RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 H0YAA0 97 aa6.1□□□□□ -1.43
SMARCD2-205ENST00000577686 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
SMARCD2-205ENST00000577686 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
SMARCD2-205ENST00000577686 SPRR2EP22531 72 aa6.08□□□□□ -1.44
SMARCD2-205ENST00000577686 SPRR2BP35325 72 aa6.08□□□□□ -1.44
SMARCD2-205ENST00000577686 SPRR2AP35326 72 aa6.08□□□□□ -1.44
SMARCD2-205ENST00000577686 A8MUN3 132 aa6.07□□□□□ -1.44
SMARCD2-205ENST00000577686 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
SMARCD2-205ENST00000577686 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
SMARCD2-205ENST00000577686 A0A087WVE0 104 aa6.02□□□□□ -1.45
SMARCD2-205ENST00000577686 ACYP1P07311 99 aa6.01□□□□□ -1.45
SMARCD2-205ENST00000577686 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
SMARCD2-205ENST00000577686 ATOX1O00244 68 aa6□□□□□ -1.45
SMARCD2-205ENST00000577686 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
SMARCD2-205ENST00000577686 PRO0461Q9UI25 63 aa6□□□□□ -1.45
SMARCD2-205ENST00000577686 K7EP34 96 aa5.99□□□□□ -1.45
SMARCD2-205ENST00000577686 COL5A1-AS1Q5SY13 56 aa5.98□□□□□ -1.45
SMARCD2-205ENST00000577686 UQCRQO14949 82 aa5.96□□□□□ -1.46
SMARCD2-205ENST00000577686 C20orf197Q8N268 126 aa5.96□□□□□ -1.46
SMARCD2-205ENST00000577686 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
SMARCD2-205ENST00000577686 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
SMARCD2-205ENST00000577686 H0Y9P7 68 aa5.94□□□□□ -1.46
SMARCD2-205ENST00000577686 MT1XP80297 61 aa5.94□□□□□ -1.46
SMARCD2-205ENST00000577686 GTF2H5Q6ZYL4 71 aa5.94□□□□□ -1.46
SMARCD2-205ENST00000577686 R4GN34 69 aa5.93□□□□□ -1.46
SMARCD2-205ENST00000577686 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
SMARCD2-205ENST00000577686 F8W1H4 67 aa5.9□□□□□ -1.46
SMARCD2-205ENST00000577686 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
SMARCD2-205ENST00000577686 ATP5EP2Q5VTU8 51 aa5.9□□□□□ -1.46
SMARCD2-205ENST00000577686 SPRR2DP22532 72 aa5.89□□□□□ -1.47
SMARCD2-205ENST00000577686 HIST1H4AP62805 103 aaKnown RBP5.87□□□□□ -1.47
SMARCD2-205ENST00000577686 ETDBQ3ZM63 59 aa5.87□□□□□ -1.47
SMARCD2-205ENST00000577686 M0QZ58 72 aa5.84□□□□□ -1.47
SMARCD2-205ENST00000577686 MP68P56378 58 aa5.81□□□□□ -1.48
SMARCD2-205ENST00000577686 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
SMARCD2-205ENST00000577686 LOC105371267A0A1B0GV96 52 aa5.78□□□□□ -1.48
SMARCD2-205ENST00000577686 FAM240AA0A1B0GVK7 77 aa5.77□□□□□ -1.49
SMARCD2-205ENST00000577686 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
SMARCD2-205ENST00000577686 P0C880 135 aa5.75□□□□□ -1.49
SMARCD2-205ENST00000577686 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
SMARCD2-205ENST00000577686 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SMARCD2-205ENST00000577686 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
SMARCD2-205ENST00000577686 H3BPC8 53 aa5.68□□□□□ -1.5
SMARCD2-205ENST00000577686 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
SMARCD2-205ENST00000577686 LINC00643Q86TS7 51 aa5.67□□□□□ -1.5
SMARCD2-205ENST00000577686 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
SMARCD2-205ENST00000577686 DMAC1Q96GE9 116 aa5.66□□□□□ -1.5
SMARCD2-205ENST00000577686 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SMARCD2-205ENST00000577686 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
SMARCD2-205ENST00000577686 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
SMARCD2-205ENST00000577686 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
SMARCD2-205ENST00000577686 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
SMARCD2-205ENST00000577686 PCP4L1A6NKN8 68 aa5.53□□□□□ -1.52
SMARCD2-205ENST00000577686 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
SMARCD2-205ENST00000577686 ACYP2P14621 99 aa5.52□□□□□ -1.53
SMARCD2-205ENST00000577686 CHKB-CPT1BH3BT56 60 aa5.46□□□□□ -1.54
SMARCD2-205ENST00000577686 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
SMARCD2-205ENST00000577686 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
SMARCD2-205ENST00000577686 J3QR89 54 aa5.4□□□□□ -1.54
SMARCD2-205ENST00000577686 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
SMARCD2-205ENST00000577686 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
SMARCD2-205ENST00000577686 SMIM20Q8N5G0 67 aa5.33□□□□□ -1.56
SMARCD2-205ENST00000577686 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
SMARCD2-205ENST00000577686 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
SMARCD2-205ENST00000577686 MT1EP04732 61 aa5.3□□□□□ -1.56
SMARCD2-205ENST00000577686 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SMARCD2-205ENST00000577686 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
SMARCD2-205ENST00000577686 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
SMARCD2-205ENST00000577686 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
SMARCD2-205ENST00000577686 MT1GP13640 62 aa5.21□□□□□ -1.58
SMARCD2-205ENST00000577686 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
SMARCD2-205ENST00000577686 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
SMARCD2-205ENST00000577686 SEC61GP60059 68 aa5.19□□□□□ -1.58
SMARCD2-205ENST00000577686 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
SMARCD2-205ENST00000577686 A0A0D9SG42 100 aa5.18□□□□□ -1.58
SMARCD2-205ENST00000577686 A0A1B0GV90 55 aa5.17□□□□□ -1.58
SMARCD2-205ENST00000577686 SERP1Q9Y6X1 66 aa5.16□□□□□ -1.58
SMARCD2-205ENST00000577686 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
SMARCD2-205ENST00000577686 MT4P47944 62 aa5.13□□□□□ -1.59
SMARCD2-205ENST00000577686 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
SMARCD2-205ENST00000577686 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
SMARCD2-205ENST00000577686 MT1MQ8N339 61 aa5.07□□□□□ -1.6
SMARCD2-205ENST00000577686 COA5Q86WW8 74 aa5.04□□□□□ -1.6
SMARCD2-205ENST00000577686 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
SMARCD2-205ENST00000577686 A0A1B0GU33 70 aa5.02□□□□□ -1.61
SMARCD2-205ENST00000577686 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
SMARCD2-205ENST00000577686 MT1LQ93083 61 aa5.02□□□□□ -1.61
SMARCD2-205ENST00000577686 K7ERU9 68 aa5.01□□□□□ -1.61
SMARCD2-205ENST00000577686 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
SMARCD2-205ENST00000577686 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
SMARCD2-205ENST00000577686 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
SMARCD2-205ENST00000577686 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
SMARCD2-205ENST00000577686 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
SMARCD2-205ENST00000577686 TNP1P09430 55 aa4.93□□□□□ -1.62
SMARCD2-205ENST00000577686 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
SMARCD2-205ENST00000577686 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
SMARCD2-205ENST00000577686 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
SMARCD2-205ENST00000577686 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
SMARCD2-205ENST00000577686 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
SMARCD2-205ENST00000577686 A0A1B0GU69 56 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms