□□□□ -2.54
SMCHD1-207ENST00000581711 RRBP1Q9P2E9 1410 aaKnown RBP-0.82□□□□□ -2.54
SMCHD1-207ENST00000581711 A0A1B0GUL6 1792 aa-0.83□□□□□ -2.54
SMCHD1-207ENST00000581711 ATXN8Q156A1 80 aa-0.83□□□□□ -2.54
SMCHD1-207ENST00000581711 CDC42BPGQ6DT37 1551 aa-0.83□□□□□ -2.54
SMCHD1-207ENST00000581711 CLASP1Q7Z460 1538 aa-0.84□□□□□ -2.54
SMCHD1-207ENST00000581711 MADDQ8WXG6 1647 aa-0.84□□□□□ -2.54
SMCHD1-207ENST00000581711 M0QY20 66 aa-0.84□□□□□ -2.54
SMCHD1-207ENST00000581711 EEA1Q15075 1411 aa-0.85□□□□□ -2.55
SMCHD1-207ENST00000581711 MT1LQ93083 61 aa-0.85□□□□□ -2.55
SMCHD1-207ENST00000581711 M0QZ58 72 aa-0.86□□□□□ -2.55
SMCHD1-207ENST00000581711 GNG13Q9P2W3 67 aa-0.86□□□□□ -2.55
SMCHD1-207ENST00000581711 HILPDAQ9Y5L2 63 aa-0.86□□□□□ -2.55
SMCHD1-207ENST00000581711 CROCC2H7BZ55 1655 aa-0.87□□□□□ -2.55
SMCHD1-207ENST00000581711 IQGAP3Q86VI3 1631 aa-0.87□□□□□ -2.55
SMCHD1-207ENST00000581711 ABCA9Q8IUA7 1624 aa-0.87□□□□□ -2.55
SMCHD1-207ENST00000581711 A8MTW9 85 aa-0.88□□□□□ -2.55
SMCHD1-207ENST00000581711 TIAM1Q13009 1591 aa-0.88□□□□□ -2.55
SMCHD1-207ENST00000581711 LINC01546A6NGU7 62 aa-0.89□□□□□ -2.55
SMCHD1-207ENST00000581711 K7EMI3 77 aa-0.89□□□□□ -2.55
SMCHD1-207ENST00000581711 ABRACLQ9P1F3 81 aa-0.89□□□□□ -2.55
SMCHD1-207ENST00000581711 UGGT2Q9NYU1 1516 aa-0.89□□□□□ -2.55
SMCHD1-207ENST00000581711 FAM208AQ9UK61 1670 aaKnown RBP-0.9□□□□□ -2.55
SMCHD1-207ENST00000581711 GLI2P10070 1586 aa-0.9□□□□□ -2.55
SMCHD1-207ENST00000581711 DUOX2Q9NRD8 1548 aa-0.9□□□□□ -2.55
SMCHD1-207ENST00000581711 PREX2Q70Z35 1606 aa-0.92□□□□□ -2.56
SMCHD1-207ENST00000581711 LINC01549A6NIU2 74 aa-0.92□□□□□ -2.56
SMCHD1-207ENST00000581711 SPART-AS1P0CW21 52 aa-0.92□□□□□ -2.56
SMCHD1-207ENST00000581711 KAAG1Q9UBP8 84 aa-0.92□□□□□ -2.56
SMCHD1-207ENST00000581711 ALS2Q96Q42 1657 aa-0.92□□□□□ -2.56
SMCHD1-207ENST00000581711 TMEM167BQ9NRX6 74 aa-0.93□□□□□ -2.56
SMCHD1-207ENST00000581711 SMIM27A0A1W2PRY6 76 aa-0.94□□□□□ -2.56
SMCHD1-207ENST00000581711 M0R1W7 72 aa-0.94□□□□□ -2.56
SMCHD1-207ENST00000581711 SERF2P84101 59 aa-0.94□□□□□ -2.56
SMCHD1-207ENST00000581711 SMCO4Q9NRQ5 59 aa-0.94□□□□□ -2.56
SMCHD1-207ENST00000581711 PDCD5O14737 125 aa-0.95□□□□□ -2.56
SMCHD1-207ENST00000581711 ABCA6Q8N139 1617 aa-0.96□□□□□ -2.56
SMCHD1-207ENST00000581711 LINC00308Q8TCZ7 52 aa-0.96□□□□□ -2.56
SMCHD1-207ENST00000581711 NMES1Q9C002 83 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms